RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 DNAL4O96015 105 aa8.27□□□□□ -1.09
UBE3D-206ENST00000505226 SS18Q15532 418 aa8.27□□□□□ -1.09
UBE3D-206ENST00000505226 C9orf153Q5TBE3 101 aa8.27□□□□□ -1.09
UBE3D-206ENST00000505226 TMEM126AQ9H061 195 aa8.27□□□□□ -1.09
UBE3D-206ENST00000505226 PAX4O43316 350 aa8.26□□□□□ -1.09
UBE3D-206ENST00000505226 CYSTM1Q9H1C7 97 aa8.26□□□□□ -1.09
UBE3D-206ENST00000505226 IGKV3D-7A0A0C4DH55 119 aa8.26□□□□□ -1.09
UBE3D-206ENST00000505226 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
UBE3D-206ENST00000505226 UQCRQO14949 82 aa8.26□□□□□ -1.09
UBE3D-206ENST00000505226 PRR3P79522 188 aaKnown RBP8.26□□□□□ -1.09
UBE3D-206ENST00000505226 LINC00526Q96FQ7 95 aa8.26□□□□□ -1.09
UBE3D-206ENST00000505226 OR13C6PQ8NH95 151 aa8.25□□□□□ -1.09
UBE3D-206ENST00000505226 H0YGX0 51 aa8.25□□□□□ -1.09
UBE3D-206ENST00000505226 ANK3Q12955 4377 aaKnown RBP8.25□□□□□ -1.09
UBE3D-206ENST00000505226 MTORP42345 2549 aa8.24□□□□□ -1.09
UBE3D-206ENST00000505226 A0A087WVE0 104 aa8.24□□□□□ -1.09
UBE3D-206ENST00000505226 XCL1P47992 114 aa8.24□□□□□ -1.09
UBE3D-206ENST00000505226 ACANP16112 2415 aa8.23□□□□□ -1.09
UBE3D-206ENST00000505226 NANOS2P60321 138 aaKnown RBP8.23□□□□□ -1.09
UBE3D-206ENST00000505226 BBC3Q96PG8 261 aaPredicted RBP8.23□□□□□ -1.09
UBE3D-206ENST00000505226 LY6G6DO95868 133 aa8.23□□□□□ -1.09
UBE3D-206ENST00000505226 COX7CP15954 63 aa8.23□□□□□ -1.09
UBE3D-206ENST00000505226 CLPSL2Q6UWE3 100 aa8.23□□□□□ -1.09
UBE3D-206ENST00000505226 C6orf226Q5I0X4 101 aa8.23□□□□□ -1.09
UBE3D-206ENST00000505226 DEFB130BP0DP73 79 aa8.22□□□□□ -1.09
UBE3D-206ENST00000505226 DEFB130AP0DP74 79 aa8.22□□□□□ -1.09
UBE3D-206ENST00000505226 TMEM86BQ8N661 226 aa8.22□□□□□ -1.09
UBE3D-206ENST00000505226 VWFP04275 2813 aa8.22□□□□□ -1.09
UBE3D-206ENST00000505226 IGLV1-51P01701 117 aa8.22□□□□□ -1.09
UBE3D-206ENST00000505226 LINC01561Q8N1V8 128 aa8.21□□□□□ -1.09
UBE3D-206ENST00000505226 WFDC11Q8NEX6 87 aa8.21□□□□□ -1.1
UBE3D-206ENST00000505226 LOC107984640A0A0U1RRK4 108 aa8.21□□□□□ -1.1
UBE3D-206ENST00000505226 LINC01006Q8NI28 216 aa8.21□□□□□ -1.1
UBE3D-206ENST00000505226 A0A096LPF7 62 aa8.2□□□□□ -1.1
UBE3D-206ENST00000505226 hADV29S1A0JD25 119 aa8.2□□□□□ -1.1
UBE3D-206ENST00000505226 Q6JHZ5 121 aa8.2□□□□□ -1.1
UBE3D-206ENST00000505226 Q8NDZ9 215 aa8.2□□□□□ -1.1
UBE3D-206ENST00000505226 GYPEP15421 78 aa8.19□□□□□ -1.1
UBE3D-206ENST00000505226 Q8N3U1 123 aa8.19□□□□□ -1.1
UBE3D-206ENST00000505226 CRYGAP11844 174 aa8.19□□□□□ -1.1
UBE3D-206ENST00000505226 RPL18AQ02543 176 aaKnown RBP8.19□□□□□ -1.1
UBE3D-206ENST00000505226 ORMDL1Q9P0S3 153 aa8.18□□□□□ -1.1
UBE3D-206ENST00000505226 ATOX1O00244 68 aa8.18□□□□□ -1.1
UBE3D-206ENST00000505226 A0A1B0GX51 115 aa8.18□□□□□ -1.1
UBE3D-206ENST00000505226 C9orf116Q5BN46 136 aaPredicted RBP8.18□□□□□ -1.1
UBE3D-206ENST00000505226 PDZD2O15018 2839 aa8.17□□□□□ -1.1
UBE3D-206ENST00000505226 Q8IZM0 81 aa8.17□□□□□ -1.1
UBE3D-206ENST00000505226 LINC00167Q96N53 147 aa8.17□□□□□ -1.1
UBE3D-206ENST00000505226 KIAA0087Q14695 138 aa8.17□□□□□ -1.1
UBE3D-206ENST00000505226 TENM4Q6N022 2769 aa8.17□□□□□ -1.1
UBE3D-206ENST00000505226 CCKP06307 115 aa8.16□□□□□ -1.1
UBE3D-206ENST00000505226 Q8N814 137 aa8.16□□□□□ -1.1
UBE3D-206ENST00000505226 CMC4P56277 68 aaPredicted RBP8.16□□□□□ -1.1
UBE3D-206ENST00000505226 WFDC9Q8NEX5 89 aa8.16□□□□□ -1.1
UBE3D-206ENST00000505226 A0A1B0GUV1 79 aa8.16□□□□□ -1.1
UBE3D-206ENST00000505226 HILS1P60008 231 aa8.16□□□□□ -1.1
UBE3D-206ENST00000505226 UPK3BQ9BT76 320 aa8.16□□□□□ -1.1
UBE3D-206ENST00000505226 LINC00612Q8N6U2 182 aa8.15□□□□□ -1.1
UBE3D-206ENST00000505226 IGLV10-54A0A075B6I4 117 aa8.14□□□□□ -1.11
UBE3D-206ENST00000505226 LINC00269Q8N2A0 174 aa8.14□□□□□ -1.11
UBE3D-206ENST00000505226 USP17L23D6RBM5 183 aa8.14□□□□□ -1.11
UBE3D-206ENST00000505226 KIR2DL5BQ8NHK3 375 aa8.14□□□□□ -1.11
UBE3D-206ENST00000505226 ITPR2Q14571 2701 aa8.13□□□□□ -1.11
UBE3D-206ENST00000505226 X6R8D5 127 aa8.13□□□□□ -1.11
UBE3D-206ENST00000505226 ZNF843Q8N446 348 aa8.13□□□□□ -1.11
UBE3D-206ENST00000505226 KRTAP1-1Q07627 177 aa8.12□□□□□ -1.11
UBE3D-206ENST00000505226 SERP2Q8N6R1 65 aa8.12□□□□□ -1.11
UBE3D-206ENST00000505226 C16orf95Q9H693 158 aa8.12□□□□□ -1.11
UBE3D-206ENST00000505226 C6orf99Q4VX62 202 aa8.11□□□□□ -1.11
UBE3D-206ENST00000505226 FAM19A1Q7Z5A9 133 aa8.11□□□□□ -1.11
UBE3D-206ENST00000505226 SPATA3Q8NHX4 192 aa8.11□□□□□ -1.11
UBE3D-206ENST00000505226 CHCHD10Q8WYQ3 142 aaPredicted RBP8.11□□□□□ -1.11
UBE3D-206ENST00000505226 DEFB4AO15263 64 aa8.11□□□□□ -1.11
UBE3D-206ENST00000505226 NDUFC2O95298 119 aa8.1□□□□□ -1.11
UBE3D-206ENST00000505226 RNASE1P07998 156 aaKnown RBP8.1□□□□□ -1.11
UBE3D-206ENST00000505226 C10orf25Q5T742 122 aa8.1□□□□□ -1.11
UBE3D-206ENST00000505226 CD164L2Q6UWJ8 174 aa8.1□□□□□ -1.11
UBE3D-206ENST00000505226 PRO0255Q9UI72 69 aa8.1□□□□□ -1.11
UBE3D-206ENST00000505226 TMEM256-PLSCR3K7ERE1 68 aa8.1□□□□□ -1.11
UBE3D-206ENST00000505226 KRTAP10-3P60369 221 aa8.1□□□□□ -1.11
UBE3D-206ENST00000505226 C6orf223Q8N319 242 aa8.1□□□□□ -1.11
UBE3D-206ENST00000505226 JMJD7-PLA2G4BH0Y9G9 81 aa8.09□□□□□ -1.11
UBE3D-206ENST00000505226 M0R2N4 97 aa8.09□□□□□ -1.11
UBE3D-206ENST00000505226 IGHV4-28A0A0C4DH34 117 aa8.09□□□□□ -1.11
UBE3D-206ENST00000505226 ENHOQ6UWT2 76 aa8.09□□□□□ -1.11
UBE3D-206ENST00000505226 FAM19A5Q7Z5A7 132 aaPredicted RBP8.09□□□□□ -1.11
UBE3D-206ENST00000505226 COX17Q14061 63 aa8.08□□□□□ -1.12
UBE3D-206ENST00000505226 LYPD5Q6UWN5 251 aa8.08□□□□□ -1.12
UBE3D-206ENST00000505226 J3KT08 172 aa8.08□□□□□ -1.12
UBE3D-206ENST00000505226 OXTP01178 125 aa8.08□□□□□ -1.12
UBE3D-206ENST00000505226 ANGP03950 147 aaKnown RBP8.08□□□□□ -1.12
UBE3D-206ENST00000505226 TRAV23DV6A0A075B6W5 121 aa8.07□□□□□ -1.12
UBE3D-206ENST00000505226 REG3AQ06141 175 aa8.07□□□□□ -1.12
UBE3D-206ENST00000505226 LINC00575Q6W349 94 aa8.07□□□□□ -1.12
UBE3D-206ENST00000505226 LINC00482Q8N8I6 264 aa8.07□□□□□ -1.12
UBE3D-206ENST00000505226 UNQ6190/PRO20217Q6UXQ8 127 aa8.07□□□□□ -1.12
UBE3D-206ENST00000505226 DPH3Q96FX2 82 aa8.06□□□□□ -1.12
UBE3D-206ENST00000505226 TENM1Q9UKZ4 2725 aa8.06□□□□□ -1.12
UBE3D-206ENST00000505226 DSCR8Q96T75 97 aa8.05□□□□□ -1.12
UBE3D-206ENST00000505226 GHRHP01286 108 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms