RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 HRCT1Q6UXD1 115 aa8.93□□□□□ -0.98
LIN54-210ENST00000510877 IGKV2-24A0A0C4DH68 120 aa8.93□□□□□ -0.98
LIN54-210ENST00000510877 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
LIN54-210ENST00000510877 TRBV30A0A0K0K1B3 111 aa8.93□□□□□ -0.98
LIN54-210ENST00000510877 Q8N976 141 aa8.93□□□□□ -0.98
LIN54-210ENST00000510877 BAALCQ8WXS3 180 aa8.92□□□□□ -0.98
LIN54-210ENST00000510877 LINC00476Q8WZB0 136 aa8.92□□□□□ -0.98
LIN54-210ENST00000510877 CAMK2N2Q96S95 79 aa8.92□□□□□ -0.98
LIN54-210ENST00000510877 TP73-AS1Q9UF72 201 aa8.92□□□□□ -0.98
LIN54-210ENST00000510877 IGLV2-8P01709 118 aa8.92□□□□□ -0.98
LIN54-210ENST00000510877 PFN2P35080 140 aa8.92□□□□□ -0.98
LIN54-210ENST00000510877 GATA1P15976 413 aaPredicted RBP8.91□□□□□ -0.98
LIN54-210ENST00000510877 ZFAND2AQ8N6M9 145 aa8.91□□□□□ -0.98
LIN54-210ENST00000510877 Q8NAQ8 132 aa8.91□□□□□ -0.98
LIN54-210ENST00000510877 CLEC2BQ92478 149 aa8.91□□□□□ -0.98
LIN54-210ENST00000510877 X6R8D5 127 aa8.9□□□□□ -0.98
LIN54-210ENST00000510877 NBDYA0A0U1RRE5 68 aa8.9□□□□□ -0.98
LIN54-210ENST00000510877 LCE6AA0A183 80 aa8.9□□□□□ -0.98
LIN54-210ENST00000510877 LRCOL1A6NCL2 159 aa8.9□□□□□ -0.98
LIN54-210ENST00000510877 COX7A2LO14548 114 aa8.9□□□□□ -0.98
LIN54-210ENST00000510877 SUMO4Q6EEV6 95 aa8.9□□□□□ -0.98
LIN54-210ENST00000510877 MP68P56378 58 aa8.9□□□□□ -0.99
LIN54-210ENST00000510877 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
LIN54-210ENST00000510877 MRPS12O15235 138 aaKnown RBP8.89□□□□□ -0.99
LIN54-210ENST00000510877 PRO0628Q9UI54 55 aa8.89□□□□□ -0.99
LIN54-210ENST00000510877 KLLNB2CW77 178 aa8.88□□□□□ -0.99
LIN54-210ENST00000510877 USP17L23D6RBM5 183 aa8.88□□□□□ -0.99
LIN54-210ENST00000510877 DAND5Q8N907 189 aa8.88□□□□□ -0.99
LIN54-210ENST00000510877 LINC00310P59036 64 aa8.88□□□□□ -0.99
LIN54-210ENST00000510877 J3QL48 77 aa8.88□□□□□ -0.99
LIN54-210ENST00000510877 MXRA5Q9NR99 2828 aa8.88□□□□□ -0.99
LIN54-210ENST00000510877 TRAV23DV6A0A075B6W5 121 aa8.87□□□□□ -0.99
LIN54-210ENST00000510877 A0A0J9YXV3 536 aa8.87□□□□□ -0.99
LIN54-210ENST00000510877 NKAPP1Q8N9T2 125 aa8.87□□□□□ -0.99
LIN54-210ENST00000510877 MUC4Q99102 2169 aa8.87□□□□□ -0.99
LIN54-210ENST00000510877 TMEM256-PLSCR3K7ERE1 68 aa8.87□□□□□ -0.99
LIN54-210ENST00000510877 SEC61GP60059 68 aa8.87□□□□□ -0.99
LIN54-210ENST00000510877 LINC00269Q8N2A0 174 aa8.87□□□□□ -0.99
LIN54-210ENST00000510877 MPLKIPQ8TAP9 179 aa8.87□□□□□ -0.99
LIN54-210ENST00000510877 MLST8Q9BVC4 326 aa8.87□□□□□ -0.99
LIN54-210ENST00000510877 MIAQ16674 131 aa8.86□□□□□ -0.99
LIN54-210ENST00000510877 SND1-IT1Q9HBX3 110 aa8.86□□□□□ -0.99
LIN54-210ENST00000510877 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.86□□□□□ -0.99
LIN54-210ENST00000510877 IGKV2-29A2NJV5 120 aaPredicted RBP8.86□□□□□ -0.99
LIN54-210ENST00000510877 MED14OSP0DP75 135 aa8.86□□□□□ -0.99
LIN54-210ENST00000510877 FUSP35637 526 aaKnown RBP eCLIP8.86□□□□□ -0.99
LIN54-210ENST00000510877 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
LIN54-210ENST00000510877 UPK3BQ9BT76 320 aa8.86□□□□□ -0.99
LIN54-210ENST00000510877 IGKV2D-26A0A0A0MRZ7 120 aa8.86□□□□□ -0.99
LIN54-210ENST00000510877 TIMM17BO60830 172 aa8.86□□□□□ -0.99
LIN54-210ENST00000510877 SDIM1Q6ZPB5 146 aa8.86□□□□□ -0.99
LIN54-210ENST00000510877 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
LIN54-210ENST00000510877 TIRAPP58753 221 aa8.85□□□□□ -0.99
LIN54-210ENST00000510877 REG3AQ06141 175 aa8.85□□□□□ -0.99
LIN54-210ENST00000510877 PPDPFQ9H3Y8 114 aa8.85□□□□□ -0.99
LIN54-210ENST00000510877 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
LIN54-210ENST00000510877 C5orf38Q86SI9 138 aa8.84□□□□□ -0.99
LIN54-210ENST00000510877 IGHV1-58A0A0C4DH39 117 aa8.84□□□□□ -0.99
LIN54-210ENST00000510877 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
LIN54-210ENST00000510877 SPTSSBQ8NFR3 76 aa8.84□□□□□ -0.99
LIN54-210ENST00000510877 MAPKAPK5-AS1Q8N8E1 139 aa8.84□□□□□ -0.99
LIN54-210ENST00000510877 HIGD2BQ4VC39 106 aa8.83□□□□□ -1
LIN54-210ENST00000510877 RPL39LQ96EH5 51 aaKnown RBP8.83□□□□□ -1
LIN54-210ENST00000510877 NREPQ16612 68 aa8.82□□□□□ -1
LIN54-210ENST00000510877 A0A0J9YXY3 114 aa8.82□□□□□ -1
LIN54-210ENST00000510877 LYPD5Q6UWN5 251 aa8.82□□□□□ -1
LIN54-210ENST00000510877 C14orf132Q9NPU4 83 aa8.82□□□□□ -1
LIN54-210ENST00000510877 TRBV6-8A0A0A6YYG3 113 aa8.82□□□□□ -1
LIN54-210ENST00000510877 NEXN-AS1Q8NBZ9 246 aa8.82□□□□□ -1
LIN54-210ENST00000510877 TRIAP1O43715 76 aa8.82□□□□□ -1
LIN54-210ENST00000510877 LAMA5O15230 3695 aa8.81□□□□□ -1
LIN54-210ENST00000510877 ESRGQ1W209 222 aa8.81□□□□□ -1
LIN54-210ENST00000510877 Q6JHZ5 121 aa8.81□□□□□ -1
LIN54-210ENST00000510877 DMDP11532 3685 aa8.81□□□□□ -1
LIN54-210ENST00000510877 OTOGQ6ZRI0 2925 aa8.81□□□□□ -1
LIN54-210ENST00000510877 LST1O00453 97 aa8.81□□□□□ -1
LIN54-210ENST00000510877 ZNF80P51504 273 aaPredicted RBP8.8□□□□□ -1
LIN54-210ENST00000510877 FBN2P35556 2912 aa8.8□□□□□ -1
LIN54-210ENST00000510877 WFDC10BQ8IUB3 73 aa8.8□□□□□ -1
LIN54-210ENST00000510877 NDUFA1O15239 70 aa8.8□□□□□ -1
LIN54-210ENST00000510877 LINC00315P59091 139 aa8.8□□□□□ -1
LIN54-210ENST00000510877 FHL2Q14192 279 aa8.79□□□□□ -1
LIN54-210ENST00000510877 CHCHD7Q9BUK0 85 aa8.79□□□□□ -1
LIN54-210ENST00000510877 DCHS2Q6V1P9 2916 aa8.79□□□□□ -1
LIN54-210ENST00000510877 RNASE13Q5GAN3 156 aaKnown RBP8.79□□□□□ -1
LIN54-210ENST00000510877 CDIP1Q9H305 208 aa8.79□□□□□ -1
LIN54-210ENST00000510877 H3BNG1 76 aa8.78□□□□□ -1
LIN54-210ENST00000510877 SPAG11BQ08648 103 aa8.78□□□□□ -1
LIN54-210ENST00000510877 PRR9Q5T870 116 aa8.78□□□□□ -1
LIN54-210ENST00000510877 NF1P21359 2839 aa8.77□□□□□ -1
LIN54-210ENST00000510877 LINC00322Q6ZN03 302 aaPredicted RBP8.77□□□□□ -1
LIN54-210ENST00000510877 COX7B2Q8TF08 81 aa8.77□□□□□ -1
LIN54-210ENST00000510877 LINC00588Q9Y4M8 146 aa8.77□□□□□ -1
LIN54-210ENST00000510877 RELNP78509 3460 aa8.77□□□□□ -1.01
LIN54-210ENST00000510877 UBE2D3P61077 147 aa8.77□□□□□ -1.01
LIN54-210ENST00000510877 UBE2D2P62837 147 aa8.77□□□□□ -1.01
LIN54-210ENST00000510877 KLK9Q2XQG4 91 aa8.77□□□□□ -1.01
LIN54-210ENST00000510877 C20orf203Q8NBC4 194 aa8.77□□□□□ -1.01
LIN54-210ENST00000510877 LINC00467Q9BRT7 94 aa8.77□□□□□ -1.01
LIN54-210ENST00000510877 ASPMQ8IZT6 3477 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms