RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CACNA1DQ01668 2161 aa4.72□□□□□ -1.65
PDGFRA-206ENST00000508170 OTOGLQ3ZCN5 2332 aa4.72□□□□□ -1.65
PDGFRA-206ENST00000508170 A0A1B0GU33 70 aa4.72□□□□□ -1.65
PDGFRA-206ENST00000508170 GVINP1Q7Z2Y8 2422 aa4.72□□□□□ -1.65
PDGFRA-206ENST00000508170 LAMA5O15230 3695 aa4.71□□□□□ -1.65
PDGFRA-206ENST00000508170 NCOR2Q9Y618 2525 aa4.71□□□□□ -1.65
PDGFRA-206ENST00000508170 TRAV23DV6A0A075B6W5 121 aa4.71□□□□□ -1.66
PDGFRA-206ENST00000508170 A0A1W2PNU3 283 aaPredicted RBP4.71□□□□□ -1.66
PDGFRA-206ENST00000508170 HIGD1CA8MV81 97 aa4.71□□□□□ -1.66
PDGFRA-206ENST00000508170 UBE2D1P51668 147 aa4.71□□□□□ -1.66
PDGFRA-206ENST00000508170 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.71□□□□□ -1.66
PDGFRA-206ENST00000508170 CNOT1A5YKK6 2376 aaKnown RBP4.71□□□□□ -1.66
PDGFRA-206ENST00000508170 CEP250Q9BV73 2442 aa4.7□□□□□ -1.66
PDGFRA-206ENST00000508170 DEFB108AA8MXU0 73 aa4.7□□□□□ -1.66
PDGFRA-206ENST00000508170 ZNF137PP52743 207 aa4.7□□□□□ -1.66
PDGFRA-206ENST00000508170 Q6JHZ5 121 aa4.7□□□□□ -1.66
PDGFRA-206ENST00000508170 KRTAP26-1Q6PEX3 210 aa4.7□□□□□ -1.66
PDGFRA-206ENST00000508170 NDUFA11Q86Y39 141 aa4.7□□□□□ -1.66
PDGFRA-206ENST00000508170 DSPP15924 2871 aaKnown RBP4.69□□□□□ -1.66
PDGFRA-206ENST00000508170 CSAG1Q6PB30 78 aa4.69□□□□□ -1.66
PDGFRA-206ENST00000508170 KLK12Q9UKR0 248 aa4.69□□□□□ -1.66
PDGFRA-206ENST00000508170 USP24Q9UPU5 2620 aa4.69□□□□□ -1.66
PDGFRA-206ENST00000508170 GCN1Q92616 2671 aaKnown RBP4.69□□□□□ -1.66
PDGFRA-206ENST00000508170 IGHV3OR16-8A0A075B7F1 116 aa4.69□□□□□ -1.66
PDGFRA-206ENST00000508170 RTL8CO15255 209 aa4.69□□□□□ -1.66
PDGFRA-206ENST00000508170 LINC00167Q96N53 147 aa4.69□□□□□ -1.66
PDGFRA-206ENST00000508170 NBEAQ8NFP9 2946 aa4.68□□□□□ -1.66
PDGFRA-206ENST00000508170 A0A1W2PNM2 257 aa4.68□□□□□ -1.66
PDGFRA-206ENST00000508170 IFI27P40305 119 aaPredicted RBP4.68□□□□□ -1.66
PDGFRA-206ENST00000508170 UBE2D4Q9Y2X8 147 aa4.68□□□□□ -1.66
PDGFRA-206ENST00000508170 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
PDGFRA-206ENST00000508170 PRR14LQ5THK1 2151 aa4.67□□□□□ -1.66
PDGFRA-206ENST00000508170 LOC400499M0QZD8 3231 aa4.67□□□□□ -1.66
PDGFRA-206ENST00000508170 IGLV1-47P01700 117 aa4.67□□□□□ -1.66
PDGFRA-206ENST00000508170 A0A0J9YX75 114 aa4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 LOC101927531A0A1B0GV80 90 aa4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 ZNF833PQ6ZTB9 187 aa4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 C9orf163Q8N9P6 203 aa4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 ST20-AS1Q8NBB2 130 aa4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 TEP1Q99973 2627 aaKnown RBP4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 DMXL2Q8TDJ6 3036 aa4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 AKAP13Q12802 2813 aa4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 HIGD2BQ4VC39 106 aa4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 RPL39P5Q59GN2 51 aa4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 NDUFA4L2Q9NRX3 87 aa4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 HEATR1Q9H583 2144 aaKnown RBP4.66□□□□□ -1.66
PDGFRA-206ENST00000508170 TRBV6-8A0A0A6YYG3 113 aa4.65□□□□□ -1.66
PDGFRA-206ENST00000508170 TRAV12-1A0A0B4J245 112 aa4.65□□□□□ -1.66
PDGFRA-206ENST00000508170 CLPSL1A2RUU4 121 aa4.65□□□□□ -1.66
PDGFRA-206ENST00000508170 IGKV3-15P01624 115 aa4.65□□□□□ -1.66
PDGFRA-206ENST00000508170 PSCAO43653 123 aa4.65□□□□□ -1.67
PDGFRA-206ENST00000508170 C2orf82Q6UX34 121 aa4.65□□□□□ -1.67
PDGFRA-206ENST00000508170 INTS1Q8N201 2190 aaKnown RBP4.65□□□□□ -1.67
PDGFRA-206ENST00000508170 ZZEF1O43149 2961 aa4.64□□□□□ -1.67
PDGFRA-206ENST00000508170 ERHP84090 104 aaKnown RBP4.64□□□□□ -1.67
PDGFRA-206ENST00000508170 C10orf113Q5VZT2 155 aa4.64□□□□□ -1.67
PDGFRA-206ENST00000508170 LINC00322Q6ZN03 302 aaPredicted RBP4.64□□□□□ -1.67
PDGFRA-206ENST00000508170 DEFB124Q8NES8 71 aa4.64□□□□□ -1.67
PDGFRA-206ENST00000508170 GFRA4Q9GZZ7 299 aa4.64□□□□□ -1.67
PDGFRA-206ENST00000508170 CEP295Q9C0D2 2601 aa4.63□□□□□ -1.67
PDGFRA-206ENST00000508170 TRBV10-1A0A0K0K1A3 114 aa4.63□□□□□ -1.67
PDGFRA-206ENST00000508170 ZNF861PO60384 105 aa4.63□□□□□ -1.67
PDGFRA-206ENST00000508170 CADP27708 2225 aa4.63□□□□□ -1.67
PDGFRA-206ENST00000508170 ARMS2P0C7Q2 107 aa4.62□□□□□ -1.67
PDGFRA-206ENST00000508170 PTPN13Q12923 2485 aa4.62□□□□□ -1.67
PDGFRA-206ENST00000508170 IGHV3-33P01772 117 aa4.62□□□□□ -1.67
PDGFRA-206ENST00000508170 ATXN8Q156A1 80 aa4.62□□□□□ -1.67
PDGFRA-206ENST00000508170 MGAQ8IWI9 3026 aa4.61□□□□□ -1.67
PDGFRA-206ENST00000508170 A0A1B0GUT8 65 aa4.61□□□□□ -1.67
PDGFRA-206ENST00000508170 PRCDQ00LT1 54 aa4.61□□□□□ -1.67
PDGFRA-206ENST00000508170 FDCSPQ8NFU4 85 aa4.61□□□□□ -1.67
PDGFRA-206ENST00000508170 LEAP2Q969E1 77 aa4.61□□□□□ -1.67
PDGFRA-206ENST00000508170 BOD1L1Q8NFC6 3051 aa4.61□□□□□ -1.67
PDGFRA-206ENST00000508170 DOPEY1Q5JWR5 2465 aa4.61□□□□□ -1.67
PDGFRA-206ENST00000508170 ANKRD17O75179 2603 aaKnown RBP4.61□□□□□ -1.67
PDGFRA-206ENST00000508170 PLCE1Q9P212 2302 aa4.6□□□□□ -1.67
PDGFRA-206ENST00000508170 ICE1Q9Y2F5 2266 aa4.6□□□□□ -1.67
PDGFRA-206ENST00000508170 D6R8Y8 96 aa4.6□□□□□ -1.67
PDGFRA-206ENST00000508170 K7EMI3 77 aa4.6□□□□□ -1.67
PDGFRA-206ENST00000508170 SAA2P0DJI9 122 aaPredicted RBP4.6□□□□□ -1.67
PDGFRA-206ENST00000508170 RP1L1Q8IWN7 2480 aaPredicted RBP4.6□□□□□ -1.67
PDGFRA-206ENST00000508170 ZFYVE26Q68DK2 2539 aa4.6□□□□□ -1.67
PDGFRA-206ENST00000508170 ATP5EP2Q5VTU8 51 aa4.6□□□□□ -1.67
PDGFRA-206ENST00000508170 Q86TA4 180 aa4.6□□□□□ -1.67
PDGFRA-206ENST00000508170 SPENQ96T58 3664 aaKnown RBP4.59□□□□□ -1.67
PDGFRA-206ENST00000508170 TNCP24821 2201 aa4.59□□□□□ -1.67
PDGFRA-206ENST00000508170 MUSTN1Q8IVN3 82 aa4.59□□□□□ -1.67
PDGFRA-206ENST00000508170 SNURFQ9Y675 71 aa4.59□□□□□ -1.67
PDGFRA-206ENST00000508170 ATMQ13315 3056 aa4.59□□□□□ -1.68
PDGFRA-206ENST00000508170 A0A0J9YWU9 116 aa4.58□□□□□ -1.68
PDGFRA-206ENST00000508170 FCER1GP30273 86 aa4.58□□□□□ -1.68
PDGFRA-206ENST00000508170 MRPL36Q9P0J6 103 aaKnown RBP4.58□□□□□ -1.68
PDGFRA-206ENST00000508170 CNBPP62633 177 aaKnown RBP4.58□□□□□ -1.68
PDGFRA-206ENST00000508170 PRR34Q9NV39 138 aa4.58□□□□□ -1.68
PDGFRA-206ENST00000508170 ELOF1P60002 83 aaKnown RBP4.57□□□□□ -1.68
PDGFRA-206ENST00000508170 C1orf137Q5JT78 98 aa4.57□□□□□ -1.68
PDGFRA-206ENST00000508170 IGF2RP11717 2491 aa4.57□□□□□ -1.68
PDGFRA-206ENST00000508170 KPRPQ5T749 579 aaPredicted RBP4.57□□□□□ -1.68
PDGFRA-206ENST00000508170 LINC01549A6NIU2 74 aa4.56□□□□□ -1.68
PDGFRA-206ENST00000508170 DEFB109BQ30KR1 87 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms