RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 IGKV2D-24A0A075B6R9 120 aa6.12□□□□□ -1.43
CPNE4-213ENST00000515418 K7ERJ3 54 aa6.12□□□□□ -1.43
CPNE4-213ENST00000515418 KIAA0087Q14695 138 aa6.12□□□□□ -1.43
CPNE4-213ENST00000515418 LBHQ53QV2 105 aaPredicted RBP6.12□□□□□ -1.43
CPNE4-213ENST00000515418 MUSTN1Q8IVN3 82 aa6.12□□□□□ -1.43
CPNE4-213ENST00000515418 C6orf223Q8N319 242 aa6.12□□□□□ -1.43
CPNE4-213ENST00000515418 KLK5Q9Y337 293 aaPredicted RBP6.12□□□□□ -1.43
CPNE4-213ENST00000515418 VPS13DQ5THJ4 4388 aa6.11□□□□□ -1.43
CPNE4-213ENST00000515418 NUPR2A6NF83 97 aa6.11□□□□□ -1.43
CPNE4-213ENST00000515418 SMIM13P0DJ93 91 aa6.11□□□□□ -1.43
CPNE4-213ENST00000515418 UBE2DNLQ8IWF7 75 aa6.11□□□□□ -1.43
CPNE4-213ENST00000515418 RAB37Q96AX2 223 aa6.11□□□□□ -1.43
CPNE4-213ENST00000515418 UPK3BQ9BT76 320 aa6.11□□□□□ -1.43
CPNE4-213ENST00000515418 SPANXB1Q9NS25 103 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-213ENST00000515418 NHP2Q9NX24 153 aaKnown RBP6.11□□□□□ -1.43
CPNE4-213ENST00000515418 TMEM238C9JI98 176 aa6.11□□□□□ -1.43
CPNE4-213ENST00000515418 MEIG1Q5JSS6 88 aa6.11□□□□□ -1.43
CPNE4-213ENST00000515418 LINC01561Q8N1V8 128 aa6.11□□□□□ -1.43
CPNE4-213ENST00000515418 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
CPNE4-213ENST00000515418 A6NJY4 79 aa6.1□□□□□ -1.43
CPNE4-213ENST00000515418 IBA57-AS1B1ANH7 110 aa6.1□□□□□ -1.43
CPNE4-213ENST00000515418 TAX1BP3O14907 124 aa6.1□□□□□ -1.43
CPNE4-213ENST00000515418 Q8IZM0 81 aa6.1□□□□□ -1.43
CPNE4-213ENST00000515418 NAA38Q9BRA0 125 aaKnown RBP6.1□□□□□ -1.43
CPNE4-213ENST00000515418 KRTAP1-5Q9BYS1 174 aa6.1□□□□□ -1.43
CPNE4-213ENST00000515418 A6NDN8 102 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 PFN2P35080 140 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 CKS1BP61024 79 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 HIGD2BQ4VC39 106 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 C9orf116Q5BN46 136 aaPredicted RBP6.09□□□□□ -1.43
CPNE4-213ENST00000515418 CASC10Q5T4H9 136 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 C10orf25Q5T742 122 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 A4D1N5 150 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 HERV-K104P63124 156 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 CIRBPQ14011 172 aaKnown RBP6.09□□□□□ -1.43
CPNE4-213ENST00000515418 CFAP161Q6P656 301 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 UNQ6190/PRO20217Q6UXQ8 127 aa6.09□□□□□ -1.43
CPNE4-213ENST00000515418 KMT2AQ03164 3969 aa6.08□□□□□ -1.44
CPNE4-213ENST00000515418 TIMM17BO60830 172 aa6.08□□□□□ -1.44
CPNE4-213ENST00000515418 APOMO95445 188 aa6.08□□□□□ -1.44
CPNE4-213ENST00000515418 LINC00158P58513 81 aa6.08□□□□□ -1.44
CPNE4-213ENST00000515418 SPAG11BQ08648 103 aa6.08□□□□□ -1.44
CPNE4-213ENST00000515418 SPANXDQ9BXN6 97 aa6.08□□□□□ -1.44
CPNE4-213ENST00000515418 SPANXCQ9NY87 97 aa6.08□□□□□ -1.44
CPNE4-213ENST00000515418 CFC1BP0CG36 223 aa6.07□□□□□ -1.44
CPNE4-213ENST00000515418 CFC1P0CG37 223 aa6.07□□□□□ -1.44
CPNE4-213ENST00000515418 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
CPNE4-213ENST00000515418 MIR7-3HGQ8N6C7 128 aa6.07□□□□□ -1.44
CPNE4-213ENST00000515418 C15orf56Q8N910 161 aa6.07□□□□□ -1.44
CPNE4-213ENST00000515418 LINC00308Q8TCZ7 52 aa6.07□□□□□ -1.44
CPNE4-213ENST00000515418 LECT2O14960 151 aa6.06□□□□□ -1.44
CPNE4-213ENST00000515418 RPL24P83731 157 aaKnown RBP6.06□□□□□ -1.44
CPNE4-213ENST00000515418 ERG28Q9UKR5 140 aa6.06□□□□□ -1.44
CPNE4-213ENST00000515418 COX11Q9Y6N1 276 aa6.06□□□□□ -1.44
CPNE4-213ENST00000515418 ZNF561-AS1K7EIQ3 104 aa6.06□□□□□ -1.44
CPNE4-213ENST00000515418 MUC7Q8TAX7 377 aa6.06□□□□□ -1.44
CPNE4-213ENST00000515418 NTN5Q8WTR8 489 aaPredicted RBP6.06□□□□□ -1.44
CPNE4-213ENST00000515418 A0A1B0GWB2 263 aa6.05□□□□□ -1.44
CPNE4-213ENST00000515418 H3BUT2 72 aa6.05□□□□□ -1.44
CPNE4-213ENST00000515418 M0R2N4 97 aa6.04□□□□□ -1.44
CPNE4-213ENST00000515418 SFTA2Q6UW10 78 aa6.04□□□□□ -1.44
CPNE4-213ENST00000515418 C9orf118A6NHY6 69 aa6.04□□□□□ -1.44
CPNE4-213ENST00000515418 IFITM1P13164 125 aa6.04□□□□□ -1.44
CPNE4-213ENST00000515418 CXCL5P42830 114 aa6.04□□□□□ -1.44
CPNE4-213ENST00000515418 USP17L23D6RBM5 183 aa6.03□□□□□ -1.44
CPNE4-213ENST00000515418 H7C2G1 150 aa6.03□□□□□ -1.44
CPNE4-213ENST00000515418 Q6ZRU5 148 aa6.03□□□□□ -1.44
CPNE4-213ENST00000515418 CAMK2N2Q96S95 79 aa6.03□□□□□ -1.44
CPNE4-213ENST00000515418 C6orf48Q9UBA6 75 aa6.03□□□□□ -1.44
CPNE4-213ENST00000515418 DNAH2Q9P225 4427 aa6.03□□□□□ -1.44
CPNE4-213ENST00000515418 NBDYA0A0U1RRE5 68 aa6.02□□□□□ -1.45
CPNE4-213ENST00000515418 WFDC2Q14508 124 aa6.02□□□□□ -1.45
CPNE4-213ENST00000515418 RMI2Q96E14 147 aa6.02□□□□□ -1.45
CPNE4-213ENST00000515418 WWC2-AS2Q96NR7 200 aa6.02□□□□□ -1.45
CPNE4-213ENST00000515418 PGPEP1Q9NXJ5 209 aa6.02□□□□□ -1.45
CPNE4-213ENST00000515418 PRO1854Q9UHT4 67 aa6.02□□□□□ -1.45
CPNE4-213ENST00000515418 SLPIP03973 132 aa6.02□□□□□ -1.45
CPNE4-213ENST00000515418 GVQW2A0A096LPI5 108 aaPredicted RBP6.01□□□□□ -1.45
CPNE4-213ENST00000515418 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.01□□□□□ -1.45
CPNE4-213ENST00000515418 TSPAN13O95857 204 aa6.01□□□□□ -1.45
CPNE4-213ENST00000515418 PRR3P79522 188 aaKnown RBP6.01□□□□□ -1.45
CPNE4-213ENST00000515418 VAMP3Q15836 100 aa6.01□□□□□ -1.45
CPNE4-213ENST00000515418 PSCAO43653 123 aa6□□□□□ -1.45
CPNE4-213ENST00000515418 COX17Q14061 63 aa6□□□□□ -1.45
CPNE4-213ENST00000515418 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
CPNE4-213ENST00000515418 A0A0B4J2C4 111 aa6□□□□□ -1.45
CPNE4-213ENST00000515418 C2orf48Q96LS8 159 aa6□□□□□ -1.45
CPNE4-213ENST00000515418 A0A1W2PPM0 123 aa5.99□□□□□ -1.45
CPNE4-213ENST00000515418 SYCNQ0VAF6 134 aa5.99□□□□□ -1.45
CPNE4-213ENST00000515418 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
CPNE4-213ENST00000515418 Q8NDZ9 215 aa5.99□□□□□ -1.45
CPNE4-213ENST00000515418 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
CPNE4-213ENST00000515418 XAGE1AQ9HD64 81 aa5.99□□□□□ -1.45
CPNE4-213ENST00000515418 HYDINQ4G0P3 5121 aa5.99□□□□□ -1.45
CPNE4-213ENST00000515418 IGKV2-28A0A075B6P5 120 aa5.98□□□□□ -1.45
CPNE4-213ENST00000515418 LY6G6CO95867 125 aa5.98□□□□□ -1.45
CPNE4-213ENST00000515418 IGKV2D-28P01615 120 aa5.98□□□□□ -1.45
CPNE4-213ENST00000515418 COPS9Q8WXC6 57 aa5.98□□□□□ -1.45
CPNE4-213ENST00000515418 LOC107984156A0A0G2JMH3 177 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms