RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TRBV30A0A0K0K1B3 111 aa8.2□□□□□ -1.1
RNF4-215ENST00000511843 SNAPINO95295 136 aa8.2□□□□□ -1.1
RNF4-215ENST00000511843 CKS1BP61024 79 aa8.2□□□□□ -1.1
RNF4-215ENST00000511843 SEC11AP67812 179 aa8.2□□□□□ -1.1
RNF4-215ENST00000511843 PMCHL1Q16048 86 aa8.2□□□□□ -1.1
RNF4-215ENST00000511843 NDUFA5Q16718 116 aa8.2□□□□□ -1.1
RNF4-215ENST00000511843 SVBPQ8N300 66 aa8.2□□□□□ -1.1
RNF4-215ENST00000511843 C18orf32Q8TCD1 76 aa8.2□□□□□ -1.1
RNF4-215ENST00000511843 PACRGQ96M98 296 aaPredicted RBP8.2□□□□□ -1.1
RNF4-215ENST00000511843 PSORS1C2Q9UIG4 136 aa8.2□□□□□ -1.1
RNF4-215ENST00000511843 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
RNF4-215ENST00000511843 NDUFC2-KCTD14E9PQ53 114 aa8.19□□□□□ -1.1
RNF4-215ENST00000511843 C6orf226Q5I0X4 101 aa8.19□□□□□ -1.1
RNF4-215ENST00000511843 C9orf129Q5T035 196 aaKnown RBP8.19□□□□□ -1.1
RNF4-215ENST00000511843 Q8IZM0 81 aa8.19□□□□□ -1.1
RNF4-215ENST00000511843 CST9LQ9H4G1 147 aa8.19□□□□□ -1.1
RNF4-215ENST00000511843 ODF1Q14990 250 aa8.18□□□□□ -1.1
RNF4-215ENST00000511843 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
RNF4-215ENST00000511843 TINCRA0A1B0GVN0 87 aa8.17□□□□□ -1.1
RNF4-215ENST00000511843 SPINK8P0C7L1 97 aa8.17□□□□□ -1.1
RNF4-215ENST00000511843 SRSF9Q13242 221 aaKnown RBP eCLIP8.17□□□□□ -1.1
RNF4-215ENST00000511843 PMVKQ15126 192 aa8.17□□□□□ -1.1
RNF4-215ENST00000511843 SPINK6Q6UWN8 80 aa8.17□□□□□ -1.1
RNF4-215ENST00000511843 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
RNF4-215ENST00000511843 M0QXV9 152 aa8.16□□□□□ -1.1
RNF4-215ENST00000511843 LINC00614P0C842 121 aa8.16□□□□□ -1.1
RNF4-215ENST00000511843 NDUFA6P56556 154 aa8.16□□□□□ -1.1
RNF4-215ENST00000511843 C1orf137Q5JT78 98 aa8.16□□□□□ -1.1
RNF4-215ENST00000511843 YPEL4Q96NS1 127 aa8.16□□□□□ -1.1
RNF4-215ENST00000511843 XAGE1AQ9HD64 81 aa8.16□□□□□ -1.1
RNF4-215ENST00000511843 LINC01549A6NIU2 74 aa8.15□□□□□ -1.1
RNF4-215ENST00000511843 SERTAD4-AS1Q5TG53 156 aa8.15□□□□□ -1.1
RNF4-215ENST00000511843 COX7B2Q8TF08 81 aa8.15□□□□□ -1.1
RNF4-215ENST00000511843 LINC01600Q96MT4 127 aa8.15□□□□□ -1.1
RNF4-215ENST00000511843 F8VRH5 84 aa8.14□□□□□ -1.11
RNF4-215ENST00000511843 HBDP02042 147 aa8.14□□□□□ -1.11
RNF4-215ENST00000511843 PDZD11Q5EBL8 140 aa8.14□□□□□ -1.11
RNF4-215ENST00000511843 CBLN2Q8IUK8 224 aa8.14□□□□□ -1.11
RNF4-215ENST00000511843 UBE2BP63146 152 aa8.12□□□□□ -1.11
RNF4-215ENST00000511843 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
RNF4-215ENST00000511843 TNXBP22105 4242 aa8.12□□□□□ -1.11
RNF4-215ENST00000511843 IGLV7-43P04211 117 aa8.11□□□□□ -1.11
RNF4-215ENST00000511843 IGLC3P0DOY3 106 aa8.11□□□□□ -1.11
RNF4-215ENST00000511843 ZNF22P17026 224 aaPredicted RBP8.11□□□□□ -1.11
RNF4-215ENST00000511843 CXCL5P42830 114 aa8.11□□□□□ -1.11
RNF4-215ENST00000511843 REG3GQ6UW15 175 aa8.11□□□□□ -1.11
RNF4-215ENST00000511843 SLC7A5P1Q8MH63 180 aa8.11□□□□□ -1.11
RNF4-215ENST00000511843 RAB5BP61020 215 aa8.1□□□□□ -1.11
RNF4-215ENST00000511843 C11orf86A6NJI1 115 aa8.09□□□□□ -1.11
RNF4-215ENST00000511843 H3BRM9 83 aa8.09□□□□□ -1.11
RNF4-215ENST00000511843 BAGE3Q86Y29 109 aa8.09□□□□□ -1.11
RNF4-215ENST00000511843 C22orf24Q9Y442 160 aa8.09□□□□□ -1.11
RNF4-215ENST00000511843 ATP5LO75964 103 aa8.08□□□□□ -1.12
RNF4-215ENST00000511843 KRTAP10-8P60410 259 aa8.08□□□□□ -1.12
RNF4-215ENST00000511843 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
RNF4-215ENST00000511843 PFN2P35080 140 aa8.06□□□□□ -1.12
RNF4-215ENST00000511843 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
RNF4-215ENST00000511843 TRGC2P03986 189 aa8.05□□□□□ -1.12
RNF4-215ENST00000511843 FAM19A2Q8N3H0 131 aa8.05□□□□□ -1.12
RNF4-215ENST00000511843 DIRC1Q969H9 104 aa8.05□□□□□ -1.12
RNF4-215ENST00000511843 CHCHD1Q96BP2 118 aaKnown RBP8.05□□□□□ -1.12
RNF4-215ENST00000511843 ZNF625Q96I27 306 aaPredicted RBP8.05□□□□□ -1.12
RNF4-215ENST00000511843 CHTOPQ9Y3Y2 248 aaKnown RBP8.05□□□□□ -1.12
RNF4-215ENST00000511843 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
RNF4-215ENST00000511843 H0Y9J4 135 aa8.04□□□□□ -1.12
RNF4-215ENST00000511843 MRPL55Q7Z7F7 128 aaKnown RBP8.04□□□□□ -1.12
RNF4-215ENST00000511843 IFI27L1Q96BM0 104 aa8.04□□□□□ -1.12
RNF4-215ENST00000511843 RPL37AP8A6NKH3 93 aa8.03□□□□□ -1.12
RNF4-215ENST00000511843 SCO1O75880 301 aa8.03□□□□□ -1.12
RNF4-215ENST00000511843 PRR26Q8N8Z3 221 aa8.03□□□□□ -1.12
RNF4-215ENST00000511843 UBR4Q5T4S7 5183 aa8.02□□□□□ -1.12
RNF4-215ENST00000511843 LINC00310P59036 64 aa8.02□□□□□ -1.13
RNF4-215ENST00000511843 LBHQ53QV2 105 aaPredicted RBP8.02□□□□□ -1.13
RNF4-215ENST00000511843 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
RNF4-215ENST00000511843 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
RNF4-215ENST00000511843 H0Y8G0 127 aa8.01□□□□□ -1.13
RNF4-215ENST00000511843 HSBP1O75506 76 aa8.01□□□□□ -1.13
RNF4-215ENST00000511843 TP73-AS1Q9UF72 201 aa8.01□□□□□ -1.13
RNF4-215ENST00000511843 TRAV12-1A0A0B4J245 112 aa8□□□□□ -1.13
RNF4-215ENST00000511843 SERF1AO75920 110 aa8□□□□□ -1.13
RNF4-215ENST00000511843 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
RNF4-215ENST00000511843 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
RNF4-215ENST00000511843 TMEM223A0PJW6 202 aa7.99□□□□□ -1.13
RNF4-215ENST00000511843 COLCA2A8K830 154 aa7.99□□□□□ -1.13
RNF4-215ENST00000511843 NUPR1O60356 82 aa7.99□□□□□ -1.13
RNF4-215ENST00000511843 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
RNF4-215ENST00000511843 Q8NDZ9 215 aa7.99□□□□□ -1.13
RNF4-215ENST00000511843 IGLV5-37A0A075B6J1 123 aa7.98□□□□□ -1.13
RNF4-215ENST00000511843 A0A0U1RRA0 63 aa7.98□□□□□ -1.13
RNF4-215ENST00000511843 ZNF861PO60384 105 aa7.98□□□□□ -1.13
RNF4-215ENST00000511843 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
RNF4-215ENST00000511843 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
RNF4-215ENST00000511843 BCE1O60756 84 aa7.96□□□□□ -1.14
RNF4-215ENST00000511843 VPREB1P12018 145 aa7.96□□□□□ -1.14
RNF4-215ENST00000511843 FABP4P15090 132 aa7.96□□□□□ -1.14
RNF4-215ENST00000511843 LEPROTL1O95214 131 aa7.95□□□□□ -1.14
RNF4-215ENST00000511843 LINC00158P58513 81 aa7.95□□□□□ -1.14
RNF4-215ENST00000511843 COX17Q14061 63 aa7.95□□□□□ -1.14
RNF4-215ENST00000511843 PMCHL2Q9BQD1 86 aa7.94□□□□□ -1.14
RNF4-215ENST00000511843 IGLV1-50A0A075B6I6 118 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms