RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 LINC00587B1AMM8 73 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 PRM2P04554 102 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 IGLC3P0DOY3 106 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 NMUP48645 174 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 HERVK_113P63121 156 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 TMEM170BQ5T4T1 132 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 SFTA2Q6UW10 78 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 LINC00173Q6ZV60 143 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 NEGR1Q7Z3B1 354 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 Q8NAQ8 132 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 COPS9Q8WXC6 57 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 PLEKHB2Q96CS7 222 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 TINCRA0A1B0GVN0 87 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 A6NDN8 102 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 E9PLD3 99 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 TMEM262E9PQX1 116 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 P0DMU3 169 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 FAM231AP0DMU4 169 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 FAM231CP0DMU5 169 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 FGF6P10767 208 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 LGALS3P17931 250 aaKnown RBP3.06□□□□□ -1.92
CLDND1-228ENST00000513873 RPL39P62891 51 aaKnown RBP3.06□□□□□ -1.92
CLDND1-228ENST00000513873 COL5A1-AS1Q5SY13 56 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 TYMSOSQ8TAI1 123 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 C14orf144Q96I85 54 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 CHCHD7Q9BUK0 85 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 PRR34Q9NV39 138 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 UBE2D4Q9Y2X8 147 aa3.06□□□□□ -1.92
CLDND1-228ENST00000513873 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.05□□□□□ -1.92
CLDND1-228ENST00000513873 MYMXA0A1B0GTQ4 84 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 IGKV2-29A2NJV5 120 aaPredicted RBP3.05□□□□□ -1.92
CLDND1-228ENST00000513873 HTN3P15516 51 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 HSD52Q0P140 79 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 CIRBPQ14011 172 aaKnown RBP3.05□□□□□ -1.92
CLDND1-228ENST00000513873 SS18Q15532 418 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 TAL2Q16559 108 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 LELP1Q5T871 98 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 SCGB1D4Q6XE38 83 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 LINC00469Q8N7U9 141 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 C15orf53Q8NAA6 179 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 AMELXQ99217 191 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 CHAC1Q9BUX1 264 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 HIGD1BQ9P298 99 aa3.05□□□□□ -1.92
CLDND1-228ENST00000513873 TRAV10A0A0B4J240 114 aa3.04□□□□□ -1.92
CLDND1-228ENST00000513873 ZNF815PA8K554 130 aa3.04□□□□□ -1.92
CLDND1-228ENST00000513873 LEPROTO15243 131 aa3.04□□□□□ -1.92
CLDND1-228ENST00000513873 CTAG1AP78358 180 aa3.04□□□□□ -1.92
CLDND1-228ENST00000513873 Q6ZVH6 145 aa3.04□□□□□ -1.92
CLDND1-228ENST00000513873 CDC42SE2Q9NRR3 84 aa3.04□□□□□ -1.92
CLDND1-228ENST00000513873 DEFB131BA0A096LNP1 70 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 TRAV13-1A0A0B4J241 112 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 IGHV1-58A0A0C4DH39 117 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 A0A0J9YY99 117 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 TMEM223A0PJW6 202 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 TMEM238C9JI98 176 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 J3QQQ9 107 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 DEFB4AO15263 64 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 APOMO95445 188 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 LINC00694P0DN24 101 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 UBE2D1P51668 147 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 HERV-K104P63124 156 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 BATFQ16520 125 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 Q1RN00 199 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 C12orf74Q32Q52 190 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 MAJINQ3KP22 176 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 CD164L2Q6UWJ8 174 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 Q6ZUT4 128 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 FAM19A3Q7Z5A8 133 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 SBSPONQ8IVN8 264 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 LINC01561Q8N1V8 128 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 HIST1H4GQ99525 98 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 TM2D3Q9BRN9 247 aa3.03□□□□□ -1.92
CLDND1-228ENST00000513873 STARD9Q9P2P6 4700 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 TRAV8-4A0A0B4J246 113 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 A0A0J9YXV3 536 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 LOC100131303A0A0U1RQF7 123 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 K7EP13 123 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 CRPP02741 224 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 CCL18P55774 89 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 NTM-AS1Q6ZSK4 140 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 DEFB104AQ8WTQ1 72 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 ORAOV1Q8WV07 137 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 VSIG2Q96IQ7 327 aa3.02□□□□□ -1.93
CLDND1-228ENST00000513873 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.01□□□□□ -1.93
CLDND1-228ENST00000513873 A4D1N5 150 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 A8MU10 97 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 TIMM17BO60830 172 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 ANGP03950 147 aaKnown RBP3.01□□□□□ -1.93
CLDND1-228ENST00000513873 SMIM13P0DJ93 91 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 IFITM1P13164 125 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 ZNF22P17026 224 aaPredicted RBP3.01□□□□□ -1.93
CLDND1-228ENST00000513873 CXCL5P42830 114 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 HINT1P49773 126 aaPredicted RBP3.01□□□□□ -1.93
CLDND1-228ENST00000513873 TCTAP57738 103 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 RBX1P62877 108 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 LYRM7Q5U5X0 104 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 CEMP1Q6PRD7 247 aaPredicted RBP3.01□□□□□ -1.93
CLDND1-228ENST00000513873 LYPD5Q6UWN5 251 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms