RNA–Protein interactions for RNA: ENST00000515149.2

ATR-208, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-208ENST00000515149 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
ATR-208ENST00000515149 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
ATR-208ENST00000515149 SENP3Q9H4L4 574 aaPredicted RBP20.86■□□□□ 0.93
ATR-208ENST00000515149 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
ATR-208ENST00000515149 FOXD1Q16676 465 aa19.47■□□□□ 0.71
ATR-208ENST00000515149 PLPPR3Q6T4P5 718 aa19.01■□□□□ 0.63
ATR-208ENST00000515149 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
ATR-208ENST00000515149 ADRA2BP18089 450 aa18.45■□□□□ 0.54
ATR-208ENST00000515149 PIAS4Q8N2W9 510 aaPredicted RBP18.23■□□□□ 0.51
ATR-208ENST00000515149 MSH5O43196 834 aa18■□□□□ 0.47
ATR-208ENST00000515149 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
ATR-208ENST00000515149 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
ATR-208ENST00000515149 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
ATR-208ENST00000515149 PPP4R3CPQ6ZMV5 832 aa16.74■□□□□ 0.27
ATR-208ENST00000515149 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
ATR-208ENST00000515149 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
ATR-208ENST00000515149 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
ATR-208ENST00000515149 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
ATR-208ENST00000515149 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
ATR-208ENST00000515149 KCNA4P22459 653 aa16■□□□□ 0.15
ATR-208ENST00000515149 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
ATR-208ENST00000515149 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
ATR-208ENST00000515149 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
ATR-208ENST00000515149 RNF39Q9H2S5 420 aa15.46■□□□□ 0.07
ATR-208ENST00000515149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.05
ATR-208ENST00000515149 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
ATR-208ENST00000515149 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
ATR-208ENST00000515149 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
ATR-208ENST00000515149 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
ATR-208ENST00000515149 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
ATR-208ENST00000515149 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
ATR-208ENST00000515149 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.05
ATR-208ENST00000515149 ZBTB22O15209 634 aa14.76□□□□□ -0.05
ATR-208ENST00000515149 MYCNP04198 464 aaPredicted RBP14.73□□□□□ -0.05
ATR-208ENST00000515149 CAPN15O75808 1086 aa14.71□□□□□ -0.05
ATR-208ENST00000515149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
ATR-208ENST00000515149 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
ATR-208ENST00000515149 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
ATR-208ENST00000515149 DSG3P32926 999 aa14.59□□□□□ -0.07
ATR-208ENST00000515149 APLP2Q06481 763 aa14.59□□□□□ -0.07
ATR-208ENST00000515149 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
ATR-208ENST00000515149 ZNF219Q9P2Y4 722 aaPredicted RBP14.51□□□□□ -0.09
ATR-208ENST00000515149 ATF5Q9Y2D1 282 aaPredicted RBP14.46□□□□□ -0.09
ATR-208ENST00000515149 ABCB7O75027 752 aa14.43□□□□□ -0.1
ATR-208ENST00000515149 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
ATR-208ENST00000515149 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
ATR-208ENST00000515149 POLA2Q14181 598 aa14.27□□□□□ -0.13
ATR-208ENST00000515149 ATXN8OSP0DMR3 200 aa14.26□□□□□ -0.13
ATR-208ENST00000515149 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
ATR-208ENST00000515149 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
ATR-208ENST00000515149 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
ATR-208ENST00000515149 OSCARQ8IYS5 282 aa13.81□□□□□ -0.2
ATR-208ENST00000515149 FBLN2P98095 1184 aa13.74□□□□□ -0.21
ATR-208ENST00000515149 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
ATR-208ENST00000515149 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
ATR-208ENST00000515149 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
ATR-208ENST00000515149 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
ATR-208ENST00000515149 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
ATR-208ENST00000515149 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
ATR-208ENST00000515149 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
ATR-208ENST00000515149 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
ATR-208ENST00000515149 POTEHQ6S545 545 aa13.42□□□□□ -0.26
ATR-208ENST00000515149 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
ATR-208ENST00000515149 PABPN1Q86U42 306 aaKnown RBP eCLIP13.3□□□□□ -0.28
ATR-208ENST00000515149 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
ATR-208ENST00000515149 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
ATR-208ENST00000515149 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
ATR-208ENST00000515149 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
ATR-208ENST00000515149 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.3
ATR-208ENST00000515149 PRR29P0C7W0 189 aa13.03□□□□□ -0.32
ATR-208ENST00000515149 PROM2Q8N271 834 aa13.03□□□□□ -0.32
ATR-208ENST00000515149 PRKAR2AP13861 404 aaKnown RBP13.02□□□□□ -0.33
ATR-208ENST00000515149 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
ATR-208ENST00000515149 FKBP8Q14318 412 aa12.95□□□□□ -0.34
ATR-208ENST00000515149 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
ATR-208ENST00000515149 HAX1O00165 279 aa12.85□□□□□ -0.35
ATR-208ENST00000515149 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
ATR-208ENST00000515149 EVX2Q03828 476 aa12.82□□□□□ -0.36
ATR-208ENST00000515149 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
ATR-208ENST00000515149 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
ATR-208ENST00000515149 SP7Q8TDD2 431 aaPredicted RBP12.73□□□□□ -0.37
ATR-208ENST00000515149 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
ATR-208ENST00000515149 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
ATR-208ENST00000515149 MIER1Q8N108 512 aa12.59□□□□□ -0.39
ATR-208ENST00000515149 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
ATR-208ENST00000515149 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
ATR-208ENST00000515149 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
ATR-208ENST00000515149 GABBR2O75899 941 aa12.49□□□□□ -0.41
ATR-208ENST00000515149 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
ATR-208ENST00000515149 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
ATR-208ENST00000515149 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
ATR-208ENST00000515149 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
ATR-208ENST00000515149 RASEFQ8IZ41 740 aa12.4□□□□□ -0.42
ATR-208ENST00000515149 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
ATR-208ENST00000515149 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
ATR-208ENST00000515149 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
ATR-208ENST00000515149 NUBP1P53384 320 aa12.36□□□□□ -0.43
ATR-208ENST00000515149 ZBTB47Q9UFB7 747 aaPredicted RBP12.35□□□□□ -0.43
ATR-208ENST00000515149 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
ATR-208ENST00000515149 CLCN6P51797 869 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms