RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 SEC11AP67812 179 aa8.99□□□□□ -0.97
COL12A1-210ENST00000511023 NDUFA5Q16718 116 aa8.99□□□□□ -0.97
COL12A1-210ENST00000511023 GAGE2EQ4V326 116 aa8.99□□□□□ -0.97
COL12A1-210ENST00000511023 KRTAP7-1Q8IUC3 87 aa8.99□□□□□ -0.97
COL12A1-210ENST00000511023 GEMIN7Q9H840 131 aaKnown RBP8.99□□□□□ -0.97
COL12A1-210ENST00000511023 SMCO4Q9NRQ5 59 aa8.99□□□□□ -0.97
COL12A1-210ENST00000511023 GAGE2DQ9UEU5 116 aa8.99□□□□□ -0.97
COL12A1-210ENST00000511023 TINCRA0A1B0GVN0 87 aa8.98□□□□□ -0.97
COL12A1-210ENST00000511023 LINC01549A6NIU2 74 aa8.98□□□□□ -0.97
COL12A1-210ENST00000511023 Q8IZM0 81 aa8.98□□□□□ -0.97
COL12A1-210ENST00000511023 IGLV5-45A0A087WSX0 123 aa8.97□□□□□ -0.97
COL12A1-210ENST00000511023 SMIM1B2RUZ4 78 aa8.97□□□□□ -0.97
COL12A1-210ENST00000511023 NDUFC2-KCTD14E9PQ53 114 aa8.97□□□□□ -0.97
COL12A1-210ENST00000511023 PRSS2P07478 247 aa8.97□□□□□ -0.97
COL12A1-210ENST00000511023 SRSF9Q13242 221 aaKnown RBP eCLIP8.97□□□□□ -0.97
COL12A1-210ENST00000511023 C6orf226Q5I0X4 101 aa8.97□□□□□ -0.97
COL12A1-210ENST00000511023 KRTAP11-1Q8IUC1 163 aa8.97□□□□□ -0.97
COL12A1-210ENST00000511023 LINC00469Q8N7U9 141 aa8.97□□□□□ -0.97
COL12A1-210ENST00000511023 PACRGQ96M98 296 aaPredicted RBP8.97□□□□□ -0.97
COL12A1-210ENST00000511023 PSORS1C2Q9UIG4 136 aa8.97□□□□□ -0.97
COL12A1-210ENST00000511023 LINC00614P0C842 121 aa8.96□□□□□ -0.98
COL12A1-210ENST00000511023 PMVKQ15126 192 aa8.96□□□□□ -0.98
COL12A1-210ENST00000511023 C9orf129Q5T035 196 aaKnown RBP8.96□□□□□ -0.98
COL12A1-210ENST00000511023 CKS1BP61024 79 aa8.95□□□□□ -0.98
COL12A1-210ENST00000511023 PMCHL1Q16048 86 aa8.95□□□□□ -0.98
COL12A1-210ENST00000511023 FAM19A5Q7Z5A7 132 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-210ENST00000511023 SPINK6Q6UWN8 80 aa8.94□□□□□ -0.98
COL12A1-210ENST00000511023 SPINK8P0C7L1 97 aa8.93□□□□□ -0.98
COL12A1-210ENST00000511023 PDZD11Q5EBL8 140 aa8.93□□□□□ -0.98
COL12A1-210ENST00000511023 F8VRH5 84 aa8.92□□□□□ -0.98
COL12A1-210ENST00000511023 HBDP02042 147 aa8.92□□□□□ -0.98
COL12A1-210ENST00000511023 CBLN2Q8IUK8 224 aa8.92□□□□□ -0.98
COL12A1-210ENST00000511023 COX7B2Q8TF08 81 aa8.92□□□□□ -0.98
COL12A1-210ENST00000511023 LINC01600Q96MT4 127 aa8.92□□□□□ -0.98
COL12A1-210ENST00000511023 IGLC3P0DOY3 106 aa8.91□□□□□ -0.98
COL12A1-210ENST00000511023 C1orf137Q5JT78 98 aa8.91□□□□□ -0.98
COL12A1-210ENST00000511023 SLC7A5P1Q8MH63 180 aa8.91□□□□□ -0.98
COL12A1-210ENST00000511023 M0QXV9 152 aa8.9□□□□□ -0.98
COL12A1-210ENST00000511023 NDUFA6P56556 154 aa8.9□□□□□ -0.98
COL12A1-210ENST00000511023 SERTAD4-AS1Q5TG53 156 aa8.9□□□□□ -0.98
COL12A1-210ENST00000511023 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.98
COL12A1-210ENST00000511023 CXCL5P42830 114 aa8.89□□□□□ -0.99
COL12A1-210ENST00000511023 RAB5BP61020 215 aa8.89□□□□□ -0.99
COL12A1-210ENST00000511023 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
COL12A1-210ENST00000511023 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
COL12A1-210ENST00000511023 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-210ENST00000511023 IGLV5-39A0A0G2JS06 123 aa8.87□□□□□ -0.99
COL12A1-210ENST00000511023 H3BRM9 83 aa8.87□□□□□ -0.99
COL12A1-210ENST00000511023 ATP5LO75964 103 aa8.87□□□□□ -0.99
COL12A1-210ENST00000511023 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
COL12A1-210ENST00000511023 KRTAP10-8P60410 259 aa8.87□□□□□ -0.99
COL12A1-210ENST00000511023 ODF1Q14990 250 aa8.87□□□□□ -0.99
COL12A1-210ENST00000511023 REG3GQ6UW15 175 aa8.87□□□□□ -0.99
COL12A1-210ENST00000511023 C11orf86A6NJI1 115 aa8.86□□□□□ -0.99
COL12A1-210ENST00000511023 BAGE3Q86Y29 109 aa8.86□□□□□ -0.99
COL12A1-210ENST00000511023 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
COL12A1-210ENST00000511023 UBE2BP63146 152 aa8.85□□□□□ -0.99
COL12A1-210ENST00000511023 CHCHD1Q96BP2 118 aaKnown RBP8.85□□□□□ -0.99
COL12A1-210ENST00000511023 TRGC2P03986 189 aa8.83□□□□□ -1
COL12A1-210ENST00000511023 PLA2G2DQ9UNK4 145 aa8.83□□□□□ -1
COL12A1-210ENST00000511023 CHTOPQ9Y3Y2 248 aaKnown RBP8.82□□□□□ -1
COL12A1-210ENST00000511023 LINC00310P59036 64 aa8.81□□□□□ -1
COL12A1-210ENST00000511023 FAM19A2Q8N3H0 131 aa8.81□□□□□ -1
COL12A1-210ENST00000511023 IFI27L1Q96BM0 104 aa8.81□□□□□ -1
COL12A1-210ENST00000511023 TRAV12-1A0A0B4J245 112 aa8.8□□□□□ -1
COL12A1-210ENST00000511023 H0Y9J4 135 aa8.8□□□□□ -1
COL12A1-210ENST00000511023 TMEM170BQ5T4T1 132 aa8.8□□□□□ -1
COL12A1-210ENST00000511023 DIRC1Q969H9 104 aa8.8□□□□□ -1
COL12A1-210ENST00000511023 TP73-AS1Q9UF72 201 aa8.8□□□□□ -1
COL12A1-210ENST00000511023 UBR4Q5T4S7 5183 aa8.79□□□□□ -1
COL12A1-210ENST00000511023 COLCA2A8K830 154 aa8.79□□□□□ -1
COL12A1-210ENST00000511023 PFN2P35080 140 aa8.79□□□□□ -1
COL12A1-210ENST00000511023 LBHQ53QV2 105 aaPredicted RBP8.79□□□□□ -1
COL12A1-210ENST00000511023 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
COL12A1-210ENST00000511023 HSBP1O75506 76 aa8.78□□□□□ -1
COL12A1-210ENST00000511023 ZNF625Q96I27 306 aaPredicted RBP8.78□□□□□ -1
COL12A1-210ENST00000511023 LINC00167Q96N53 147 aa8.78□□□□□ -1
COL12A1-210ENST00000511023 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
COL12A1-210ENST00000511023 TMEM223A0PJW6 202 aa8.77□□□□□ -1.01
COL12A1-210ENST00000511023 SERF1AO75920 110 aa8.77□□□□□ -1.01
COL12A1-210ENST00000511023 ERG28Q9UKR5 140 aa8.77□□□□□ -1.01
COL12A1-210ENST00000511023 RPL37AP8A6NKH3 93 aa8.76□□□□□ -1.01
COL12A1-210ENST00000511023 NUPR1O60356 82 aa8.76□□□□□ -1.01
COL12A1-210ENST00000511023 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
COL12A1-210ENST00000511023 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
COL12A1-210ENST00000511023 SCO1O75880 301 aa8.75□□□□□ -1.01
COL12A1-210ENST00000511023 PRR26Q8N8Z3 221 aa8.75□□□□□ -1.01
COL12A1-210ENST00000511023 SND1-IT1Q9HBX3 110 aa8.75□□□□□ -1.01
COL12A1-210ENST00000511023 ZNF861PO60384 105 aa8.74□□□□□ -1.01
COL12A1-210ENST00000511023 Q8NDZ9 215 aa8.74□□□□□ -1.01
COL12A1-210ENST00000511023 LRP2P98164 4655 aa8.74□□□□□ -1.01
COL12A1-210ENST00000511023 BCE1O60756 84 aa8.73□□□□□ -1.01
COL12A1-210ENST00000511023 VPREB1P12018 145 aa8.73□□□□□ -1.01
COL12A1-210ENST00000511023 COX17Q14061 63 aa8.73□□□□□ -1.01
COL12A1-210ENST00000511023 H0Y8G0 127 aa8.72□□□□□ -1.01
COL12A1-210ENST00000511023 LEPROTL1O95214 131 aa8.72□□□□□ -1.01
COL12A1-210ENST00000511023 SFTA2Q6UW10 78 aa8.72□□□□□ -1.01
COL12A1-210ENST00000511023 NKAPP1Q8N9T2 125 aa8.72□□□□□ -1.01
COL12A1-210ENST00000511023 IGKV2-28A0A075B6P5 120 aa8.69□□□□□ -1.02
COL12A1-210ENST00000511023 A0A0U1RRA0 63 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms