RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 K7EMI3 77 aa9.31□□□□□ -0.92
TPM3-219ENST00000509409 NPSP0C0P6 89 aa9.31□□□□□ -0.92
TPM3-219ENST00000509409 G0S2P27469 103 aa9.31□□□□□ -0.92
TPM3-219ENST00000509409 PAPPA-AS1Q5QFB9 102 aa9.31□□□□□ -0.92
TPM3-219ENST00000509409 SEC11AP67812 179 aa9.3□□□□□ -0.92
TPM3-219ENST00000509409 GEMIN7Q9H840 131 aaKnown RBP9.3□□□□□ -0.92
TPM3-219ENST00000509409 HERVK_113P63121 156 aa9.29□□□□□ -0.92
TPM3-219ENST00000509409 KIAA1644Q3SXP7 199 aa9.29□□□□□ -0.92
TPM3-219ENST00000509409 Q8IZM0 81 aa9.29□□□□□ -0.92
TPM3-219ENST00000509409 IGLV1-50A0A075B6I6 118 aa9.28□□□□□ -0.92
TPM3-219ENST00000509409 FAM19A3Q7Z5A8 133 aa9.28□□□□□ -0.92
TPM3-219ENST00000509409 CDKN2A-AS1Q9UH64 79 aa9.28□□□□□ -0.92
TPM3-219ENST00000509409 C22orf24Q9Y442 160 aa9.28□□□□□ -0.92
TPM3-219ENST00000509409 LBHQ53QV2 105 aaPredicted RBP9.27□□□□□ -0.93
TPM3-219ENST00000509409 TOMM6Q96B49 74 aa9.27□□□□□ -0.93
TPM3-219ENST00000509409 XAGE1AQ9HD64 81 aa9.27□□□□□ -0.93
TPM3-219ENST00000509409 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
TPM3-219ENST00000509409 TIMM17AQ99595 171 aa9.26□□□□□ -0.93
TPM3-219ENST00000509409 F8VRH5 84 aa9.25□□□□□ -0.93
TPM3-219ENST00000509409 NUPR1O60356 82 aa9.24□□□□□ -0.93
TPM3-219ENST00000509409 ZNF861PO60384 105 aa9.24□□□□□ -0.93
TPM3-219ENST00000509409 KRTAP1-4P0C5Y4 121 aa9.24□□□□□ -0.93
TPM3-219ENST00000509409 ERASQ7Z444 233 aa9.24□□□□□ -0.93
TPM3-219ENST00000509409 LPAP08519 4548 aa9.23□□□□□ -0.93
TPM3-219ENST00000509409 RPL13AP40429 203 aaKnown RBP9.23□□□□□ -0.93
TPM3-219ENST00000509409 CXCL5P42830 114 aa9.23□□□□□ -0.93
TPM3-219ENST00000509409 CARHSP1Q9Y2V2 147 aaKnown RBP9.22□□□□□ -0.93
TPM3-219ENST00000509409 TINCRA0A1B0GVN0 87 aa9.21□□□□□ -0.94
TPM3-219ENST00000509409 ADCYAP1P18509 176 aa9.21□□□□□ -0.94
TPM3-219ENST00000509409 PRR4Q16378 134 aa9.21□□□□□ -0.94
TPM3-219ENST00000509409 CLLU1Q5K131 121 aa9.21□□□□□ -0.94
TPM3-219ENST00000509409 MRPL55Q7Z7F7 128 aaKnown RBP9.21□□□□□ -0.94
TPM3-219ENST00000509409 COX7B2Q8TF08 81 aa9.21□□□□□ -0.94
TPM3-219ENST00000509409 TRAV9-1A0A075B6T8 112 aa9.2□□□□□ -0.94
TPM3-219ENST00000509409 S100PP25815 95 aa9.2□□□□□ -0.94
TPM3-219ENST00000509409 PDZD11Q5EBL8 140 aa9.2□□□□□ -0.94
TPM3-219ENST00000509409 TP73-AS1Q9UF72 201 aa9.2□□□□□ -0.94
TPM3-219ENST00000509409 TMEM218A2RU14 115 aa9.19□□□□□ -0.94
TPM3-219ENST00000509409 LINC01549A6NIU2 74 aa9.19□□□□□ -0.94
TPM3-219ENST00000509409 SMIM1B2RUZ4 78 aa9.19□□□□□ -0.94
TPM3-219ENST00000509409 RAB5BP61020 215 aa9.19□□□□□ -0.94
TPM3-219ENST00000509409 SPINK8P0C7L1 97 aa9.18□□□□□ -0.94
TPM3-219ENST00000509409 RPL28P46779 137 aaKnown RBP9.18□□□□□ -0.94
TPM3-219ENST00000509409 UQCC3Q6UW78 93 aa9.18□□□□□ -0.94
TPM3-219ENST00000509409 FA2HQ7L5A8 372 aa9.18□□□□□ -0.94
TPM3-219ENST00000509409 GNB1LQ9BYB4 327 aa9.18□□□□□ -0.94
TPM3-219ENST00000509409 CST9LQ9H4G1 147 aa9.18□□□□□ -0.94
TPM3-219ENST00000509409 GAGE10A6NGK3 116 aa9.17□□□□□ -0.94
TPM3-219ENST00000509409 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
TPM3-219ENST00000509409 BCE1O60756 84 aa9.17□□□□□ -0.94
TPM3-219ENST00000509409 LINC00167Q96N53 147 aa9.17□□□□□ -0.94
TPM3-219ENST00000509409 SMCO4Q9NRQ5 59 aa9.17□□□□□ -0.94
TPM3-219ENST00000509409 FABP9Q0Z7S8 132 aa9.16□□□□□ -0.94
TPM3-219ENST00000509409 PMVKQ15126 192 aa9.16□□□□□ -0.94
TPM3-219ENST00000509409 IGLV5-45A0A087WSX0 123 aa9.15□□□□□ -0.94
TPM3-219ENST00000509409 H3BRM9 83 aa9.15□□□□□ -0.94
TPM3-219ENST00000509409 TSPAN13O95857 204 aa9.15□□□□□ -0.94
TPM3-219ENST00000509409 MRPL18Q9H0U6 180 aaKnown RBP9.15□□□□□ -0.94
TPM3-219ENST00000509409 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
TPM3-219ENST00000509409 NDUFA6P56556 154 aa9.14□□□□□ -0.95
TPM3-219ENST00000509409 COX19Q49B96 90 aa9.14□□□□□ -0.95
TPM3-219ENST00000509409 NKAPP1Q8N9T2 125 aa9.14□□□□□ -0.95
TPM3-219ENST00000509409 ATP5LO75964 103 aa9.13□□□□□ -0.95
TPM3-219ENST00000509409 SEC11CQ9BY50 192 aa9.13□□□□□ -0.95
TPM3-219ENST00000509409 CRYGAP11844 174 aa9.12□□□□□ -0.95
TPM3-219ENST00000509409 UBE2AP49459 152 aa9.12□□□□□ -0.95
TPM3-219ENST00000509409 TYMSOSQ8TAI1 123 aa9.12□□□□□ -0.95
TPM3-219ENST00000509409 PFN2P35080 140 aa9.11□□□□□ -0.95
TPM3-219ENST00000509409 RPS10P5Q9NQ39 176 aa9.1□□□□□ -0.95
TPM3-219ENST00000509409 ANAPC11Q9NYG5 84 aa9.1□□□□□ -0.95
TPM3-219ENST00000509409 IGLV5-37A0A075B6J1 123 aa9.09□□□□□ -0.95
TPM3-219ENST00000509409 A0A087X002 238 aa9.09□□□□□ -0.95
TPM3-219ENST00000509409 IFITM2Q01629 132 aa9.09□□□□□ -0.95
TPM3-219ENST00000509409 IGKV2-28A0A075B6P5 120 aa9.08□□□□□ -0.96
TPM3-219ENST00000509409 SCO1O75880 301 aa9.08□□□□□ -0.96
TPM3-219ENST00000509409 IGKV2D-28P01615 120 aa9.08□□□□□ -0.96
TPM3-219ENST00000509409 COMMD7Q86VX2 200 aa9.08□□□□□ -0.96
TPM3-219ENST00000509409 IGLC3P0DOY3 106 aa9.07□□□□□ -0.96
TPM3-219ENST00000509409 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
TPM3-219ENST00000509409 LINC00614P0C842 121 aa9.06□□□□□ -0.96
TPM3-219ENST00000509409 TRAPPC1Q9Y5R8 145 aa9.06□□□□□ -0.96
TPM3-219ENST00000509409 IGLV5-39A0A0G2JS06 123 aa9.05□□□□□ -0.96
TPM3-219ENST00000509409 ZNF22P17026 224 aaPredicted RBP9.05□□□□□ -0.96
TPM3-219ENST00000509409 RHEBQ15382 184 aa9.05□□□□□ -0.96
TPM3-219ENST00000509409 ZNF625Q96I27 306 aaPredicted RBP9.05□□□□□ -0.96
TPM3-219ENST00000509409 RPL24P83731 157 aaKnown RBP9.04□□□□□ -0.96
TPM3-219ENST00000509409 FAM19A1Q7Z5A9 133 aa9.04□□□□□ -0.96
TPM3-219ENST00000509409 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
TPM3-219ENST00000509409 HBDP02042 147 aa9.03□□□□□ -0.96
TPM3-219ENST00000509409 PMCHL1Q16048 86 aa9.03□□□□□ -0.96
TPM3-219ENST00000509409 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
TPM3-219ENST00000509409 BAGE3Q86Y29 109 aa9.03□□□□□ -0.96
TPM3-219ENST00000509409 KRTAP13-1Q8IUC0 172 aa9.03□□□□□ -0.96
TPM3-219ENST00000509409 SND1-IT1Q9HBX3 110 aa9.03□□□□□ -0.96
TPM3-219ENST00000509409 A0A096LNJ9 63 aa9.02□□□□□ -0.97
TPM3-219ENST00000509409 VPREB1P12018 145 aa9.02□□□□□ -0.97
TPM3-219ENST00000509409 COX17Q14061 63 aa9.02□□□□□ -0.97
TPM3-219ENST00000509409 C10orf91Q5T1B1 145 aa9.02□□□□□ -0.97
TPM3-219ENST00000509409 C18orf32Q8TCD1 76 aa9.02□□□□□ -0.97
TPM3-219ENST00000509409 IGKV2D-26A0A0A0MRZ7 120 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms