RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 LINC00173Q6ZV60 143 aa8.9□□□□□ -0.98
DDR1-278ENST00000515233 C10orf91Q5T1B1 145 aa8.89□□□□□ -0.99
DDR1-278ENST00000515233 C2orf66Q6UXQ4 117 aa8.89□□□□□ -0.99
DDR1-278ENST00000515233 VCX2Q9H322 139 aa8.89□□□□□ -0.99
DDR1-278ENST00000515233 CYSLTR1Q9Y271 337 aa8.89□□□□□ -0.99
DDR1-278ENST00000515233 LOC389332A0A1B0GUA5 103 aa8.88□□□□□ -0.99
DDR1-278ENST00000515233 ZC2HC1BQ5TFG8 222 aa8.88□□□□□ -0.99
DDR1-278ENST00000515233 LINC00469Q8N7U9 141 aa8.88□□□□□ -0.99
DDR1-278ENST00000515233 Q8N8P6 123 aa8.88□□□□□ -0.99
DDR1-278ENST00000515233 CTDSP1Q9GZU7 261 aa8.88□□□□□ -0.99
DDR1-278ENST00000515233 MAP1LC3AQ9H492 121 aa8.88□□□□□ -0.99
DDR1-278ENST00000515233 TOMM7Q9P0U1 55 aa8.88□□□□□ -0.99
DDR1-278ENST00000515233 TP73-AS1Q9UF72 201 aa8.88□□□□□ -0.99
DDR1-278ENST00000515233 IGIPA6NJ69 53 aa8.87□□□□□ -0.99
DDR1-278ENST00000515233 K7EMI3 77 aa8.87□□□□□ -0.99
DDR1-278ENST00000515233 TSPAN13O95857 204 aa8.87□□□□□ -0.99
DDR1-278ENST00000515233 ALKBH7Q9BT30 221 aaPredicted RBP8.87□□□□□ -0.99
DDR1-278ENST00000515233 XAGE1AQ9HD64 81 aa8.87□□□□□ -0.99
DDR1-278ENST00000515233 A0A087X002 238 aa8.86□□□□□ -0.99
DDR1-278ENST00000515233 SEC11AP67812 179 aa8.86□□□□□ -0.99
DDR1-278ENST00000515233 ORMDL2Q53FV1 153 aa8.86□□□□□ -0.99
DDR1-278ENST00000515233 F8VRH5 84 aa8.85□□□□□ -0.99
DDR1-278ENST00000515233 RPL28P46779 137 aaKnown RBP8.85□□□□□ -0.99
DDR1-278ENST00000515233 HERVK_113P63121 156 aa8.85□□□□□ -0.99
DDR1-278ENST00000515233 MRPL55Q7Z7F7 128 aaKnown RBP8.85□□□□□ -0.99
DDR1-278ENST00000515233 BCE1O60756 84 aa8.84□□□□□ -0.99
DDR1-278ENST00000515233 CRYGAP11844 174 aa8.84□□□□□ -0.99
DDR1-278ENST00000515233 PAPPA-AS1Q5QFB9 102 aa8.84□□□□□ -0.99
DDR1-278ENST00000515233 TYMSOSQ8TAI1 123 aa8.84□□□□□ -0.99
DDR1-278ENST00000515233 CDKN2A-AS1Q9UH64 79 aa8.84□□□□□ -0.99
DDR1-278ENST00000515233 KRTAP9-2Q9BYQ4 174 aa8.83□□□□□ -1
DDR1-278ENST00000515233 CXCL5P42830 114 aa8.82□□□□□ -1
DDR1-278ENST00000515233 SCO1O75880 301 aa8.81□□□□□ -1
DDR1-278ENST00000515233 ADCYAP1P18509 176 aa8.81□□□□□ -1
DDR1-278ENST00000515233 G0S2P27469 103 aa8.81□□□□□ -1
DDR1-278ENST00000515233 LINC00167Q96N53 147 aa8.81□□□□□ -1
DDR1-278ENST00000515233 TIMM17AQ99595 171 aa8.81□□□□□ -1
DDR1-278ENST00000515233 NXT2Q9NPJ8 142 aaKnown RBP8.81□□□□□ -1
DDR1-278ENST00000515233 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
DDR1-278ENST00000515233 GEMIN7Q9H840 131 aaKnown RBP8.8□□□□□ -1
DDR1-278ENST00000515233 RHEBQ15382 184 aa8.79□□□□□ -1
DDR1-278ENST00000515233 ANAPC16Q96DE5 110 aa8.79□□□□□ -1
DDR1-278ENST00000515233 RPL37AP8A6NKH3 93 aa8.78□□□□□ -1
DDR1-278ENST00000515233 PNRC1Q12796 327 aaPredicted RBP8.78□□□□□ -1
DDR1-278ENST00000515233 TOMM6Q96B49 74 aa8.78□□□□□ -1
DDR1-278ENST00000515233 SMCO4Q9NRQ5 59 aa8.78□□□□□ -1
DDR1-278ENST00000515233 TMA7Q9Y2S6 64 aaKnown RBP8.78□□□□□ -1
DDR1-278ENST00000515233 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
DDR1-278ENST00000515233 SMIM1B2RUZ4 78 aa8.77□□□□□ -1.01
DDR1-278ENST00000515233 MT-ND4LP03901 98 aa8.77□□□□□ -1.01
DDR1-278ENST00000515233 KRTAP13-2Q52LG2 175 aa8.77□□□□□ -1.01
DDR1-278ENST00000515233 PDZD11Q5EBL8 140 aa8.77□□□□□ -1.01
DDR1-278ENST00000515233 KRTAP13-1Q8IUC0 172 aa8.77□□□□□ -1.01
DDR1-278ENST00000515233 ANAPC11Q9NYG5 84 aa8.77□□□□□ -1.01
DDR1-278ENST00000515233 FAM229BQ4G0N7 80 aa8.76□□□□□ -1.01
DDR1-278ENST00000515233 ERASQ7Z444 233 aa8.76□□□□□ -1.01
DDR1-278ENST00000515233 IGLV5-45A0A087WSX0 123 aa8.75□□□□□ -1.01
DDR1-278ENST00000515233 TINCRA0A1B0GVN0 87 aa8.75□□□□□ -1.01
DDR1-278ENST00000515233 CTAG1AP78358 180 aa8.75□□□□□ -1.01
DDR1-278ENST00000515233 COX7B2Q8TF08 81 aa8.75□□□□□ -1.01
DDR1-278ENST00000515233 FAT4Q6V0I7 4981 aa8.75□□□□□ -1.01
DDR1-278ENST00000515233 GAGE10A6NGK3 116 aa8.74□□□□□ -1.01
DDR1-278ENST00000515233 RPS10P5Q9NQ39 176 aa8.74□□□□□ -1.01
DDR1-278ENST00000515233 UBE2AP49459 152 aa8.73□□□□□ -1.01
DDR1-278ENST00000515233 SCGB3A1Q96QR1 104 aa8.73□□□□□ -1.01
DDR1-278ENST00000515233 LINC01549A6NIU2 74 aa8.72□□□□□ -1.01
DDR1-278ENST00000515233 RAB5BP61020 215 aa8.72□□□□□ -1.01
DDR1-278ENST00000515233 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
DDR1-278ENST00000515233 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
DDR1-278ENST00000515233 NKAPP1Q8N9T2 125 aa8.72□□□□□ -1.01
DDR1-278ENST00000515233 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.02
DDR1-278ENST00000515233 MUC17Q685J3 4493 aa8.7□□□□□ -1.02
DDR1-278ENST00000515233 LINC01546A6NGU7 62 aa8.69□□□□□ -1.02
DDR1-278ENST00000515233 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
DDR1-278ENST00000515233 CDIP1Q9H305 208 aa8.69□□□□□ -1.02
DDR1-278ENST00000515233 CST9LQ9H4G1 147 aa8.69□□□□□ -1.02
DDR1-278ENST00000515233 IGKV2-28A0A075B6P5 120 aa8.68□□□□□ -1.02
DDR1-278ENST00000515233 IGKV2D-26A0A0A0MRZ7 120 aa8.68□□□□□ -1.02
DDR1-278ENST00000515233 IGKV2D-28P01615 120 aa8.68□□□□□ -1.02
DDR1-278ENST00000515233 SPINK8P0C7L1 97 aa8.68□□□□□ -1.02
DDR1-278ENST00000515233 CBLN2Q8IUK8 224 aa8.68□□□□□ -1.02
DDR1-278ENST00000515233 MRPL18Q9H0U6 180 aaKnown RBP8.68□□□□□ -1.02
DDR1-278ENST00000515233 IGLV7-46A0A075B6I9 117 aa8.67□□□□□ -1.02
DDR1-278ENST00000515233 ATP5LO75964 103 aa8.67□□□□□ -1.02
DDR1-278ENST00000515233 LOC105371267A0A1B0GV96 52 aa8.66□□□□□ -1.02
DDR1-278ENST00000515233 COLCA2A8K830 154 aa8.66□□□□□ -1.02
DDR1-278ENST00000515233 PMVKQ15126 192 aa8.66□□□□□ -1.02
DDR1-278ENST00000515233 H3BRM9 83 aa8.65□□□□□ -1.02
DDR1-278ENST00000515233 VPREB1P12018 145 aa8.65□□□□□ -1.02
DDR1-278ENST00000515233 PRLHP81277 87 aa8.65□□□□□ -1.02
DDR1-278ENST00000515233 PLEKHB2Q96CS7 222 aa8.65□□□□□ -1.02
DDR1-278ENST00000515233 TMEM126AQ9H061 195 aa8.65□□□□□ -1.02
DDR1-278ENST00000515233 TRAV9-1A0A075B6T8 112 aa8.64□□□□□ -1.03
DDR1-278ENST00000515233 PFN2P35080 140 aa8.64□□□□□ -1.03
DDR1-278ENST00000515233 FAM19A1Q7Z5A9 133 aa8.64□□□□□ -1.03
DDR1-278ENST00000515233 IGLV5-39A0A0G2JS06 123 aa8.63□□□□□ -1.03
DDR1-278ENST00000515233 S100PP25815 95 aa8.63□□□□□ -1.03
DDR1-278ENST00000515233 RPL24P83731 157 aaKnown RBP8.63□□□□□ -1.03
DDR1-278ENST00000515233 COX17Q14061 63 aa8.63□□□□□ -1.03
DDR1-278ENST00000515233 TMEM238C9JI98 176 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms