RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 CHD1O14646 1710 aa-0.39□□□□□ -2.47
GYPB-210ENST00000508841 WNK3Q9BYP7 1800 aa-0.4□□□□□ -2.47
GYPB-210ENST00000508841 KNDC1Q76NI1 1749 aa-0.4□□□□□ -2.47
GYPB-210ENST00000508841 SDF2Q99470 211 aa-0.4□□□□□ -2.47
GYPB-210ENST00000508841 LRP6O75581 1613 aa-0.4□□□□□ -2.47
GYPB-210ENST00000508841 ZNF236Q9UL36 1845 aa-0.41□□□□□ -2.47
GYPB-210ENST00000508841 NKTRP30414 1462 aaKnown RBP-0.41□□□□□ -2.47
GYPB-210ENST00000508841 CFAP126Q5VTH2 177 aa-0.41□□□□□ -2.48
GYPB-210ENST00000508841 MT1LQ93083 61 aa-0.41□□□□□ -2.48
GYPB-210ENST00000508841 DPH3P1Q9H4G8 78 aa-0.41□□□□□ -2.48
GYPB-210ENST00000508841 BICRAQ9NZM4 1560 aa-0.41□□□□□ -2.48
GYPB-210ENST00000508841 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.41□□□□□ -2.48
GYPB-210ENST00000508841 RAPGEF6Q8TEU7 1601 aa-0.42□□□□□ -2.48
GYPB-210ENST00000508841 CUL7Q14999 1698 aa-0.42□□□□□ -2.48
GYPB-210ENST00000508841 M0R3E3 92 aa-0.42□□□□□ -2.48
GYPB-210ENST00000508841 SIX6O95475 246 aa-0.42□□□□□ -2.48
GYPB-210ENST00000508841 WFDC9Q8NEX5 89 aa-0.42□□□□□ -2.48
GYPB-210ENST00000508841 CASKIN1Q8WXD9 1431 aa-0.42□□□□□ -2.48
GYPB-210ENST00000508841 ADAMTS12P58397 1594 aa-0.42□□□□□ -2.48
GYPB-210ENST00000508841 C1orf167Q5SNV9 1468 aa-0.42□□□□□ -2.48
GYPB-210ENST00000508841 BCL9LQ86UU0 1499 aa-0.42□□□□□ -2.48
GYPB-210ENST00000508841 RIMS1Q86UR5 1692 aaKnown RBP-0.43□□□□□ -2.48
GYPB-210ENST00000508841 MYOM3Q5VTT5 1437 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 LOC105371267A0A1B0GV96 52 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 SPAARA0A1B0GVQ0 90 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 DEFB4AO15263 64 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 TNFP01375 233 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 WFDC2Q14508 124 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 KRTAP19-5Q3LI72 72 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 COPS9Q8WXC6 57 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 R4GMQ9 66 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 TSC2P49815 1807 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 ZNF831Q5JPB2 1677 aa-0.43□□□□□ -2.48
GYPB-210ENST00000508841 BCORQ6W2J9 1755 aa-0.44□□□□□ -2.48
GYPB-210ENST00000508841 K7EQZ3 153 aa-0.44□□□□□ -2.48
GYPB-210ENST00000508841 CCL18P55774 89 aa-0.44□□□□□ -2.48
GYPB-210ENST00000508841 RPS29P62273 56 aaKnown RBP-0.44□□□□□ -2.48
GYPB-210ENST00000508841 PLXNB2O15031 1838 aa-0.44□□□□□ -2.48
GYPB-210ENST00000508841 KDM3BQ7LBC6 1761 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 PTPN23Q9H3S7 1636 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 C10orf71Q711Q0 1435 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 MBD5Q9P267 1494 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 TTTY10Q9BZA0 68 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 PRO3102Q9H379 93 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 NPVFQ9HCQ7 196 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 SCN3BQ9NY72 215 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 SPCS1Q9Y6A9 102 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 CDC42BPAQ5VT25 1732 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 KIAA0586Q9BVV6 1533 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 ARHGEF12Q9NZN5 1544 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 CDC42BPGQ6DT37 1551 aa-0.45□□□□□ -2.48
GYPB-210ENST00000508841 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.45□□□□□ -2.48
GYPB-210ENST00000508841 ZC3H13Q5T200 1668 aaKnown RBP-0.46□□□□□ -2.48
GYPB-210ENST00000508841 PRDM2Q13029 1718 aa-0.46□□□□□ -2.48
GYPB-210ENST00000508841 DEFB1P60022 68 aa-0.46□□□□□ -2.48
GYPB-210ENST00000508841 GOLGA4Q13439 2230 aaKnown RBP-0.46□□□□□ -2.48
GYPB-210ENST00000508841 DOT1LQ8TEK3 1739 aa-0.47□□□□□ -2.48
GYPB-210ENST00000508841 MARF1Q9Y4F3 1742 aaKnown RBP-0.47□□□□□ -2.48
GYPB-210ENST00000508841 GRIN2AQ12879 1464 aa-0.47□□□□□ -2.48
GYPB-210ENST00000508841 ARHGAP35Q9NRY4 1499 aa-0.47□□□□□ -2.48
GYPB-210ENST00000508841 TRAV22A0A0B4J277 110 aa-0.47□□□□□ -2.48
GYPB-210ENST00000508841 S100A3P33764 101 aa-0.47□□□□□ -2.48
GYPB-210ENST00000508841 SMIM4Q8WVI0 70 aa-0.47□□□□□ -2.48
GYPB-210ENST00000508841 AQP10Q96PS8 301 aa-0.47□□□□□ -2.48
GYPB-210ENST00000508841 PLCH1Q4KWH8 1693 aa-0.47□□□□□ -2.48
GYPB-210ENST00000508841 PAPPA2Q9BXP8 1791 aa-0.47□□□□□ -2.49
GYPB-210ENST00000508841 TROQ12816 1431 aaPredicted RBP-0.47□□□□□ -2.49
GYPB-210ENST00000508841 PPP1R17O96001 155 aa-0.48□□□□□ -2.49
GYPB-210ENST00000508841 MYO7BQ6PIF6 2116 aa-0.48□□□□□ -2.49
GYPB-210ENST00000508841 EHBP1L1Q8N3D4 1523 aa-0.48□□□□□ -2.49
GYPB-210ENST00000508841 PREX2Q70Z35 1606 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 QRICH2Q9H0J4 1663 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 LRRC37A2A6NM11 1700 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 LY75O60449 1722 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 PSME4Q14997 1843 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 TRAV13-2A0A0B4J235 113 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 HCG22E2RYF7 251 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 PRM1P04553 51 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 DEFB109BQ30KR1 87 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 C12orf73Q69YU5 71 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 LINC01600Q96MT4 127 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 AGPAT4-IT1Q9H0P7 198 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 ATP10BO94823 1461 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 TULP4Q9NRJ4 1543 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 MAST1Q9Y2H9 1570 aa-0.49□□□□□ -2.49
GYPB-210ENST00000508841 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.49□□□□□ -2.49
GYPB-210ENST00000508841 C4AP0C0L4 1744 aa-0.5□□□□□ -2.49
GYPB-210ENST00000508841 C4BP0C0L5 1744 aa-0.5□□□□□ -2.49
GYPB-210ENST00000508841 PARP4Q9UKK3 1724 aaKnown RBP-0.5□□□□□ -2.49
GYPB-210ENST00000508841 K7EP34 96 aa-0.5□□□□□ -2.49
GYPB-210ENST00000508841 ARPC4P59998 168 aa-0.5□□□□□ -2.49
GYPB-210ENST00000508841 FDCSPQ8NFU4 85 aa-0.5□□□□□ -2.49
GYPB-210ENST00000508841 MAP3K4Q9Y6R4 1608 aa-0.5□□□□□ -2.49
GYPB-210ENST00000508841 WIZO95785 1651 aa-0.5□□□□□ -2.49
GYPB-210ENST00000508841 C20orf202A1L168 122 aa-0.51□□□□□ -2.49
GYPB-210ENST00000508841 COX6B1P14854 86 aa-0.51□□□□□ -2.49
GYPB-210ENST00000508841 TOPAZ1Q8N9V7 1692 aa-0.51□□□□□ -2.49
GYPB-210ENST00000508841 APLNQ9ULZ1 77 aa-0.51□□□□□ -2.49
GYPB-210ENST00000508841 SHANK2Q9UPX8 1470 aa-0.51□□□□□ -2.49
GYPB-210ENST00000508841 RAPGEF2Q9Y4G8 1499 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms