RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 WFDC11Q8NEX6 87 aa6.85□□□□□ -1.31
VCAN-210ENST00000513960 A0A096LPF7 62 aa6.85□□□□□ -1.31
VCAN-210ENST00000513960 FAM222AQ5U5X8 452 aa6.85□□□□□ -1.31
VCAN-210ENST00000513960 CCL24O00175 119 aa6.85□□□□□ -1.31
VCAN-210ENST00000513960 RPL28P46779 137 aaKnown RBP6.85□□□□□ -1.31
VCAN-210ENST00000513960 FAM19A1Q7Z5A9 133 aa6.85□□□□□ -1.31
VCAN-210ENST00000513960 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
VCAN-210ENST00000513960 CUBNO60494 3623 aa6.85□□□□□ -1.31
VCAN-210ENST00000513960 TRAV25A0A0B4J276 109 aa6.84□□□□□ -1.31
VCAN-210ENST00000513960 UBL5Q9BZL1 73 aa6.84□□□□□ -1.31
VCAN-210ENST00000513960 PRR3P79522 188 aaKnown RBP6.84□□□□□ -1.31
VCAN-210ENST00000513960 Q6JHZ5 121 aa6.84□□□□□ -1.31
VCAN-210ENST00000513960 ODF3L2Q3SX64 289 aa6.84□□□□□ -1.31
VCAN-210ENST00000513960 C11orf72Q8NBR9 251 aa6.84□□□□□ -1.31
VCAN-210ENST00000513960 C2orf48Q96LS8 159 aa6.84□□□□□ -1.31
VCAN-210ENST00000513960 CDC42SE2Q9NRR3 84 aa6.84□□□□□ -1.31
VCAN-210ENST00000513960 UBR5O95071 2799 aaPredicted RBP6.84□□□□□ -1.31
VCAN-210ENST00000513960 RBM3P98179 157 aaKnown RBP6.84□□□□□ -1.32
VCAN-210ENST00000513960 PF4P02776 101 aa6.83□□□□□ -1.32
VCAN-210ENST00000513960 KRTAP1-3Q8IUG1 177 aa6.83□□□□□ -1.32
VCAN-210ENST00000513960 NTM-AS1Q6ZSK4 140 aa6.83□□□□□ -1.32
VCAN-210ENST00000513960 IGLV5-45A0A087WSX0 123 aa6.83□□□□□ -1.32
VCAN-210ENST00000513960 DEFB130BP0DP73 79 aa6.83□□□□□ -1.32
VCAN-210ENST00000513960 DEFB130AP0DP74 79 aa6.83□□□□□ -1.32
VCAN-210ENST00000513960 BEAN1Q3B7T3 259 aa6.83□□□□□ -1.32
VCAN-210ENST00000513960 IGKV2-28A0A075B6P5 120 aa6.82□□□□□ -1.32
VCAN-210ENST00000513960 IGKV2D-28P01615 120 aa6.82□□□□□ -1.32
VCAN-210ENST00000513960 LINC01561Q8N1V8 128 aa6.82□□□□□ -1.32
VCAN-210ENST00000513960 UPK3BQ9BT76 320 aa6.82□□□□□ -1.32
VCAN-210ENST00000513960 SNURFQ9Y675 71 aa6.82□□□□□ -1.32
VCAN-210ENST00000513960 V9GYY9 64 aa6.81□□□□□ -1.32
VCAN-210ENST00000513960 C1orf158Q8N1D5 194 aa6.81□□□□□ -1.32
VCAN-210ENST00000513960 ITPR3Q14573 2671 aa6.8□□□□□ -1.32
VCAN-210ENST00000513960 IGLV10-54A0A075B6I4 117 aa6.8□□□□□ -1.32
VCAN-210ENST00000513960 ESM1Q9NQ30 184 aa6.8□□□□□ -1.32
VCAN-210ENST00000513960 C22orf24Q9Y442 160 aa6.8□□□□□ -1.32
VCAN-210ENST00000513960 IGLV4-60A0A075B6I1 120 aa6.8□□□□□ -1.32
VCAN-210ENST00000513960 PRB2P02812 416 aaPredicted RBP6.8□□□□□ -1.32
VCAN-210ENST00000513960 FHL2Q14192 279 aa6.8□□□□□ -1.32
VCAN-210ENST00000513960 SCXQ7RTU7 201 aa6.8□□□□□ -1.32
VCAN-210ENST00000513960 CHD6Q8TD26 2715 aa6.8□□□□□ -1.32
VCAN-210ENST00000513960 FAM236DA0A1B0GTK5 79 aa6.8□□□□□ -1.32
VCAN-210ENST00000513960 FAM236CP0DP71 79 aa6.8□□□□□ -1.32
VCAN-210ENST00000513960 CMC4P56277 68 aaPredicted RBP6.8□□□□□ -1.32
VCAN-210ENST00000513960 PLA2G2AP14555 144 aa6.79□□□□□ -1.32
VCAN-210ENST00000513960 APCP25054 2843 aa6.79□□□□□ -1.32
VCAN-210ENST00000513960 FLNAP21333 2647 aaKnown RBP6.79□□□□□ -1.32
VCAN-210ENST00000513960 LINC01006Q8NI28 216 aa6.78□□□□□ -1.32
VCAN-210ENST00000513960 WFDC10AQ9H1F0 79 aa6.78□□□□□ -1.32
VCAN-210ENST00000513960 TRBV10-1A0A0K0K1A3 114 aa6.77□□□□□ -1.32
VCAN-210ENST00000513960 CCKP06307 115 aa6.77□□□□□ -1.32
VCAN-210ENST00000513960 ACANP16112 2415 aa6.77□□□□□ -1.33
VCAN-210ENST00000513960 JMJD7-PLA2G4BH0Y9G9 81 aa6.77□□□□□ -1.33
VCAN-210ENST00000513960 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
VCAN-210ENST00000513960 MTORP42345 2549 aa6.77□□□□□ -1.33
VCAN-210ENST00000513960 IBA57-AS1B1ANH7 110 aa6.76□□□□□ -1.33
VCAN-210ENST00000513960 OXTP01178 125 aa6.76□□□□□ -1.33
VCAN-210ENST00000513960 SS18Q15532 418 aa6.76□□□□□ -1.33
VCAN-210ENST00000513960 C6orf99Q4VX62 202 aa6.76□□□□□ -1.33
VCAN-210ENST00000513960 TRBV6-4A0A1B0GX49 114 aa6.75□□□□□ -1.33
VCAN-210ENST00000513960 TMEM256-PLSCR3K7ERE1 68 aa6.75□□□□□ -1.33
VCAN-210ENST00000513960 C9orf116Q5BN46 136 aaPredicted RBP6.75□□□□□ -1.33
VCAN-210ENST00000513960 IL17DQ8TAD2 202 aa6.75□□□□□ -1.33
VCAN-210ENST00000513960 C16orf74Q96GX8 76 aa6.75□□□□□ -1.33
VCAN-210ENST00000513960 NF1P21359 2839 aa6.74□□□□□ -1.33
VCAN-210ENST00000513960 RMI2Q96E14 147 aa6.74□□□□□ -1.33
VCAN-210ENST00000513960 C16orf95Q9H693 158 aa6.74□□□□□ -1.33
VCAN-210ENST00000513960 NDUFC2O95298 119 aa6.74□□□□□ -1.33
VCAN-210ENST00000513960 IGLV1-51P01701 117 aa6.73□□□□□ -1.33
VCAN-210ENST00000513960 Q8N814 137 aa6.73□□□□□ -1.33
VCAN-210ENST00000513960 LINC00269Q8N2A0 174 aa6.73□□□□□ -1.33
VCAN-210ENST00000513960 MPLKIPQ8TAP9 179 aa6.73□□□□□ -1.33
VCAN-210ENST00000513960 TRBV6-8A0A0A6YYG3 113 aa6.72□□□□□ -1.33
VCAN-210ENST00000513960 GYPEP15421 78 aa6.72□□□□□ -1.33
VCAN-210ENST00000513960 F8WEM9 126 aa6.72□□□□□ -1.33
VCAN-210ENST00000513960 RETNQ9HD89 108 aa6.72□□□□□ -1.33
VCAN-210ENST00000513960 LINC00959A0A1B0GUT2 108 aa6.72□□□□□ -1.33
VCAN-210ENST00000513960 DAD1P61803 113 aa6.72□□□□□ -1.33
VCAN-210ENST00000513960 ANGP03950 147 aaKnown RBP6.71□□□□□ -1.33
VCAN-210ENST00000513960 HTN3P15516 51 aa6.71□□□□□ -1.33
VCAN-210ENST00000513960 KRTAP1-1Q07627 177 aa6.71□□□□□ -1.34
VCAN-210ENST00000513960 IGHV3OR16-9A0A0B4J2B5 98 aa6.71□□□□□ -1.34
VCAN-210ENST00000513960 GIG44P09565 113 aaPredicted RBP6.71□□□□□ -1.34
VCAN-210ENST00000513960 J3QKU1 62 aa6.7□□□□□ -1.34
VCAN-210ENST00000513960 HIVEP2P31629 2446 aa6.7□□□□□ -1.34
VCAN-210ENST00000513960 ATP5EP2Q5VTU8 51 aa6.7□□□□□ -1.34
VCAN-210ENST00000513960 A0A087WZ39 114 aa6.7□□□□□ -1.34
VCAN-210ENST00000513960 C1orf195Q5TG92 126 aa6.7□□□□□ -1.34
VCAN-210ENST00000513960 Q6ZQY7 126 aa6.69□□□□□ -1.34
VCAN-210ENST00000513960 TRAV10A0A0B4J240 114 aa6.69□□□□□ -1.34
VCAN-210ENST00000513960 ZNF469Q96JG9 3925 aaPredicted RBP6.69□□□□□ -1.34
VCAN-210ENST00000513960 DEFB4AO15263 64 aa6.68□□□□□ -1.34
VCAN-210ENST00000513960 C19orf73Q9NVV2 129 aa6.68□□□□□ -1.34
VCAN-210ENST00000513960 PLAC8L1A1L4L8 177 aa6.68□□□□□ -1.34
VCAN-210ENST00000513960 Q5XG85 94 aa6.68□□□□□ -1.34
VCAN-210ENST00000513960 SEC61GP60059 68 aa6.67□□□□□ -1.34
VCAN-210ENST00000513960 FAM19A3Q7Z5A8 133 aa6.67□□□□□ -1.34
VCAN-210ENST00000513960 M0R2N4 97 aa6.67□□□□□ -1.34
VCAN-210ENST00000513960 LINC00336Q6ZUF6 198 aa6.67□□□□□ -1.34
VCAN-210ENST00000513960 CSNK1G2-AS1Q8NCQ2 148 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms