RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 LOC100130705A0A1B0GUX0 176 aa-1.78□□□□□ -2.69
SNORA40.9-201ENST00000515895 PYDC1Q8WXC3 89 aa-1.78□□□□□ -2.69
SNORA40.9-201ENST00000515895 CDC42SE2Q9NRR3 84 aa-1.78□□□□□ -2.69
SNORA40.9-201ENST00000515895 CPSF1Q10570 1443 aaKnown RBP-1.78□□□□□ -2.69
SNORA40.9-201ENST00000515895 C1orf167Q5SNV9 1468 aa-1.78□□□□□ -2.69
SNORA40.9-201ENST00000515895 SLIT1O75093 1534 aa-1.78□□□□□ -2.69
SNORA40.9-201ENST00000515895 TET3O43151 1660 aa-1.79□□□□□ -2.7
SNORA40.9-201ENST00000515895 ARHGEF5Q12774 1597 aa-1.79□□□□□ -2.7
SNORA40.9-201ENST00000515895 GRIN2AQ12879 1464 aa-1.79□□□□□ -2.7
SNORA40.9-201ENST00000515895 I3L3M4 83 aa-1.79□□□□□ -2.7
SNORA40.9-201ENST00000515895 UBE2D3P61077 147 aa-1.79□□□□□ -2.7
SNORA40.9-201ENST00000515895 UBE2D2P62837 147 aa-1.79□□□□□ -2.7
SNORA40.9-201ENST00000515895 UQCR10Q9UDW1 63 aa-1.79□□□□□ -2.7
SNORA40.9-201ENST00000515895 COL4A6Q14031 1691 aa-1.8□□□□□ -2.7
SNORA40.9-201ENST00000515895 LRRK2Q5S007 2527 aa-1.8□□□□□ -2.7
SNORA40.9-201ENST00000515895 TROQ12816 1431 aaPredicted RBP-1.8□□□□□ -2.7
SNORA40.9-201ENST00000515895 SEC11AP67812 179 aa-1.8□□□□□ -2.7
SNORA40.9-201ENST00000515895 BTG2P78543 158 aa-1.8□□□□□ -2.7
SNORA40.9-201ENST00000515895 ANP32BQ92688 251 aaKnown RBP-1.8□□□□□ -2.7
SNORA40.9-201ENST00000515895 SMG6Q86US8 1419 aaKnown RBP-1.81□□□□□ -2.7
SNORA40.9-201ENST00000515895 MTORP42345 2549 aa-1.81□□□□□ -2.7
SNORA40.9-201ENST00000515895 DNAH2Q9P225 4427 aa-1.81□□□□□ -2.7
SNORA40.9-201ENST00000515895 COMMD6Q7Z4G1 85 aa-1.81□□□□□ -2.7
SNORA40.9-201ENST00000515895 SNRNP25Q9BV90 132 aaKnown RBP-1.81□□□□□ -2.7
SNORA40.9-201ENST00000515895 LINC00474Q9P2X8 69 aa-1.81□□□□□ -2.7
SNORA40.9-201ENST00000515895 PKD1L2Q7Z442 2459 aa-1.81□□□□□ -2.7
SNORA40.9-201ENST00000515895 VPS13BQ7Z7G8 4022 aa-1.82□□□□□ -2.7
SNORA40.9-201ENST00000515895 GCN1Q92616 2671 aaKnown RBP-1.82□□□□□ -2.7
SNORA40.9-201ENST00000515895 XRN1Q8IZH2 1706 aaKnown RBP-1.82□□□□□ -2.7
SNORA40.9-201ENST00000515895 ARPC4P59998 168 aa-1.82□□□□□ -2.7
SNORA40.9-201ENST00000515895 SMIM21Q3B7S5 101 aa-1.82□□□□□ -2.7
SNORA40.9-201ENST00000515895 MYH7P12883 1935 aa-1.83□□□□□ -2.7
SNORA40.9-201ENST00000515895 A0A1B0GWA3 101 aa-1.83□□□□□ -2.7
SNORA40.9-201ENST00000515895 H3BNG1 76 aa-1.83□□□□□ -2.7
SNORA40.9-201ENST00000515895 C5orf38Q86SI9 138 aa-1.83□□□□□ -2.7
SNORA40.9-201ENST00000515895 C8orf59Q8N0T1 100 aaPredicted RBP-1.83□□□□□ -2.7
SNORA40.9-201ENST00000515895 ARL11Q969Q4 196 aa-1.83□□□□□ -2.7
SNORA40.9-201ENST00000515895 PFDN5Q99471 154 aa-1.83□□□□□ -2.7
SNORA40.9-201ENST00000515895 TCHHQ07283 1943 aa-1.83□□□□□ -2.7
SNORA40.9-201ENST00000515895 DR1Q01658 176 aa-1.84□□□□□ -2.7
SNORA40.9-201ENST00000515895 Q56UQ5 140 aa-1.84□□□□□ -2.7
SNORA40.9-201ENST00000515895 PLEKHH2Q8IVE3 1493 aa-1.84□□□□□ -2.7
SNORA40.9-201ENST00000515895 EHBP1L1Q8N3D4 1523 aa-1.85□□□□□ -2.71
SNORA40.9-201ENST00000515895 MARF1Q9Y4F3 1742 aaKnown RBP-1.85□□□□□ -2.71
SNORA40.9-201ENST00000515895 CCDC168Q8NDH2 2452 aa-1.85□□□□□ -2.71
SNORA40.9-201ENST00000515895 QRICH2Q9H0J4 1663 aa-1.85□□□□□ -2.71
SNORA40.9-201ENST00000515895 A0A1B0GU69 56 aa-1.85□□□□□ -2.71
SNORA40.9-201ENST00000515895 MIF4GDA9UHW6 222 aaKnown RBP-1.85□□□□□ -2.71
SNORA40.9-201ENST00000515895 C9orf153Q5TBE3 101 aa-1.85□□□□□ -2.71
SNORA40.9-201ENST00000515895 HEPN1Q6WQI6 88 aa-1.85□□□□□ -2.71
SNORA40.9-201ENST00000515895 ADGRL2O95490 1459 aa-1.86□□□□□ -2.71
SNORA40.9-201ENST00000515895 MEIG1Q5JSS6 88 aa-1.86□□□□□ -2.71
SNORA40.9-201ENST00000515895 MRPL34Q9BQ48 92 aaKnown RBP-1.86□□□□□ -2.71
SNORA40.9-201ENST00000515895 LINC00846Q9NV44 126 aa-1.86□□□□□ -2.71
SNORA40.9-201ENST00000515895 FAM186AA6NE01 2351 aa-1.86□□□□□ -2.71
SNORA40.9-201ENST00000515895 USP9XQ93008 2570 aaPredicted RBP-1.87□□□□□ -2.71
SNORA40.9-201ENST00000515895 NLRP1Q9C000 1473 aa-1.87□□□□□ -2.71
SNORA40.9-201ENST00000515895 CEP152O94986 1710 aa-1.87□□□□□ -2.71
SNORA40.9-201ENST00000515895 CATR1Q13166 79 aa-1.87□□□□□ -2.71
SNORA40.9-201ENST00000515895 RIF1Q5UIP0 2472 aaKnown RBP-1.87□□□□□ -2.71
SNORA40.9-201ENST00000515895 CDKN2A-AS1Q9UH64 79 aa-1.87□□□□□ -2.71
SNORA40.9-201ENST00000515895 DNAH11Q96DT5 4516 aa-1.87□□□□□ -2.71
SNORA40.9-201ENST00000515895 TRAV30A0A087WSZ9 112 aa-1.88□□□□□ -2.71
SNORA40.9-201ENST00000515895 FAM223BA6NKX1 122 aa-1.88□□□□□ -2.71
SNORA40.9-201ENST00000515895 CCL22O00626 93 aa-1.88□□□□□ -2.71
SNORA40.9-201ENST00000515895 APOC2P02655 101 aa-1.88□□□□□ -2.71
SNORA40.9-201ENST00000515895 LELP1Q5T871 98 aa-1.88□□□□□ -2.71
SNORA40.9-201ENST00000515895 WFDC13Q8IUB5 93 aa-1.88□□□□□ -2.71
SNORA40.9-201ENST00000515895 LAMA3Q16787 3333 aa-1.88□□□□□ -2.71
SNORA40.9-201ENST00000515895 SHROOM2Q13796 1616 aa-1.88□□□□□ -2.71
SNORA40.9-201ENST00000515895 A0A0C4DFX4 3053 aa-1.89□□□□□ -2.71
SNORA40.9-201ENST00000515895 ANK3Q12955 4377 aaKnown RBP-1.89□□□□□ -2.71
SNORA40.9-201ENST00000515895 SAA2P0DJI9 122 aaPredicted RBP-1.89□□□□□ -2.71
SNORA40.9-201ENST00000515895 TRAPPC2P0DI81 140 aa-1.9□□□□□ -2.71
SNORA40.9-201ENST00000515895 TRAPPC2BP0DI82 140 aa-1.9□□□□□ -2.71
SNORA40.9-201ENST00000515895 SNCAP37840 140 aa-1.9□□□□□ -2.71
SNORA40.9-201ENST00000515895 MANBALQ9NQG1 85 aa-1.9□□□□□ -2.71
SNORA40.9-201ENST00000515895 SCN7AQ01118 1682 aa-1.9□□□□□ -2.71
SNORA40.9-201ENST00000515895 EDC4Q6P2E9 1401 aaKnown RBP-1.91□□□□□ -2.71
SNORA40.9-201ENST00000515895 APOBP04114 4563 aaKnown RBP-1.91□□□□□ -2.71
SNORA40.9-201ENST00000515895 CICQ96RK0 1608 aaPredicted RBP-1.91□□□□□ -2.71
SNORA40.9-201ENST00000515895 FAM25AB3EWG3 89 aa-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 FAM25CB3EWG5 89 aa-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 FAM25GB3EWG6 89 aa-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 COX6CP09669 75 aa-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 GNG11P61952 73 aa-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 SFTA2Q6UW10 78 aa-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 C6orf201Q7Z4U5 140 aa-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 HIGD1BQ9P298 99 aa-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 PAIP2BQ9ULR5 123 aaKnown RBP-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 CEP290O15078 2479 aa-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 PLECQ15149 4684 aaKnown RBP-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 DNAH1Q9P2D7 4330 aa-1.91□□□□□ -2.72
SNORA40.9-201ENST00000515895 DSPP15924 2871 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.9-201ENST00000515895 NBEAL2Q6ZNJ1 2754 aa-1.92□□□□□ -2.72
SNORA40.9-201ENST00000515895 PDCD11Q14690 1871 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.9-201ENST00000515895 SELENOWP63302 87 aa-1.92□□□□□ -2.72
SNORA40.9-201ENST00000515895 Q0VG73 95 aa-1.92□□□□□ -2.72
SNORA40.9-201ENST00000515895 NUP188Q5SRE5 1749 aa-1.92□□□□□ -2.72
SNORA40.9-201ENST00000515895 RYR2Q92736 4967 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 493.3 ms