RNA–Protein interactions for RNA: ENST00000509805.5

SMN2-209, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-209ENST00000509805 C2orf88Q9BSF0 95 aa-0.39□□□□□ -2.47
SMN2-209ENST00000509805 FXYD6Q9H0Q3 95 aa-0.39□□□□□ -2.47
SMN2-209ENST00000509805 NUP188Q5SRE5 1749 aa-0.39□□□□□ -2.47
SMN2-209ENST00000509805 NLRP1Q9C000 1473 aa-0.4□□□□□ -2.47
SMN2-209ENST00000509805 CHD1O14646 1710 aa-0.4□□□□□ -2.47
SMN2-209ENST00000509805 XRN1Q8IZH2 1706 aaKnown RBP-0.4□□□□□ -2.47
SMN2-209ENST00000509805 NAP1L6A6NFF2 107 aa-0.4□□□□□ -2.47
SMN2-209ENST00000509805 LOC730098B7Z3J9 87 aa-0.4□□□□□ -2.47
SMN2-209ENST00000509805 COX6CP09669 75 aa-0.4□□□□□ -2.47
SMN2-209ENST00000509805 S100A1P23297 94 aa-0.4□□□□□ -2.47
SMN2-209ENST00000509805 PRO1854Q9UHT4 67 aa-0.4□□□□□ -2.47
SMN2-209ENST00000509805 GOLGA4Q13439 2230 aaKnown RBP-0.4□□□□□ -2.47
SMN2-209ENST00000509805 COL4A6Q14031 1691 aa-0.4□□□□□ -2.47
SMN2-209ENST00000509805 SETXQ7Z333 2677 aaKnown RBP-0.41□□□□□ -2.47
SMN2-209ENST00000509805 MAPKBP1O60336 1514 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 A0A1B0GWA3 101 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 TRAPPC2P0DI81 140 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 TRAPPC2BP0DI82 140 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 KRTAP19-8Q3LI54 63 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 DEFB105AQ8NG35 78 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 PRO1933Q9H354 126 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 EP300Q09472 2414 aaPredicted RBP-0.41□□□□□ -2.48
SMN2-209ENST00000509805 TOPAZ1Q8N9V7 1692 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 SETBP1Q9Y6X0 1596 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 FLGP20930 4061 aaPredicted RBP-0.41□□□□□ -2.48
SMN2-209ENST00000509805 NBPF19A0A087WUL8 3843 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 DCHS2Q6V1P9 2916 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 PLEKHH2Q8IVE3 1493 aa-0.41□□□□□ -2.48
SMN2-209ENST00000509805 CREBBPQ92793 2442 aa-0.42□□□□□ -2.48
SMN2-209ENST00000509805 PIEZO2Q9H5I5 2752 aa-0.42□□□□□ -2.48
SMN2-209ENST00000509805 H3BQ15 152 aa-0.42□□□□□ -2.48
SMN2-209ENST00000509805 SPINK4O60575 86 aa-0.42□□□□□ -2.48
SMN2-209ENST00000509805 SNCAP37840 140 aa-0.42□□□□□ -2.48
SMN2-209ENST00000509805 GNG8Q9UK08 70 aa-0.42□□□□□ -2.48
SMN2-209ENST00000509805 SETD2Q9BYW2 2564 aaPredicted RBP-0.42□□□□□ -2.48
SMN2-209ENST00000509805 A0A0G2JMZ2 1700 aa-0.42□□□□□ -2.48
SMN2-209ENST00000509805 FMN2Q9NZ56 1722 aa-0.42□□□□□ -2.48
SMN2-209ENST00000509805 MAP1BP46821 2468 aaKnown RBP-0.43□□□□□ -2.48
SMN2-209ENST00000509805 LAMA2P24043 3122 aaKnown RBP-0.43□□□□□ -2.48
SMN2-209ENST00000509805 WNK1Q9H4A3 2382 aa-0.43□□□□□ -2.48
SMN2-209ENST00000509805 hADV29S1A0JD25 119 aa-0.43□□□□□ -2.48
SMN2-209ENST00000509805 CRYM-AS1A6NIL9 109 aa-0.43□□□□□ -2.48
SMN2-209ENST00000509805 SAA2P0DJI9 122 aaPredicted RBP-0.43□□□□□ -2.48
SMN2-209ENST00000509805 C12orf57Q99622 126 aa-0.43□□□□□ -2.48
SMN2-209ENST00000509805 LINC00846Q9NV44 126 aa-0.43□□□□□ -2.48
SMN2-209ENST00000509805 MARF1Q9Y4F3 1742 aaKnown RBP-0.44□□□□□ -2.48
SMN2-209ENST00000509805 COL6A3P12111 3177 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 PAPPA2Q9BXP8 1791 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 ABCC5O15440 1437 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 NBEAL1Q6ZS30 2694 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 A0A087WVE0 104 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 SYS1-DBNDD2H3BUS1 97 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 M0R2T5 61 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 SARNPP82979 210 aaKnown RBP-0.44□□□□□ -2.48
SMN2-209ENST00000509805 TMEM203Q969S6 136 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 STAB2Q8WWQ8 2551 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 IQSEC2Q5JU85 1478 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 APC2O95996 2303 aa-0.44□□□□□ -2.48
SMN2-209ENST00000509805 ABCA13Q86UQ4 5058 aa-0.45□□□□□ -2.48
SMN2-209ENST00000509805 COX8AP10176 69 aa-0.45□□□□□ -2.48
SMN2-209ENST00000509805 SEC11AP67812 179 aa-0.45□□□□□ -2.48
SMN2-209ENST00000509805 HSD52Q0P140 79 aa-0.45□□□□□ -2.48
SMN2-209ENST00000509805 USMG5Q96IX5 58 aa-0.45□□□□□ -2.48
SMN2-209ENST00000509805 APLNQ9ULZ1 77 aa-0.45□□□□□ -2.48
SMN2-209ENST00000509805 PKHD1P08F94 4074 aa-0.45□□□□□ -2.48
SMN2-209ENST00000509805 ABCA3Q99758 1704 aa-0.45□□□□□ -2.48
SMN2-209ENST00000509805 SONP18583 2426 aaKnown RBP-0.45□□□□□ -2.48
SMN2-209ENST00000509805 TEP1Q99973 2627 aaKnown RBP-0.46□□□□□ -2.48
SMN2-209ENST00000509805 HECTD1Q9ULT8 2610 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 SPTA1P02549 2419 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 SLIT1O75093 1534 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 FAM135AQ9P2D6 1515 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 A0A1B0GU69 56 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 TMEM262E9PQX1 116 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 KRTDAPP60985 99 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 MRPS10P82664 201 aaKnown RBP-0.46□□□□□ -2.48
SMN2-209ENST00000509805 CRIPTQ9P021 101 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 ATRQ13535 2644 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 PDCD11Q14690 1871 aaKnown RBP-0.46□□□□□ -2.48
SMN2-209ENST00000509805 TGP01266 2768 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 DNHD1Q96M86 4753 aa-0.46□□□□□ -2.48
SMN2-209ENST00000509805 NKTRP30414 1462 aaKnown RBP-0.47□□□□□ -2.48
SMN2-209ENST00000509805 ZFYVE16Q7Z3T8 1539 aa-0.47□□□□□ -2.48
SMN2-209ENST00000509805 CPSF4LA6NMK7 179 aaKnown RBP-0.47□□□□□ -2.48
SMN2-209ENST00000509805 ASIPP42127 132 aa-0.47□□□□□ -2.48
SMN2-209ENST00000509805 GTF2H5Q6ZYL4 71 aa-0.47□□□□□ -2.48
SMN2-209ENST00000509805 CGREF1Q99674 301 aa-0.47□□□□□ -2.48
SMN2-209ENST00000509805 URB1O60287 2271 aaKnown RBP-0.47□□□□□ -2.48
SMN2-209ENST00000509805 KNDC1Q76NI1 1749 aa-0.47□□□□□ -2.49
SMN2-209ENST00000509805 SVEP1Q4LDE5 3571 aa-0.47□□□□□ -2.49
SMN2-209ENST00000509805 USP9YO00507 2555 aaPredicted RBP-0.48□□□□□ -2.49
SMN2-209ENST00000509805 DNAJC13O75165 2243 aa-0.48□□□□□ -2.49
SMN2-209ENST00000509805 TARBP1Q13395 1621 aaKnown RBP-0.48□□□□□ -2.49
SMN2-209ENST00000509805 A0A0G2JND7 137 aa-0.48□□□□□ -2.49
SMN2-209ENST00000509805 C7orf77A4D0Y5 90 aa-0.48□□□□□ -2.49
SMN2-209ENST00000509805 C6orf201Q7Z4U5 140 aa-0.48□□□□□ -2.49
SMN2-209ENST00000509805 CHD8Q9HCK8 2581 aa-0.48□□□□□ -2.49
SMN2-209ENST00000509805 ITPR3Q14573 2671 aa-0.48□□□□□ -2.49
SMN2-209ENST00000509805 MXRA5Q9NR99 2828 aa-0.48□□□□□ -2.49
SMN2-209ENST00000509805 EDC4Q6P2E9 1401 aaKnown RBP-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms