RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 PRDM15P57071 1507 aaPredicted RBP-0.18□□□□□ -2.44
COL4A3BP-205ENST00000508692 LINC00959A0A1B0GUT2 108 aa-0.18□□□□□ -2.44
COL4A3BP-205ENST00000508692 PDZD2O15018 2839 aa-0.18□□□□□ -2.44
COL4A3BP-205ENST00000508692 NKTRP30414 1462 aaKnown RBP-0.18□□□□□ -2.44
COL4A3BP-205ENST00000508692 BTAF1O14981 1849 aa-0.18□□□□□ -2.44
COL4A3BP-205ENST00000508692 SPTBN1Q01082 2364 aaKnown RBP-0.18□□□□□ -2.44
COL4A3BP-205ENST00000508692 SLIT1O75093 1534 aa-0.18□□□□□ -2.44
COL4A3BP-205ENST00000508692 ZFYVE16Q7Z3T8 1539 aa-0.18□□□□□ -2.44
COL4A3BP-205ENST00000508692 NUP188Q5SRE5 1749 aa-0.18□□□□□ -2.44
COL4A3BP-205ENST00000508692 PKD1L1Q8TDX9 2849 aa-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 PTPN23Q9H3S7 1636 aa-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 M0R2T5 61 aa-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 HMGN3Q15651 99 aa-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 FANCAO15360 1455 aa-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 PLEKHH2Q8IVE3 1493 aa-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 TEX14Q8IWB6 1497 aa-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 SHPRHQ149N8 1683 aa-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 CUX1P39880 1505 aa-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 EP300Q09472 2414 aaPredicted RBP-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 FAT2Q9NYQ8 4349 aa-0.19□□□□□ -2.44
COL4A3BP-205ENST00000508692 CC2D2AQ9P2K1 1620 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 TROQ12816 1431 aaPredicted RBP-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 PIEZO2Q9H5I5 2752 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 SCN7AQ01118 1682 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 COL4A6Q14031 1691 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 ZANQ9Y493 2812 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 CCL22O00626 93 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 SPRR2EP22531 72 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 S100PP25815 95 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 SEC11AP67812 179 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 ALKAL2Q6UX46 152 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 COX6B2Q6YFQ2 88 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 ADAMTS12P58397 1594 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 SAMD9Q5K651 1589 aa-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 FLNAP21333 2647 aaKnown RBP-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 TARBP1Q13395 1621 aaKnown RBP-0.2□□□□□ -2.44
COL4A3BP-205ENST00000508692 CHD1O14646 1710 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 FYCO1Q9BQS8 1478 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 MLH3Q9UHC1 1453 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 RAPGEF2Q9Y4G8 1499 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 BSNQ9UPA5 3926 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 LRP1BQ9NZR2 4599 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 TRBV25-1A0A075B6N4 114 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 TRAV30A0A087WSZ9 112 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 hADV29S1A0JD25 119 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 H3BQF6 201 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 KRTAP19-7Q3SYF9 63 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 DEFB105AQ8NG35 78 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 VAMP8Q9BV40 100 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 DOPEY1Q5JWR5 2465 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 SRRM2Q9UQ35 2752 aaKnown RBP-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 MUC2Q02817 5179 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 MARF1Q9Y4F3 1742 aaKnown RBP-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 ABCC5O15440 1437 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 CLIP1P30622 1438 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 VPS8Q8N3P4 1428 aa-0.21□□□□□ -2.44
COL4A3BP-205ENST00000508692 CHD6Q8TD26 2715 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 PAPPA2Q9BXP8 1791 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 TSC2P49815 1807 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 PEG3Q9GZU2 1588 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 MUC12Q9UKN1 5478 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 A0A0G2JND7 137 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 H0Y9P7 68 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 SYS1-DBNDD2H3BUS1 97 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 H7BZZ5 65 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 C9orf62Q8N4C0 152 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 LAMA5O15230 3695 aa-0.22□□□□□ -2.44
COL4A3BP-205ENST00000508692 LRRC9Q6ZRR7 1453 aa-0.22□□□□□ -2.45
COL4A3BP-205ENST00000508692 ALKQ9UM73 1620 aa-0.23□□□□□ -2.45
COL4A3BP-205ENST00000508692 TENM2Q9NT68 2774 aa-0.23□□□□□ -2.45
COL4A3BP-205ENST00000508692 A0A1B0GU69 56 aa-0.23□□□□□ -2.45
COL4A3BP-205ENST00000508692 LOC730098B7Z3J9 87 aa-0.23□□□□□ -2.45
COL4A3BP-205ENST00000508692 LINC00032P0C843 101 aa-0.23□□□□□ -2.45
COL4A3BP-205ENST00000508692 PMCHL1Q16048 86 aa-0.23□□□□□ -2.45
COL4A3BP-205ENST00000508692 TRGV9Q99603 122 aa-0.23□□□□□ -2.45
COL4A3BP-205ENST00000508692 TCEAL7Q9BRU2 100 aa-0.23□□□□□ -2.45
COL4A3BP-205ENST00000508692 CRIPTQ9P021 101 aa-0.23□□□□□ -2.45
COL4A3BP-205ENST00000508692 GVINP1Q7Z2Y8 2422 aa-0.23□□□□□ -2.45
COL4A3BP-205ENST00000508692 DCHS2Q6V1P9 2916 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 TRBV7-7A0A0K0K1E9 115 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 CPSF4LA6NMK7 179 aaKnown RBP-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 I3L3M4 83 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 ATOX1O00244 68 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 MT1AP04731 61 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 ARMS2P0C7Q2 107 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 DEFB135Q30KP9 77 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 KRTAP6-2Q3LI66 62 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 PSMG4Q5JS54 123 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 C6orf201Q7Z4U5 140 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 ACBD7Q8N6N7 88 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 SERP2Q8N6R1 65 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 LCN9Q8WX39 176 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 CACFD1Q9UGQ2 172 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 FLGP20930 4061 aaPredicted RBP-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 CCDC88BA6NC98 1476 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 CICQ96RK0 1608 aaPredicted RBP-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 PRKDCP78527 4128 aaKnown RBP-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 RGPD8O14715 1765 aaPredicted RBP-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 RGPD5Q99666 1765 aa-0.24□□□□□ -2.45
COL4A3BP-205ENST00000508692 FLNBO75369 2602 aaKnown RBP-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms