RNA–Protein interactions for RNA: ENST00000515149.2

ATR-208, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-208ENST00000515149 ACTR3CQ9C0K3 210 aaPredicted RBP1.78□□□□□ -2.12
ATR-208ENST00000515149 SMDT1Q9H4I9 107 aa1.78□□□□□ -2.12
ATR-208ENST00000515149 NDUFA12Q9UI09 145 aa1.78□□□□□ -2.12
ATR-208ENST00000515149 UBE2D4Q9Y2X8 147 aa1.78□□□□□ -2.12
ATR-208ENST00000515149 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
ATR-208ENST00000515149 A0A1B0GWB2 263 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 XKRY2A2RUG3 117 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 C1orf196B1AJZ1 125 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 BCE1O60756 84 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 TMEM241Q24JQ0 296 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 KRTAP19-2Q3LHN2 52 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 SPAG11AQ6PDA7 123 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 ORAOV1Q8WV07 137 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 MRAP2Q96G30 205 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 HIST1H4GQ99525 98 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 PSMG3Q9BT73 122 aaPredicted RBP1.77□□□□□ -2.13
ATR-208ENST00000515149 CCDC32Q9BV29 185 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 ALG5Q9Y673 324 aa1.77□□□□□ -2.13
ATR-208ENST00000515149 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
ATR-208ENST00000515149 TRAV13-1A0A0B4J241 112 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 CCDC160A6NGH7 325 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 NDUFC2-KCTD14E9PQ53 114 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 I3L3M4 83 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 LYRM1O43325 122 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 SIX6O95475 246 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 S100A9P06702 114 aaKnown RBP1.76□□□□□ -2.13
ATR-208ENST00000515149 IL7P13232 177 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 UBE2AP49459 152 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 RPS20P60866 119 aaKnown RBP1.76□□□□□ -2.13
ATR-208ENST00000515149 SERF2P84101 59 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 SMAGPQ0VAQ4 97 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 C5orf38Q86SI9 138 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 MRPL52Q86TS9 123 aaKnown RBP1.76□□□□□ -2.13
ATR-208ENST00000515149 DAND5Q8N907 189 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 PPP1R1CQ8WVI7 109 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 WFDC1Q9HC57 220 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 CDC42SE2Q9NRR3 84 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 C6orf48Q9UBA6 75 aa1.76□□□□□ -2.13
ATR-208ENST00000515149 TRBV30A0A0K0K1B3 111 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 CTXND1A0A1B0GTU2 59 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 C7orf77A4D0Y5 90 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 RAB19A4D1S5 217 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 SDHAF1A6NFY7 115 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 F2Z2F3 143 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 MPC2O95563 127 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 IGLC6P0CF74 106 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 PMCHP20382 165 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 ATP6V0CP27449 155 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 TEX261Q6UWH6 196 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 COX6B2Q6YFQ2 88 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 MRPL55Q7Z7F7 128 aaKnown RBP1.75□□□□□ -2.13
ATR-208ENST00000515149 BAGE2Q86Y30 109 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 FAM19A2Q8N3H0 131 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 GATD1Q8NB37 220 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 RPL39LQ96EH5 51 aaKnown RBP1.75□□□□□ -2.13
ATR-208ENST00000515149 PACRGQ96M98 296 aaPredicted RBP1.75□□□□□ -2.13
ATR-208ENST00000515149 FAM210AQ96ND0 272 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 TMEM242Q9NWH2 141 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 TNFSF18Q9UNG2 199 aa1.75□□□□□ -2.13
ATR-208ENST00000515149 MAP1LC3B2A6NCE7 125 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 INMT-MINDY4F8WBC2 141 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 PFDN1O60925 122 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 H2BFSP57053 126 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 DEFA1P59665 94 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 ZNF726P1Q15940 193 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 RNASE13Q5GAN3 156 aaKnown RBP1.74□□□□□ -2.13
ATR-208ENST00000515149 AKR1C8PQ5T2L2 129 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 Q5W150 140 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 UNQ6190/PRO20217Q6UXQ8 127 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 Q6ZUT4 128 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 SMIM15Q7Z3B0 74 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 NKAPP1Q8N9T2 125 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 MAP1LC3BQ9GZQ8 125 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 TP73-AS1Q9UF72 201 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 C22orf24Q9Y442 160 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 CSDC2Q9Y534 153 aaKnown RBP1.74□□□□□ -2.13
ATR-208ENST00000515149 USH2AO75445 5202 aa1.74□□□□□ -2.13
ATR-208ENST00000515149 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 TGIF2-C20orf24A0A0A6YYL0 155 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 TRBV6-5A0A0K0K1A5 114 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 FAM240BA0A1B0GVZ2 78 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 H0Y8G0 127 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 PLA2G10O15496 165 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 IFNA1P01562 189 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 FCER1GP30273 86 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 DEFB116Q30KQ4 102 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 UQCC3Q6UW78 93 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 LYZL1Q6UWQ5 148 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 C3orf22Q8N5N4 141 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 CNFNQ9BYD5 112 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 RNASE7Q9H1E1 156 aaKnown RBP1.73□□□□□ -2.13
ATR-208ENST00000515149 ST20Q9HBF5 79 aa1.73□□□□□ -2.13
ATR-208ENST00000515149 BORCS7-ASMTA0A0B4J1R7 106 aa1.72□□□□□ -2.13
ATR-208ENST00000515149 IGHV3OR16-9A0A0B4J2B5 98 aa1.72□□□□□ -2.13
ATR-208ENST00000515149 PCP4L1A6NKN8 68 aa1.72□□□□□ -2.13
ATR-208ENST00000515149 ZNF727A8MUV8 499 aa1.72□□□□□ -2.13
ATR-208ENST00000515149 SSNA1O43805 119 aa1.72□□□□□ -2.13
ATR-208ENST00000515149 SPINK1P00995 79 aa1.72□□□□□ -2.13
ATR-208ENST00000515149 RPL35P42766 123 aaKnown RBP1.72□□□□□ -2.13
ATR-208ENST00000515149 FOXA3P55318 350 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms