RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ESRGQ1W209 222 aa10.14□□□□□ -0.79
VCAN-211ENST00000513984 LYRM7Q5U5X0 104 aa10.14□□□□□ -0.79
VCAN-211ENST00000513984 SOSTDC1Q6X4U4 206 aa10.14□□□□□ -0.79
VCAN-211ENST00000513984 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
VCAN-211ENST00000513984 IBA57-AS1B1ANH7 110 aa10.14□□□□□ -0.79
VCAN-211ENST00000513984 C6orf226Q5I0X4 101 aa10.14□□□□□ -0.79
VCAN-211ENST00000513984 ENHOQ6UWT2 76 aa10.14□□□□□ -0.79
VCAN-211ENST00000513984 LOC107984156A0A0G2JMH3 177 aa10.12□□□□□ -0.79
VCAN-211ENST00000513984 KIAA0087Q14695 138 aa10.12□□□□□ -0.79
VCAN-211ENST00000513984 ARL17AQ8IVW1 177 aa10.12□□□□□ -0.79
VCAN-211ENST00000513984 TRAV8-4A0A0B4J246 113 aa10.11□□□□□ -0.79
VCAN-211ENST00000513984 GAGE12HA6NDE8 117 aa10.11□□□□□ -0.79
VCAN-211ENST00000513984 CRPP02741 224 aa10.11□□□□□ -0.79
VCAN-211ENST00000513984 MALP21145 153 aa10.11□□□□□ -0.79
VCAN-211ENST00000513984 CXCL5P42830 114 aa10.11□□□□□ -0.79
VCAN-211ENST00000513984 MIR7-3HGQ8N6C7 128 aa10.11□□□□□ -0.79
VCAN-211ENST00000513984 C15orf53Q8NAA6 179 aa10.11□□□□□ -0.79
VCAN-211ENST00000513984 H3BMG7 143 aa10.1□□□□□ -0.79
VCAN-211ENST00000513984 LINC00158P58513 81 aa10.1□□□□□ -0.79
VCAN-211ENST00000513984 UBE2WQ96B02 151 aa10.1□□□□□ -0.79
VCAN-211ENST00000513984 KLK5Q9Y337 293 aaPredicted RBP10.1□□□□□ -0.79
VCAN-211ENST00000513984 TRBV20-1A0A075B6N2 111 aa10.09□□□□□ -0.79
VCAN-211ENST00000513984 TRBV30A0A0K0K1B3 111 aa10.09□□□□□ -0.79
VCAN-211ENST00000513984 H7C2G1 150 aa10.09□□□□□ -0.79
VCAN-211ENST00000513984 Q1RN00 199 aa10.09□□□□□ -0.79
VCAN-211ENST00000513984 LINC01556Q5JQF7 62 aa10.09□□□□□ -0.79
VCAN-211ENST00000513984 CFAP161Q6P656 301 aa10.09□□□□□ -0.79
VCAN-211ENST00000513984 C2orf82Q6UX34 121 aa10.09□□□□□ -0.79
VCAN-211ENST00000513984 CKS1BP61024 79 aa10.08□□□□□ -0.8
VCAN-211ENST00000513984 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
VCAN-211ENST00000513984 PSMB2P49721 201 aa10.07□□□□□ -0.8
VCAN-211ENST00000513984 F8W1H4 67 aa10.07□□□□□ -0.8
VCAN-211ENST00000513984 TCL1BO95988 128 aa10.07□□□□□ -0.8
VCAN-211ENST00000513984 TRIAP1O43715 76 aa10.06□□□□□ -0.8
VCAN-211ENST00000513984 SCGB1C2P0DMR2 95 aa10.06□□□□□ -0.8
VCAN-211ENST00000513984 PFN2P35080 140 aa10.06□□□□□ -0.8
VCAN-211ENST00000513984 PRO0461Q9UI25 63 aa10.06□□□□□ -0.8
VCAN-211ENST00000513984 DNAH9Q9NYC9 4486 aa10.05□□□□□ -0.8
VCAN-211ENST00000513984 CCL18P55774 89 aa10.05□□□□□ -0.8
VCAN-211ENST00000513984 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
VCAN-211ENST00000513984 COX17Q14061 63 aa10.05□□□□□ -0.8
VCAN-211ENST00000513984 KRTAP26-1Q6PEX3 210 aa10.05□□□□□ -0.8
VCAN-211ENST00000513984 DNAH10OSP0CZ25 163 aa10.04□□□□□ -0.8
VCAN-211ENST00000513984 B9D2Q9BPU9 175 aa10.04□□□□□ -0.8
VCAN-211ENST00000513984 SND1-IT1Q9HBX3 110 aa10.04□□□□□ -0.8
VCAN-211ENST00000513984 LINC00588Q9Y4M8 146 aa10.02□□□□□ -0.81
VCAN-211ENST00000513984 IGKV2-28A0A075B6P5 120 aa10.01□□□□□ -0.81
VCAN-211ENST00000513984 TRAV13-2A0A0B4J235 113 aa10.01□□□□□ -0.81
VCAN-211ENST00000513984 IGKV2D-28P01615 120 aa10.01□□□□□ -0.81
VCAN-211ENST00000513984 COX6CP09669 75 aa10.01□□□□□ -0.81
VCAN-211ENST00000513984 WFDC2Q14508 124 aa10.01□□□□□ -0.81
VCAN-211ENST00000513984 OCIAD2Q56VL3 154 aa10.01□□□□□ -0.81
VCAN-211ENST00000513984 C6orf223Q8N319 242 aa10□□□□□ -0.81
VCAN-211ENST00000513984 MTURNQ8N3F0 131 aa10□□□□□ -0.81
VCAN-211ENST00000513984 COL7A1Q02388 2944 aa10□□□□□ -0.81
VCAN-211ENST00000513984 ATXN8Q156A1 80 aa10□□□□□ -0.81
VCAN-211ENST00000513984 LINC00337Q8N6G1 96 aa10□□□□□ -0.81
VCAN-211ENST00000513984 UNQ6190/PRO20217Q6UXQ8 127 aa9.99□□□□□ -0.81
VCAN-211ENST00000513984 MUC7Q8TAX7 377 aa9.99□□□□□ -0.81
VCAN-211ENST00000513984 NTN5Q8WTR8 489 aaPredicted RBP9.99□□□□□ -0.81
VCAN-211ENST00000513984 C1orf43Q9BWL3 253 aa9.99□□□□□ -0.81
VCAN-211ENST00000513984 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
VCAN-211ENST00000513984 SMCPP49901 116 aaPredicted RBP9.98□□□□□ -0.81
VCAN-211ENST00000513984 C9orf116Q5BN46 136 aaPredicted RBP9.98□□□□□ -0.81
VCAN-211ENST00000513984 C10orf25Q5T742 122 aa9.98□□□□□ -0.81
VCAN-211ENST00000513984 LINC00526Q96FQ7 95 aa9.98□□□□□ -0.81
VCAN-211ENST00000513984 UPK3BQ9BT76 320 aa9.98□□□□□ -0.81
VCAN-211ENST00000513984 STAB2Q8WWQ8 2551 aa9.96□□□□□ -0.81
VCAN-211ENST00000513984 C15orf56Q8N910 161 aa9.96□□□□□ -0.81
VCAN-211ENST00000513984 K7ERU9 68 aa9.96□□□□□ -0.82
VCAN-211ENST00000513984 IGKV2D-24A0A075B6R9 120 aa9.95□□□□□ -0.82
VCAN-211ENST00000513984 LST1O00453 97 aa9.95□□□□□ -0.82
VCAN-211ENST00000513984 NDUFC2O95298 119 aa9.95□□□□□ -0.82
VCAN-211ENST00000513984 ETDBQ3ZM63 59 aa9.95□□□□□ -0.82
VCAN-211ENST00000513984 LINC01620Q4KN68 170 aa9.95□□□□□ -0.82
VCAN-211ENST00000513984 ZNF561-AS1K7EIQ3 104 aa9.94□□□□□ -0.82
VCAN-211ENST00000513984 M0QXV9 152 aa9.94□□□□□ -0.82
VCAN-211ENST00000513984 RPL28P46779 137 aaKnown RBP9.94□□□□□ -0.82
VCAN-211ENST00000513984 CLEC2BQ92478 149 aa9.94□□□□□ -0.82
VCAN-211ENST00000513984 C6orf48Q9UBA6 75 aa9.94□□□□□ -0.82
VCAN-211ENST00000513984 C9JAW5 83 aa9.93□□□□□ -0.82
VCAN-211ENST00000513984 HIGD2BQ4VC39 106 aa9.93□□□□□ -0.82
VCAN-211ENST00000513984 SLC25A20O43772 301 aa9.93□□□□□ -0.82
VCAN-211ENST00000513984 NHLRC4P0CG21 123 aaPredicted RBP9.93□□□□□ -0.82
VCAN-211ENST00000513984 C2orf48Q96LS8 159 aa9.93□□□□□ -0.82
VCAN-211ENST00000513984 LINC01600Q96MT4 127 aa9.92□□□□□ -0.82
VCAN-211ENST00000513984 Q9HAA7 133 aa9.92□□□□□ -0.82
VCAN-211ENST00000513984 F8WDY8 70 aa9.91□□□□□ -0.82
VCAN-211ENST00000513984 CAMK2N2Q96S95 79 aa9.91□□□□□ -0.82
VCAN-211ENST00000513984 SMIM11BQ8TCY0 68 aa9.91□□□□□ -0.82
VCAN-211ENST00000513984 DNAH1Q9P2D7 4330 aa9.9□□□□□ -0.82
VCAN-211ENST00000513984 TRBV10-2A0A0K0K1G8 114 aa9.9□□□□□ -0.82
VCAN-211ENST00000513984 DYNC2H1Q8NCM8 4307 aaKnown RBP9.9□□□□□ -0.83
VCAN-211ENST00000513984 TEN1Q86WV5 123 aa9.89□□□□□ -0.83
VCAN-211ENST00000513984 APLNQ9ULZ1 77 aa9.89□□□□□ -0.83
VCAN-211ENST00000513984 Q6ZRU5 148 aa9.89□□□□□ -0.83
VCAN-211ENST00000513984 ANKRD29Q8N6D5 301 aa9.89□□□□□ -0.83
VCAN-211ENST00000513984 Q8NDZ9 215 aa9.88□□□□□ -0.83
VCAN-211ENST00000513984 OR13C6PQ8NH95 151 aa9.88□□□□□ -0.83
VCAN-211ENST00000513984 RMI2Q96E14 147 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms