RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 REV3LO60673 3130 aa-1.45□□□□□ -2.64
SMARCA5-203ENST00000515531 RPS25P62851 125 aaKnown RBP-1.45□□□□□ -2.64
SMARCA5-203ENST00000515531 Q8N8P6 123 aa-1.45□□□□□ -2.64
SMARCA5-203ENST00000515531 DPH3Q96FX2 82 aa-1.45□□□□□ -2.64
SMARCA5-203ENST00000515531 ZFHX4Q86UP3 3567 aa-1.45□□□□□ -2.64
SMARCA5-203ENST00000515531 MYOM1P52179 1685 aa-1.45□□□□□ -2.64
SMARCA5-203ENST00000515531 CEP152O94986 1710 aa-1.46□□□□□ -2.64
SMARCA5-203ENST00000515531 KNL1Q8NG31 2342 aa-1.46□□□□□ -2.64
SMARCA5-203ENST00000515531 COPZ2Q9P299 210 aa-1.46□□□□□ -2.64
SMARCA5-203ENST00000515531 DMXL2Q8TDJ6 3036 aa-1.46□□□□□ -2.64
SMARCA5-203ENST00000515531 MYH7P12883 1935 aa-1.46□□□□□ -2.64
SMARCA5-203ENST00000515531 SETBP1Q9Y6X0 1596 aa-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 CFTRP13569 1480 aa-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 GRIN2AQ12879 1464 aa-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 TRBV7-3A0A075B6L6 115 aa-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 LOC285095A0A1B0GVY8 99 aa-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 SFT2D2O95562 160 aa-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 MGPP08493 103 aa-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 HIST1H1DP16402 221 aaKnown RBP-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 MT1MQ8N339 61 aa-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 TMEM263Q8WUH6 116 aaKnown RBP-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 USMG5Q96IX5 58 aa-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 FMN2Q9NZ56 1722 aa-1.47□□□□□ -2.64
SMARCA5-203ENST00000515531 TROQ12816 1431 aaPredicted RBP-1.48□□□□□ -2.65
SMARCA5-203ENST00000515531 HMGN4O00479 90 aa-1.48□□□□□ -2.65
SMARCA5-203ENST00000515531 ARPC5O15511 151 aa-1.48□□□□□ -2.65
SMARCA5-203ENST00000515531 IFNGP01579 166 aa-1.48□□□□□ -2.65
SMARCA5-203ENST00000515531 B2MP61769 119 aa-1.48□□□□□ -2.65
SMARCA5-203ENST00000515531 PDCD10Q9BUL8 212 aa-1.48□□□□□ -2.65
SMARCA5-203ENST00000515531 TRANK1O15050 2925 aa-1.48□□□□□ -2.65
SMARCA5-203ENST00000515531 MYO9AB2RTY4 2548 aa-1.48□□□□□ -2.65
SMARCA5-203ENST00000515531 MAGI1Q96QZ7 1491 aaPredicted RBP-1.49□□□□□ -2.65
SMARCA5-203ENST00000515531 TLN1Q9Y490 2541 aaKnown RBP-1.49□□□□□ -2.65
SMARCA5-203ENST00000515531 LINC00959A0A1B0GUT2 108 aa-1.49□□□□□ -2.65
SMARCA5-203ENST00000515531 MT2AP02795 61 aa-1.49□□□□□ -2.65
SMARCA5-203ENST00000515531 DEFB1P60022 68 aa-1.49□□□□□ -2.65
SMARCA5-203ENST00000515531 MYO15AQ9UKN7 3530 aa-1.49□□□□□ -2.65
SMARCA5-203ENST00000515531 ATMQ13315 3056 aa-1.49□□□□□ -2.65
SMARCA5-203ENST00000515531 HMGXB3Q12766 1538 aa-1.5□□□□□ -2.65
SMARCA5-203ENST00000515531 ADGRG4Q8IZF6 3080 aa-1.5□□□□□ -2.65
SMARCA5-203ENST00000515531 LRBAP50851 2863 aa-1.5□□□□□ -2.65
SMARCA5-203ENST00000515531 C10orf113Q5VZT2 155 aa-1.5□□□□□ -2.65
SMARCA5-203ENST00000515531 PAPPA2Q9BXP8 1791 aa-1.5□□□□□ -2.65
SMARCA5-203ENST00000515531 ADAMTS12P58397 1594 aa-1.51□□□□□ -2.65
SMARCA5-203ENST00000515531 ANP32BQ92688 251 aaKnown RBP-1.51□□□□□ -2.65
SMARCA5-203ENST00000515531 TSLPQ969D9 159 aa-1.51□□□□□ -2.65
SMARCA5-203ENST00000515531 LSM10Q969L4 123 aaKnown RBP-1.51□□□□□ -2.65
SMARCA5-203ENST00000515531 RERGLQ9H628 205 aa-1.51□□□□□ -2.65
SMARCA5-203ENST00000515531 FAIMQ9NVQ4 179 aa-1.51□□□□□ -2.65
SMARCA5-203ENST00000515531 APLNQ9ULZ1 77 aa-1.51□□□□□ -2.65
SMARCA5-203ENST00000515531 SERP1Q9Y6X1 66 aa-1.51□□□□□ -2.65
SMARCA5-203ENST00000515531 FAM186AA6NE01 2351 aa-1.51□□□□□ -2.65
SMARCA5-203ENST00000515531 RANBP2P49792 3224 aaKnown RBP-1.51□□□□□ -2.65
SMARCA5-203ENST00000515531 H3BNG1 76 aa-1.52□□□□□ -2.65
SMARCA5-203ENST00000515531 MT1EP04732 61 aa-1.52□□□□□ -2.65
SMARCA5-203ENST00000515531 SMIM21Q3B7S5 101 aa-1.52□□□□□ -2.65
SMARCA5-203ENST00000515531 MRPL54Q6P161 138 aaKnown RBP-1.52□□□□□ -2.65
SMARCA5-203ENST00000515531 MT1LQ93083 61 aa-1.52□□□□□ -2.65
SMARCA5-203ENST00000515531 ARHGEF5Q12774 1597 aa-1.52□□□□□ -2.65
SMARCA5-203ENST00000515531 SPTBN5Q9NRC6 3674 aaKnown RBP-1.52□□□□□ -2.65
SMARCA5-203ENST00000515531 A0A0G2JMZ2 1700 aa-1.53□□□□□ -2.65
SMARCA5-203ENST00000515531 WHAMMP3Q1A5X7 153 aa-1.53□□□□□ -2.65
SMARCA5-203ENST00000515531 AKAP14Q86UN6 197 aa-1.53□□□□□ -2.65
SMARCA5-203ENST00000515531 BOD1L1Q8NFC6 3051 aa-1.53□□□□□ -2.65
SMARCA5-203ENST00000515531 SPRR4Q96PI1 79 aa-1.53□□□□□ -2.65
SMARCA5-203ENST00000515531 PTPN23Q9H3S7 1636 aa-1.53□□□□□ -2.65
SMARCA5-203ENST00000515531 CPSF1Q10570 1443 aaKnown RBP-1.54□□□□□ -2.66
SMARCA5-203ENST00000515531 UBA52P62987 128 aaKnown RBP-1.54□□□□□ -2.66
SMARCA5-203ENST00000515531 PPP3R2Q96LZ3 170 aa-1.54□□□□□ -2.66
SMARCA5-203ENST00000515531 NAA60Q9H7X0 242 aa-1.54□□□□□ -2.66
SMARCA5-203ENST00000515531 NXT2Q9NPJ8 142 aaKnown RBP-1.54□□□□□ -2.66
SMARCA5-203ENST00000515531 SHROOM2Q13796 1616 aa-1.55□□□□□ -2.66
SMARCA5-203ENST00000515531 CPSF4LA6NMK7 179 aaKnown RBP-1.55□□□□□ -2.66
SMARCA5-203ENST00000515531 FDCSPQ8NFU4 85 aa-1.55□□□□□ -2.66
SMARCA5-203ENST00000515531 PFDN5Q99471 154 aa-1.55□□□□□ -2.66
SMARCA5-203ENST00000515531 BPTFQ12830 3046 aa-1.56□□□□□ -2.66
SMARCA5-203ENST00000515531 SMR3BP02814 79 aaPredicted RBP-1.56□□□□□ -2.66
SMARCA5-203ENST00000515531 IGLC1P0CG04 106 aa-1.56□□□□□ -2.66
SMARCA5-203ENST00000515531 ARPC4P59998 168 aa-1.56□□□□□ -2.66
SMARCA5-203ENST00000515531 LINC01600Q96MT4 127 aa-1.56□□□□□ -2.66
SMARCA5-203ENST00000515531 SNRNP25Q9BV90 132 aaKnown RBP-1.56□□□□□ -2.66
SMARCA5-203ENST00000515531 SPANXDQ9BXN6 97 aa-1.56□□□□□ -2.66
SMARCA5-203ENST00000515531 TLN2Q9Y4G6 2542 aa-1.57□□□□□ -2.66
SMARCA5-203ENST00000515531 SMG6Q86US8 1419 aaKnown RBP-1.57□□□□□ -2.66
SMARCA5-203ENST00000515531 XRN1Q8IZH2 1706 aaKnown RBP-1.57□□□□□ -2.66
SMARCA5-203ENST00000515531 TET3O43151 1660 aa-1.57□□□□□ -2.66
SMARCA5-203ENST00000515531 QRICH2Q9H0J4 1663 aa-1.57□□□□□ -2.66
SMARCA5-203ENST00000515531 FAM167A-AS1Q96KT0 104 aa-1.57□□□□□ -2.66
SMARCA5-203ENST00000515531 KNDC1Q76NI1 1749 aa-1.57□□□□□ -2.66
SMARCA5-203ENST00000515531 CEP290O15078 2479 aa-1.58□□□□□ -2.66
SMARCA5-203ENST00000515531 SSSCA1O60232 199 aa-1.58□□□□□ -2.66
SMARCA5-203ENST00000515531 DR1Q01658 176 aa-1.58□□□□□ -2.66
SMARCA5-203ENST00000515531 C9orf62Q8N4C0 152 aa-1.58□□□□□ -2.66
SMARCA5-203ENST00000515531 PRO1933Q9H354 126 aa-1.58□□□□□ -2.66
SMARCA5-203ENST00000515531 CHKB-CPT1BH3BT56 60 aa-1.59□□□□□ -2.66
SMARCA5-203ENST00000515531 K7EP34 96 aa-1.59□□□□□ -2.66
SMARCA5-203ENST00000515531 MYOZ3Q8TDC0 251 aa-1.59□□□□□ -2.66
SMARCA5-203ENST00000515531 UQCR10Q9UDW1 63 aa-1.59□□□□□ -2.66
SMARCA5-203ENST00000515531 PAIP2BQ9ULR5 123 aaKnown RBP-1.59□□□□□ -2.66
SMARCA5-203ENST00000515531 CCDC141Q6ZP82 1450 aa-1.59□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 594 ms