RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 CACNA1CQ13936 2221 aa0.57□□□□□ -2.32
SUB1-208ENST00000511175 MAGI2Q86UL8 1455 aa0.56□□□□□ -2.32
SUB1-208ENST00000511175 UBR1Q8IWV7 1749 aa0.56□□□□□ -2.32
SUB1-208ENST00000511175 XRN1Q8IZH2 1706 aaKnown RBP0.56□□□□□ -2.32
SUB1-208ENST00000511175 LINC00959A0A1B0GUT2 108 aa0.56□□□□□ -2.32
SUB1-208ENST00000511175 HMGN2P05204 90 aaKnown RBP0.56□□□□□ -2.32
SUB1-208ENST00000511175 SPINK6Q6UWN8 80 aa0.56□□□□□ -2.32
SUB1-208ENST00000511175 DEFB107AQ8IZN7 70 aa0.56□□□□□ -2.32
SUB1-208ENST00000511175 NOTCH1P46531 2555 aa0.56□□□□□ -2.32
SUB1-208ENST00000511175 SPTBN2O15020 2390 aa0.56□□□□□ -2.32
SUB1-208ENST00000511175 FRAS1Q86XX4 4008 aa0.56□□□□□ -2.32
SUB1-208ENST00000511175 TTC28Q96AY4 2481 aa0.56□□□□□ -2.32
SUB1-208ENST00000511175 SHPRHQ149N8 1683 aa0.56□□□□□ -2.32
SUB1-208ENST00000511175 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
SUB1-208ENST00000511175 ABCA12Q86UK0 2595 aa0.55□□□□□ -2.32
SUB1-208ENST00000511175 RGPD4Q7Z3J3 1758 aa0.55□□□□□ -2.32
SUB1-208ENST00000511175 D6R8Y8 96 aa0.55□□□□□ -2.32
SUB1-208ENST00000511175 GNGT1P63211 74 aa0.55□□□□□ -2.32
SUB1-208ENST00000511175 MUSTN1Q8IVN3 82 aa0.55□□□□□ -2.32
SUB1-208ENST00000511175 TP53AIP1Q9HCN2 124 aa0.55□□□□□ -2.32
SUB1-208ENST00000511175 CHD9Q3L8U1 2897 aa0.55□□□□□ -2.32
SUB1-208ENST00000511175 TARBP1Q13395 1621 aaKnown RBP0.55□□□□□ -2.32
SUB1-208ENST00000511175 KIF14Q15058 1648 aa0.55□□□□□ -2.32
SUB1-208ENST00000511175 PPLO60437 1756 aa0.55□□□□□ -2.32
SUB1-208ENST00000511175 CCDC141Q6ZP82 1450 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 F8P00451 2351 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 TRBV7-4A0A0J9YYF1 115 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 LEPROTL1O95214 131 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 ACYP1P07311 99 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 KRTAP2-3P0C7H8 128 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 SNRPFP62306 86 aaKnown RBP0.54□□□□□ -2.32
SUB1-208ENST00000511175 NMSQ5H8A3 153 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 C6orf201Q7Z4U5 140 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 DEFB123Q8N688 67 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 KRTAP2-4Q9BYR9 128 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 KRTAP2-1Q9BYU5 128 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 PRO0255Q9UI72 69 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 UBE2D4Q9Y2X8 147 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 KNDC1Q76NI1 1749 aa0.54□□□□□ -2.32
SUB1-208ENST00000511175 SAMD9Q5K651 1589 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 PAPPAQ13219 1627 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 MAP3K4Q9Y6R4 1608 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 CACNA1EQ15878 2313 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 RGPD3A6NKT7 1758 aaPredicted RBP0.53□□□□□ -2.32
SUB1-208ENST00000511175 KANTRA0A1W2PQU2 76 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 IQCF6A8MYZ5 107 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 WFDC2Q14508 124 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 LINC00643Q86TS7 51 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 Q8IZM0 81 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 USMG5Q96IX5 58 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 S100A13Q99584 98 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 PIEZO2Q9H5I5 2752 aa0.53□□□□□ -2.32
SUB1-208ENST00000511175 ERVK-7P63135 1459 aa0.53□□□□□ -2.33
SUB1-208ENST00000511175 SETBP1Q9Y6X0 1596 aa0.53□□□□□ -2.33
SUB1-208ENST00000511175 A0A0G2JMZ2 1700 aa0.52□□□□□ -2.33
SUB1-208ENST00000511175 PAPPA2Q9BXP8 1791 aa0.52□□□□□ -2.33
SUB1-208ENST00000511175 DNAJC13O75165 2243 aa0.52□□□□□ -2.33
SUB1-208ENST00000511175 A0A1B0GU69 56 aa0.52□□□□□ -2.33
SUB1-208ENST00000511175 PRH1P02810 166 aa0.52□□□□□ -2.33
SUB1-208ENST00000511175 SLIT1O75093 1534 aa0.52□□□□□ -2.33
SUB1-208ENST00000511175 DIP2BQ9P265 1576 aa0.52□□□□□ -2.33
SUB1-208ENST00000511175 TMEM131LA2VDJ0 1609 aa0.51□□□□□ -2.33
SUB1-208ENST00000511175 ZNF292O60281 2723 aa0.51□□□□□ -2.33
SUB1-208ENST00000511175 IGLC2P0DOY2 106 aa0.51□□□□□ -2.33
SUB1-208ENST00000511175 IGLC3P0DOY3 106 aa0.51□□□□□ -2.33
SUB1-208ENST00000511175 COX8AP10176 69 aa0.51□□□□□ -2.33
SUB1-208ENST00000511175 TPRP12270 2363 aaKnown RBP0.51□□□□□ -2.33
SUB1-208ENST00000511175 PLGLAQ15195 96 aa0.51□□□□□ -2.33
SUB1-208ENST00000511175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.51□□□□□ -2.33
SUB1-208ENST00000511175 CELSR2Q9HCU4 2923 aa0.51□□□□□ -2.33
SUB1-208ENST00000511175 BIVM-ERCC5R4GMW8 1640 aa0.51□□□□□ -2.33
SUB1-208ENST00000511175 C2CD3Q4AC94 2353 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 C5P01031 1676 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 ATP7BP35670 1465 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 FXYD6-FXYD2A0A087WZ82 144 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 MYMXA0A1B0GTQ4 84 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 CFDP00746 253 aaPredicted RBP0.5□□□□□ -2.33
SUB1-208ENST00000511175 SPINK1P00995 79 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 ADIRFQ15847 76 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 Q5BKY6 102 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 ST20Q9HBF5 79 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 PLCE1Q9P212 2302 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 CRYBG1Q9Y4K1 1723 aa0.5□□□□□ -2.33
SUB1-208ENST00000511175 ALKQ9UM73 1620 aa0.49□□□□□ -2.33
SUB1-208ENST00000511175 CSMD3Q7Z407 3707 aa0.49□□□□□ -2.33
SUB1-208ENST00000511175 LRRC9Q6ZRR7 1453 aa0.49□□□□□ -2.33
SUB1-208ENST00000511175 COX6B1P14854 86 aa0.49□□□□□ -2.33
SUB1-208ENST00000511175 CRIPTQ9P021 101 aa0.49□□□□□ -2.33
SUB1-208ENST00000511175 PTPRZ1P23471 2315 aaPredicted RBP0.49□□□□□ -2.33
SUB1-208ENST00000511175 USP24Q9UPU5 2620 aa0.49□□□□□ -2.33
SUB1-208ENST00000511175 KDM5DQ9BY66 1539 aa0.48□□□□□ -2.33
SUB1-208ENST00000511175 DCAF1Q9Y4B6 1507 aa0.48□□□□□ -2.33
SUB1-208ENST00000511175 MYH4Q9Y623 1939 aa0.48□□□□□ -2.33
SUB1-208ENST00000511175 DOPEY2Q9Y3R5 2298 aa0.48□□□□□ -2.33
SUB1-208ENST00000511175 A0A1B0GUT8 65 aa0.48□□□□□ -2.33
SUB1-208ENST00000511175 NDUFB1O75438 58 aa0.48□□□□□ -2.33
SUB1-208ENST00000511175 RPL38P63173 70 aaKnown RBP0.48□□□□□ -2.33
SUB1-208ENST00000511175 SMR3AQ99954 134 aa0.48□□□□□ -2.33
SUB1-208ENST00000511175 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
SUB1-208ENST00000511175 URB1O60287 2271 aaKnown RBP0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms