RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 GAGE2DQ9UEU5 116 aa4.5□□□□□ -1.69
HTT-212ENST00000513639 TMEM218A2RU14 115 aa4.49□□□□□ -1.69
HTT-212ENST00000513639 S100PP25815 95 aa4.49□□□□□ -1.69
HTT-212ENST00000513639 COX19Q49B96 90 aa4.49□□□□□ -1.69
HTT-212ENST00000513639 PHF5AQ7RTV0 110 aaKnown RBP4.49□□□□□ -1.69
HTT-212ENST00000513639 FAM19A3Q7Z5A8 133 aa4.49□□□□□ -1.69
HTT-212ENST00000513639 TIMM17AQ99595 171 aa4.49□□□□□ -1.69
HTT-212ENST00000513639 GEMIN7Q9H840 131 aaKnown RBP4.49□□□□□ -1.69
HTT-212ENST00000513639 C6orf48Q9UBA6 75 aa4.49□□□□□ -1.69
HTT-212ENST00000513639 IGLV7-43P04211 117 aa4.48□□□□□ -1.69
HTT-212ENST00000513639 C2orf82Q6UX34 121 aa4.48□□□□□ -1.69
HTT-212ENST00000513639 ERASQ7Z444 233 aa4.48□□□□□ -1.69
HTT-212ENST00000513639 Q8IZM0 81 aa4.48□□□□□ -1.69
HTT-212ENST00000513639 TOMM6Q96B49 74 aa4.48□□□□□ -1.69
HTT-212ENST00000513639 SCGB3A1Q96QR1 104 aa4.48□□□□□ -1.69
HTT-212ENST00000513639 ALKBH7Q9BT30 221 aaPredicted RBP4.48□□□□□ -1.69
HTT-212ENST00000513639 GNB1LQ9BYB4 327 aa4.48□□□□□ -1.69
HTT-212ENST00000513639 LRP2P98164 4655 aa4.47□□□□□ -1.69
HTT-212ENST00000513639 RNF213Q63HN8 5207 aa4.47□□□□□ -1.69
HTT-212ENST00000513639 C9orf118A6NHY6 69 aa4.47□□□□□ -1.69
HTT-212ENST00000513639 LINC00310P59036 64 aa4.47□□□□□ -1.69
HTT-212ENST00000513639 UBE2BP63146 152 aa4.47□□□□□ -1.69
HTT-212ENST00000513639 LBHQ53QV2 105 aaPredicted RBP4.47□□□□□ -1.69
HTT-212ENST00000513639 FAM19A5Q7Z5A7 132 aaPredicted RBP4.47□□□□□ -1.69
HTT-212ENST00000513639 SEC11CQ9BY50 192 aa4.47□□□□□ -1.69
HTT-212ENST00000513639 TOMM7Q9P0U1 55 aa4.47□□□□□ -1.69
HTT-212ENST00000513639 FAM168BA1KXE4 195 aa4.46□□□□□ -1.7
HTT-212ENST00000513639 F8VRH5 84 aa4.46□□□□□ -1.7
HTT-212ENST00000513639 CXCL5P42830 114 aa4.46□□□□□ -1.7
HTT-212ENST00000513639 KIAA1644Q3SXP7 199 aa4.46□□□□□ -1.7
HTT-212ENST00000513639 ZC2HC1BQ5TFG8 222 aa4.46□□□□□ -1.7
HTT-212ENST00000513639 LINC00173Q6ZV60 143 aa4.46□□□□□ -1.7
HTT-212ENST00000513639 CDKN2A-AS1Q9UH64 79 aa4.46□□□□□ -1.7
HTT-212ENST00000513639 TINCRA0A1B0GVN0 87 aa4.45□□□□□ -1.7
HTT-212ENST00000513639 LINC01546A6NGU7 62 aa4.45□□□□□ -1.7
HTT-212ENST00000513639 H0Y9J4 135 aa4.45□□□□□ -1.7
HTT-212ENST00000513639 M0QXV9 152 aa4.45□□□□□ -1.7
HTT-212ENST00000513639 FABP9Q0Z7S8 132 aa4.45□□□□□ -1.7
HTT-212ENST00000513639 PDZD11Q5EBL8 140 aa4.45□□□□□ -1.7
HTT-212ENST00000513639 LINC00469Q8N7U9 141 aa4.45□□□□□ -1.7
HTT-212ENST00000513639 IGLV1-50A0A075B6I6 118 aa4.44□□□□□ -1.7
HTT-212ENST00000513639 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
HTT-212ENST00000513639 XP32Q5T750 250 aa4.44□□□□□ -1.7
HTT-212ENST00000513639 FA2HQ7L5A8 372 aa4.44□□□□□ -1.7
HTT-212ENST00000513639 CST9LQ9H4G1 147 aa4.44□□□□□ -1.7
HTT-212ENST00000513639 SMCO4Q9NRQ5 59 aa4.44□□□□□ -1.7
HTT-212ENST00000513639 C22orf24Q9Y442 160 aa4.44□□□□□ -1.7
HTT-212ENST00000513639 H3BRM9 83 aa4.43□□□□□ -1.7
HTT-212ENST00000513639 NUPR1O60356 82 aa4.43□□□□□ -1.7
HTT-212ENST00000513639 ZNF861PO60384 105 aa4.43□□□□□ -1.7
HTT-212ENST00000513639 ADCYAP1P18509 176 aa4.43□□□□□ -1.7
HTT-212ENST00000513639 RPL13AP40429 203 aaKnown RBP4.43□□□□□ -1.7
HTT-212ENST00000513639 PMVKQ15126 192 aa4.43□□□□□ -1.7
HTT-212ENST00000513639 RHEBQ15382 184 aa4.43□□□□□ -1.7
HTT-212ENST00000513639 KRTAP7-1Q8IUC3 87 aa4.43□□□□□ -1.7
HTT-212ENST00000513639 COX7B2Q8TF08 81 aa4.43□□□□□ -1.7
HTT-212ENST00000513639 TP73-AS1Q9UF72 201 aa4.43□□□□□ -1.7
HTT-212ENST00000513639 CARHSP1Q9Y2V2 147 aaKnown RBP4.43□□□□□ -1.7
HTT-212ENST00000513639 IGLV5-45A0A087WSX0 123 aa4.42□□□□□ -1.7
HTT-212ENST00000513639 IFITM2Q01629 132 aa4.42□□□□□ -1.7
HTT-212ENST00000513639 C10orf91Q5T1B1 145 aa4.42□□□□□ -1.7
HTT-212ENST00000513639 PRR26Q8N8Z3 221 aa4.42□□□□□ -1.7
HTT-212ENST00000513639 XAGE1AQ9HD64 81 aa4.42□□□□□ -1.7
HTT-212ENST00000513639 RPS10P5Q9NQ39 176 aa4.42□□□□□ -1.7
HTT-212ENST00000513639 SMIM1B2RUZ4 78 aa4.41□□□□□ -1.7
HTT-212ENST00000513639 ATP5LO75964 103 aa4.41□□□□□ -1.7
HTT-212ENST00000513639 LINC00614P0C842 121 aa4.41□□□□□ -1.7
HTT-212ENST00000513639 RPL28P46779 137 aaKnown RBP4.41□□□□□ -1.7
HTT-212ENST00000513639 RAB5BP61020 215 aa4.41□□□□□ -1.7
HTT-212ENST00000513639 MRPL55Q7Z7F7 128 aaKnown RBP4.41□□□□□ -1.7
HTT-212ENST00000513639 COMMD7Q86VX2 200 aa4.41□□□□□ -1.7
HTT-212ENST00000513639 KRTAP11-1Q8IUC1 163 aa4.41□□□□□ -1.7
HTT-212ENST00000513639 NDUFA6P56556 154 aa4.4□□□□□ -1.71
HTT-212ENST00000513639 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
HTT-212ENST00000513639 TRAPPC1Q9Y5R8 145 aa4.4□□□□□ -1.71
HTT-212ENST00000513639 BCE1O60756 84 aa4.39□□□□□ -1.71
HTT-212ENST00000513639 SPINK8P0C7L1 97 aa4.39□□□□□ -1.71
HTT-212ENST00000513639 COX17Q14061 63 aa4.39□□□□□ -1.71
HTT-212ENST00000513639 NDUFA5Q16718 116 aa4.39□□□□□ -1.71
HTT-212ENST00000513639 SFTA2Q6UW10 78 aa4.39□□□□□ -1.71
HTT-212ENST00000513639 NKAPP1Q8N9T2 125 aa4.39□□□□□ -1.71
HTT-212ENST00000513639 LINC00167Q96N53 147 aa4.39□□□□□ -1.71
HTT-212ENST00000513639 HBDP02042 147 aa4.38□□□□□ -1.71
HTT-212ENST00000513639 KRTAP1-4P0C5Y4 121 aa4.38□□□□□ -1.71
HTT-212ENST00000513639 IGLC3P0DOY3 106 aa4.38□□□□□ -1.71
HTT-212ENST00000513639 RPL24P83731 157 aaKnown RBP4.38□□□□□ -1.71
HTT-212ENST00000513639 IGLV5-37A0A075B6J1 123 aa4.37□□□□□ -1.71
HTT-212ENST00000513639 IGLV5-39A0A0G2JS06 123 aa4.37□□□□□ -1.71
HTT-212ENST00000513639 RPL37AP8A6NKH3 93 aa4.37□□□□□ -1.71
HTT-212ENST00000513639 B5MCH6 92 aa4.37□□□□□ -1.71
HTT-212ENST00000513639 SNAPINO95295 136 aa4.37□□□□□ -1.71
HTT-212ENST00000513639 APOC3P02656 99 aa4.37□□□□□ -1.71
HTT-212ENST00000513639 CRYGAP11844 174 aa4.37□□□□□ -1.71
HTT-212ENST00000513639 BAGE3Q86Y29 109 aa4.37□□□□□ -1.71
HTT-212ENST00000513639 SVBPQ8N300 66 aa4.37□□□□□ -1.71
HTT-212ENST00000513639 C18orf32Q8TCD1 76 aa4.37□□□□□ -1.71
HTT-212ENST00000513639 GAGE10A6NGK3 116 aa4.36□□□□□ -1.71
HTT-212ENST00000513639 PFN2P35080 140 aa4.36□□□□□ -1.71
HTT-212ENST00000513639 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
HTT-212ENST00000513639 UBE2AP49459 152 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms