RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 FAM19A5Q7Z5A7 132 aaPredicted RBP10.21□□□□□ -0.77
DDX41-213ENST00000512027 TRBV30A0A0K0K1B3 111 aa10.2□□□□□ -0.78
DDX41-213ENST00000512027 MT1HL1P0DM35 61 aa10.2□□□□□ -0.78
DDX41-213ENST00000512027 PMCHL1Q16048 86 aa10.2□□□□□ -0.78
DDX41-213ENST00000512027 LINC00469Q8N7U9 141 aa10.2□□□□□ -0.78
DDX41-213ENST00000512027 PACRGQ96M98 296 aaPredicted RBP10.2□□□□□ -0.78
DDX41-213ENST00000512027 SEC11AP67812 179 aa10.19□□□□□ -0.78
DDX41-213ENST00000512027 KRTAP7-1Q8IUC3 87 aa10.19□□□□□ -0.78
DDX41-213ENST00000512027 Q8IZM0 81 aa10.19□□□□□ -0.78
DDX41-213ENST00000512027 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
DDX41-213ENST00000512027 TNXBP22105 4242 aa10.18□□□□□ -0.78
DDX41-213ENST00000512027 SMIM1B2RUZ4 78 aa10.18□□□□□ -0.78
DDX41-213ENST00000512027 CKS1BP61024 79 aa10.18□□□□□ -0.78
DDX41-213ENST00000512027 C6orf226Q5I0X4 101 aa10.18□□□□□ -0.78
DDX41-213ENST00000512027 KRTAP11-1Q8IUC1 163 aa10.18□□□□□ -0.78
DDX41-213ENST00000512027 YPEL4Q96NS1 127 aa10.18□□□□□ -0.78
DDX41-213ENST00000512027 PSORS1C2Q9UIG4 136 aa10.18□□□□□ -0.78
DDX41-213ENST00000512027 TINCRA0A1B0GVN0 87 aa10.17□□□□□ -0.78
DDX41-213ENST00000512027 NDUFC2-KCTD14E9PQ53 114 aa10.17□□□□□ -0.78
DDX41-213ENST00000512027 PMVKQ15126 192 aa10.17□□□□□ -0.78
DDX41-213ENST00000512027 C9orf129Q5T035 196 aaKnown RBP10.17□□□□□ -0.78
DDX41-213ENST00000512027 LINC01549A6NIU2 74 aa10.16□□□□□ -0.78
DDX41-213ENST00000512027 SPINK8P0C7L1 97 aa10.16□□□□□ -0.78
DDX41-213ENST00000512027 IGLV5-45A0A087WSX0 123 aa10.15□□□□□ -0.78
DDX41-213ENST00000512027 LINC00614P0C842 121 aa10.15□□□□□ -0.78
DDX41-213ENST00000512027 CBLN2Q8IUK8 224 aa10.15□□□□□ -0.78
DDX41-213ENST00000512027 NDUFA6P56556 154 aa10.14□□□□□ -0.79
DDX41-213ENST00000512027 SRSF9Q13242 221 aaKnown RBP eCLIP10.14□□□□□ -0.79
DDX41-213ENST00000512027 C1orf137Q5JT78 98 aa10.14□□□□□ -0.79
DDX41-213ENST00000512027 F8VRH5 84 aa10.13□□□□□ -0.79
DDX41-213ENST00000512027 M0QXV9 152 aa10.13□□□□□ -0.79
DDX41-213ENST00000512027 HBDP02042 147 aa10.13□□□□□ -0.79
DDX41-213ENST00000512027 ODF1Q14990 250 aa10.13□□□□□ -0.79
DDX41-213ENST00000512027 SPINK6Q6UWN8 80 aa10.13□□□□□ -0.79
DDX41-213ENST00000512027 COX7B2Q8TF08 81 aa10.13□□□□□ -0.79
DDX41-213ENST00000512027 XAGE1AQ9HD64 81 aa10.13□□□□□ -0.79
DDX41-213ENST00000512027 PDZD11Q5EBL8 140 aa10.12□□□□□ -0.79
DDX41-213ENST00000512027 SLC7A5P1Q8MH63 180 aa10.12□□□□□ -0.79
DDX41-213ENST00000512027 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
DDX41-213ENST00000512027 IGLC3P0DOY3 106 aa10.1□□□□□ -0.79
DDX41-213ENST00000512027 LINC01600Q96MT4 127 aa10.1□□□□□ -0.79
DDX41-213ENST00000512027 ZNF22P17026 224 aaPredicted RBP10.09□□□□□ -0.79
DDX41-213ENST00000512027 CXCL5P42830 114 aa10.09□□□□□ -0.79
DDX41-213ENST00000512027 RAB5BP61020 215 aa10.08□□□□□ -0.8
DDX41-213ENST00000512027 UBE2BP63146 152 aa10.08□□□□□ -0.8
DDX41-213ENST00000512027 REG3GQ6UW15 175 aa10.07□□□□□ -0.8
DDX41-213ENST00000512027 C11orf86A6NJI1 115 aa10.06□□□□□ -0.8
DDX41-213ENST00000512027 H3BRM9 83 aa10.06□□□□□ -0.8
DDX41-213ENST00000512027 IGLV7-43P04211 117 aa10.06□□□□□ -0.8
DDX41-213ENST00000512027 BAGE3Q86Y29 109 aa10.06□□□□□ -0.8
DDX41-213ENST00000512027 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
DDX41-213ENST00000512027 ATP5LO75964 103 aa10.05□□□□□ -0.8
DDX41-213ENST00000512027 C22orf24Q9Y442 160 aa10.05□□□□□ -0.8
DDX41-213ENST00000512027 PLA2G2DQ9UNK4 145 aa10.04□□□□□ -0.8
DDX41-213ENST00000512027 TRGC2P03986 189 aa10.03□□□□□ -0.8
DDX41-213ENST00000512027 FAM19A2Q8N3H0 131 aa10.03□□□□□ -0.8
DDX41-213ENST00000512027 CHCHD1Q96BP2 118 aaKnown RBP10.03□□□□□ -0.8
DDX41-213ENST00000512027 KRTAP10-8P60410 259 aa10.02□□□□□ -0.81
DDX41-213ENST00000512027 TMEM170BQ5T4T1 132 aa10.02□□□□□ -0.81
DDX41-213ENST00000512027 CHTOPQ9Y3Y2 248 aaKnown RBP10.02□□□□□ -0.81
DDX41-213ENST00000512027 PFN2P35080 140 aa10.01□□□□□ -0.81
DDX41-213ENST00000512027 UBR4Q5T4S7 5183 aa10□□□□□ -0.81
DDX41-213ENST00000512027 IFI27L1Q96BM0 104 aa10□□□□□ -0.81
DDX41-213ENST00000512027 ZNF625Q96I27 306 aaPredicted RBP10□□□□□ -0.81
DDX41-213ENST00000512027 H0Y9J4 135 aa9.99□□□□□ -0.81
DDX41-213ENST00000512027 HSBP1O75506 76 aa9.99□□□□□ -0.81
DDX41-213ENST00000512027 LINC00310P59036 64 aa9.99□□□□□ -0.81
DDX41-213ENST00000512027 DIRC1Q969H9 104 aa9.99□□□□□ -0.81
DDX41-213ENST00000512027 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
DDX41-213ENST00000512027 MRPL55Q7Z7F7 128 aaKnown RBP9.98□□□□□ -0.81
DDX41-213ENST00000512027 RPL37AP8A6NKH3 93 aa9.97□□□□□ -0.81
DDX41-213ENST00000512027 SCO1O75880 301 aa9.97□□□□□ -0.81
DDX41-213ENST00000512027 ERG28Q9UKR5 140 aa9.97□□□□□ -0.81
DDX41-213ENST00000512027 TRAV12-1A0A0B4J245 112 aa9.96□□□□□ -0.82
DDX41-213ENST00000512027 COLCA2A8K830 154 aa9.96□□□□□ -0.82
DDX41-213ENST00000512027 H0Y8G0 127 aa9.96□□□□□ -0.82
DDX41-213ENST00000512027 SERF1AO75920 110 aa9.96□□□□□ -0.82
DDX41-213ENST00000512027 LBHQ53QV2 105 aaPredicted RBP9.96□□□□□ -0.82
DDX41-213ENST00000512027 LINC00167Q96N53 147 aa9.96□□□□□ -0.82
DDX41-213ENST00000512027 TP73-AS1Q9UF72 201 aa9.96□□□□□ -0.82
DDX41-213ENST00000512027 TMEM223A0PJW6 202 aa9.95□□□□□ -0.82
DDX41-213ENST00000512027 NUPR1O60356 82 aa9.95□□□□□ -0.82
DDX41-213ENST00000512027 PRR26Q8N8Z3 221 aa9.95□□□□□ -0.82
DDX41-213ENST00000512027 KRTAP1-4P0C5Y4 121 aa9.93□□□□□ -0.82
DDX41-213ENST00000512027 NKAPP1Q8N9T2 125 aa9.93□□□□□ -0.82
DDX41-213ENST00000512027 Q8NDZ9 215 aa9.93□□□□□ -0.82
DDX41-213ENST00000512027 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
DDX41-213ENST00000512027 IGLV5-37A0A075B6J1 123 aa9.92□□□□□ -0.82
DDX41-213ENST00000512027 A0A0U1RRA0 63 aa9.92□□□□□ -0.82
DDX41-213ENST00000512027 ZNF861PO60384 105 aa9.91□□□□□ -0.82
DDX41-213ENST00000512027 LEPROTL1O95214 131 aa9.91□□□□□ -0.82
DDX41-213ENST00000512027 IGKV2-28A0A075B6P5 120 aa9.9□□□□□ -0.82
DDX41-213ENST00000512027 IGKV2D-28P01615 120 aa9.9□□□□□ -0.82
DDX41-213ENST00000512027 VPREB1P12018 145 aa9.9□□□□□ -0.82
DDX41-213ENST00000512027 FABP4P15090 132 aa9.9□□□□□ -0.82
DDX41-213ENST00000512027 LRP2P98164 4655 aa9.89□□□□□ -0.83
DDX41-213ENST00000512027 BCE1O60756 84 aa9.89□□□□□ -0.83
DDX41-213ENST00000512027 LINC00158P58513 81 aa9.88□□□□□ -0.83
DDX41-213ENST00000512027 COX17Q14061 63 aa9.88□□□□□ -0.83
DDX41-213ENST00000512027 PMCHL2Q9BQD1 86 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms