RNA–Protein interactions for RNA: ENST00000515697.5

FAM200B-222, Transcript of family with sequence similarity 200 member B, human

TSL 3

Gene FAM200B, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-222	ENST00000515697	SEC11A	P67812	179 aa		12.32	□□□□□ -0.44
FAM200B-222	ENST00000515697	PACRG	Q96M98	296 aa	Predicted RBP	12.32	□□□□□ -0.44
FAM200B-222	ENST00000515697	IGLV7-43	P04211	117 aa		12.31	□□□□□ -0.44
FAM200B-222	ENST00000515697	S100P	P25815	95 aa		12.31	□□□□□ -0.44
FAM200B-222	ENST00000515697	PRSS2	P07478	247 aa		12.3	□□□□□ -0.44
FAM200B-222	ENST00000515697	SCGB3A1	Q96QR1	104 aa		12.3	□□□□□ -0.44
FAM200B-222	ENST00000515697	TOMM7	Q9P0U1	55 aa		12.3	□□□□□ -0.44
FAM200B-222	ENST00000515697	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.3	□□□□□ -0.44
FAM200B-222	ENST00000515697		M0QXV9	152 aa		12.29	□□□□□ -0.44
FAM200B-222	ENST00000515697	COX19	Q49B96	90 aa		12.29	□□□□□ -0.44
FAM200B-222	ENST00000515697	IGLV5-45	A0A087WSX0	123 aa		12.28	□□□□□ -0.44
FAM200B-222	ENST00000515697	CKS1B	P61024	79 aa		12.28	□□□□□ -0.44
FAM200B-222	ENST00000515697	C6orf226	Q5I0X4	101 aa		12.28	□□□□□ -0.44
FAM200B-222	ENST00000515697	GEMIN7	Q9H840	131 aa	Known RBP	12.28	□□□□□ -0.44
FAM200B-222	ENST00000515697	TINCR	A0A1B0GVN0	87 aa		12.27	□□□□□ -0.45
FAM200B-222	ENST00000515697	LINC01549	A6NIU2	74 aa		12.27	□□□□□ -0.45
FAM200B-222	ENST00000515697	RHEB	Q15382	184 aa		12.27	□□□□□ -0.45
FAM200B-222	ENST00000515697	MRPL18	Q9H0U6	180 aa	Known RBP	12.27	□□□□□ -0.45
FAM200B-222	ENST00000515697	SMIM1	B2RUZ4	78 aa		12.26	□□□□□ -0.45
FAM200B-222	ENST00000515697	CST9L	Q9H4G1	147 aa		12.26	□□□□□ -0.45
FAM200B-222	ENST00000515697		F8VRH5	84 aa		12.25	□□□□□ -0.45
FAM200B-222	ENST00000515697	LCE2D	Q5TA82	110 aa	Predicted RBP	12.25	□□□□□ -0.45
FAM200B-222	ENST00000515697	DIRC1	Q969H9	104 aa		12.25	□□□□□ -0.45
FAM200B-222	ENST00000515697	FABP9	Q0Z7S8	132 aa		12.24	□□□□□ -0.45
FAM200B-222	ENST00000515697	LINC00469	Q8N7U9	141 aa		12.24	□□□□□ -0.45
FAM200B-222	ENST00000515697		H0Y9J4	135 aa		12.23	□□□□□ -0.45
FAM200B-222	ENST00000515697	CXCL5	P42830	114 aa		12.23	□□□□□ -0.45
FAM200B-222	ENST00000515697	PDZD11	Q5EBL8	140 aa		12.23	□□□□□ -0.45
FAM200B-222	ENST00000515697	RPS10P5	Q9NQ39	176 aa		12.23	□□□□□ -0.45
FAM200B-222	ENST00000515697		A0A096LNJ9	63 aa		12.22	□□□□□ -0.45
FAM200B-222	ENST00000515697	FA2H	Q7L5A8	372 aa		12.22	□□□□□ -0.45
FAM200B-222	ENST00000515697	UBE2B	P63146	152 aa		12.21	□□□□□ -0.45
FAM200B-222	ENST00000515697	PMVK	Q15126	192 aa		12.21	□□□□□ -0.45
FAM200B-222	ENST00000515697	URB1-AS1	Q96HZ7	61 aa		12.21	□□□□□ -0.45
FAM200B-222	ENST00000515697	XAGE1A	Q9HD64	81 aa		12.21	□□□□□ -0.45
FAM200B-222	ENST00000515697	KRTAP1-4	P0C5Y4	121 aa		12.2	□□□□□ -0.46
FAM200B-222	ENST00000515697	COX7B2	Q8TF08	81 aa		12.2	□□□□□ -0.46
FAM200B-222	ENST00000515697	C22orf24	Q9Y442	160 aa		12.2	□□□□□ -0.46
FAM200B-222	ENST00000515697	SMCO4	Q9NRQ5	59 aa		12.18	□□□□□ -0.46
FAM200B-222	ENST00000515697	PRR26	Q8N8Z3	221 aa		12.17	□□□□□ -0.46
FAM200B-222	ENST00000515697	C18orf32	Q8TCD1	76 aa		12.17	□□□□□ -0.46
FAM200B-222	ENST00000515697	TP73-AS1	Q9UF72	201 aa		12.17	□□□□□ -0.46
FAM200B-222	ENST00000515697	SPINK8	P0C7L1	97 aa		12.16	□□□□□ -0.46
FAM200B-222	ENST00000515697	IGLC3	P0DOY3	106 aa		12.16	□□□□□ -0.46
FAM200B-222	ENST00000515697	TRAPPC1	Q9Y5R8	145 aa		12.15	□□□□□ -0.46
FAM200B-222	ENST00000515697	IGLV5-39	A0A0G2JS06	123 aa		12.14	□□□□□ -0.47
FAM200B-222	ENST00000515697	LBH	Q53QV2	105 aa	Predicted RBP	12.14	□□□□□ -0.47
FAM200B-222	ENST00000515697	RNF213	Q63HN8	5207 aa		12.13	□□□□□ -0.47
FAM200B-222	ENST00000515697	IGLV1-50	A0A075B6I6	118 aa		12.12	□□□□□ -0.47
FAM200B-222	ENST00000515697	NUPR1	O60356	82 aa		12.12	□□□□□ -0.47
FAM200B-222	ENST00000515697	ZNF861P	O60384	105 aa		12.12	□□□□□ -0.47
FAM200B-222	ENST00000515697	LINC00614	P0C842	121 aa		12.12	□□□□□ -0.47
FAM200B-222	ENST00000515697	MRPL55	Q7Z7F7	128 aa	Known RBP	12.12	□□□□□ -0.47
FAM200B-222	ENST00000515697		H3BRM9	83 aa		12.11	□□□□□ -0.47
FAM200B-222	ENST00000515697	APOC3	P02656	99 aa		12.11	□□□□□ -0.47
FAM200B-222	ENST00000515697	IGLV5-37	A0A075B6J1	123 aa		12.1	□□□□□ -0.47
FAM200B-222	ENST00000515697	HBD	P02042	147 aa		12.1	□□□□□ -0.47
FAM200B-222	ENST00000515697	ZNF22	P17026	224 aa	Predicted RBP	12.1	□□□□□ -0.47
FAM200B-222	ENST00000515697	PMCHL1	Q16048	86 aa		12.1	□□□□□ -0.47
FAM200B-222	ENST00000515697	YPEL4	Q96NS1	127 aa		12.1	□□□□□ -0.47
FAM200B-222	ENST00000515697	LPA	P08519	4548 aa		12.09	□□□□□ -0.47
FAM200B-222	ENST00000515697	SNAPIN	O95295	136 aa		12.08	□□□□□ -0.48
FAM200B-222	ENST00000515697	SVBP	Q8N300	66 aa		12.08	□□□□□ -0.48
FAM200B-222	ENST00000515697	LINC00167	Q96N53	147 aa		12.08	□□□□□ -0.48
FAM200B-222	ENST00000515697	RAB5B	P61020	215 aa		12.07	□□□□□ -0.48
FAM200B-222	ENST00000515697	BCE1	O60756	84 aa		12.06	□□□□□ -0.48
FAM200B-222	ENST00000515697	NDUFA6	P56556	154 aa		12.06	□□□□□ -0.48
FAM200B-222	ENST00000515697	ATP5L	O75964	103 aa		12.05	□□□□□ -0.48
FAM200B-222	ENST00000515697	C11orf86	A6NJI1	115 aa		12.04	□□□□□ -0.48
FAM200B-222	ENST00000515697	NDUFA5	Q16718	116 aa		12.04	□□□□□ -0.48
FAM200B-222	ENST00000515697	RPL37AP8	A6NKH3	93 aa		12.03	□□□□□ -0.48
FAM200B-222	ENST00000515697	RPL13A	P40429	203 aa	Known RBP	12.02	□□□□□ -0.49
FAM200B-222	ENST00000515697	BAGE3	Q86Y29	109 aa		12.02	□□□□□ -0.49
FAM200B-222	ENST00000515697	KRTAP13-1	Q8IUC0	172 aa		12.02	□□□□□ -0.49
FAM200B-222	ENST00000515697	GAGE10	A6NGK3	116 aa		12.01	□□□□□ -0.49
FAM200B-222	ENST00000515697	RPL28	P46779	137 aa	Known RBP	12.01	□□□□□ -0.49
FAM200B-222	ENST00000515697	PFN2	P35080	140 aa		12	□□□□□ -0.49
FAM200B-222	ENST00000515697	ERG28	Q9UKR5	140 aa		12	□□□□□ -0.49
FAM200B-222	ENST00000515697	SCO1	O75880	301 aa		11.99	□□□□□ -0.49
FAM200B-222	ENST00000515697	NKAPP1	Q8N9T2	125 aa		11.99	□□□□□ -0.49
FAM200B-222	ENST00000515697	ZNF625	Q96I27	306 aa	Predicted RBP	11.99	□□□□□ -0.49
FAM200B-222	ENST00000515697	SND1-IT1	Q9HBX3	110 aa		11.99	□□□□□ -0.49
FAM200B-222	ENST00000515697	VPREB1	P12018	145 aa		11.98	□□□□□ -0.49
FAM200B-222	ENST00000515697	COX17	Q14061	63 aa		11.98	□□□□□ -0.49
FAM200B-222	ENST00000515697	CHCHD1	Q96BP2	118 aa	Known RBP	11.98	□□□□□ -0.49
FAM200B-222	ENST00000515697	TRAV12-1	A0A0B4J245	112 aa		11.96	□□□□□ -0.49
FAM200B-222	ENST00000515697	TMEM170B	Q5T4T1	132 aa		11.96	□□□□□ -0.49
FAM200B-222	ENST00000515697		Q8NDZ9	215 aa		11.96	□□□□□ -0.49
FAM200B-222	ENST00000515697	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.96	□□□□□ -0.49
FAM200B-222	ENST00000515697		A0A087X002	238 aa		11.95	□□□□□ -0.5
FAM200B-222	ENST00000515697	SFTA2	Q6UW10	78 aa		11.95	□□□□□ -0.5
FAM200B-222	ENST00000515697	TMEM223	A0PJW6	202 aa		11.94	□□□□□ -0.5
FAM200B-222	ENST00000515697	IFI27L1	Q96BM0	104 aa		11.94	□□□□□ -0.5
FAM200B-222	ENST00000515697	IGKV2-28	A0A075B6P5	120 aa		11.93	□□□□□ -0.5
FAM200B-222	ENST00000515697	IGKV2D-28	P01615	120 aa		11.93	□□□□□ -0.5
FAM200B-222	ENST00000515697	CBLN2	Q8IUK8	224 aa		11.93	□□□□□ -0.5
FAM200B-222	ENST00000515697	RPL24	P83731	157 aa	Known RBP	11.9	□□□□□ -0.5
FAM200B-222	ENST00000515697	CRYGA	P11844	174 aa		11.89	□□□□□ -0.51
FAM200B-222	ENST00000515697	UBE2A	P49459	152 aa		11.89	□□□□□ -0.51
FAM200B-222	ENST00000515697	TMEM238	C9JI98	176 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms