RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 NTM-AS1Q6ZSK4 140 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 VSIG2Q96IQ7 327 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 LINC00587B1AMM8 73 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 E9PLD3 99 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 H3BRM9 83 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 DEFB4AO15263 64 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 UBE2D1P51668 147 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 HERVK_113P63121 156 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 MAJINQ3KP22 176 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 DEFB121Q5J5C9 76 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 LELP1Q5T871 98 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 Q6ZUT4 128 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 BOD1L2Q8IYS8 172 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 FAM104AQ969W3 186 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 C14orf144Q96I85 54 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 CHAC1Q9BUX1 264 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 RETNQ9HD89 108 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 CDC42SE2Q9NRR3 84 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 HIGD1BQ9P298 99 aa3.27□□□□□ -1.89
DEPDC1B-203ENST00000505017 TRAV10A0A0B4J240 114 aa3.26□□□□□ -1.89
DEPDC1B-203ENST00000505017 M0R143 59 aa3.26□□□□□ -1.89
DEPDC1B-203ENST00000505017 ZNF22P17026 224 aaPredicted RBP3.26□□□□□ -1.89
DEPDC1B-203ENST00000505017 NMUP48645 174 aa3.26□□□□□ -1.89
DEPDC1B-203ENST00000505017 C15orf53Q8NAA6 179 aa3.26□□□□□ -1.89
DEPDC1B-203ENST00000505017 DEFB104AQ8WTQ1 72 aa3.26□□□□□ -1.89
DEPDC1B-203ENST00000505017 PLEKHB2Q96CS7 222 aa3.26□□□□□ -1.89
DEPDC1B-203ENST00000505017 B9D2Q9BPU9 175 aa3.26□□□□□ -1.89
DEPDC1B-203ENST00000505017 GEMIN7Q9H840 131 aaKnown RBP3.26□□□□□ -1.89
DEPDC1B-203ENST00000505017 DEFB131BA0A096LNP1 70 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 A0A096LPF7 62 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 TRAV8-6A0A0B4J262 113 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 A0A0J9YXV3 536 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 A0A0J9YY99 117 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 TMEM223A0PJW6 202 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 LEPROTO15243 131 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 HTN3P15516 51 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 TMEM170BQ5T4T1 132 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 LINC01561Q8N1V8 128 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 MRAPQ8TCY5 172 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 ANAPC11Q9NYG5 84 aa3.25□□□□□ -1.89
DEPDC1B-203ENST00000505017 IGKV2D-26A0A0A0MRZ7 120 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 IGHV1-58A0A0C4DH39 117 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 MYMXA0A1B0GTQ4 84 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 J3QQQ9 107 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 PRB2P02812 416 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 LGALS3P17931 250 aaKnown RBP3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 NDUFV3P56181 108 aaKnown RBP3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 RBX1P62877 108 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 CTAG1AP78358 180 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 HSD52Q0P140 79 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 TAL2Q16559 108 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 CEMP1Q6PRD7 247 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 SFTA2Q6UW10 78 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 C2orf91Q6ZV80 131 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 PCP2Q8IVA1 136 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 LINC00469Q8N7U9 141 aa3.24□□□□□ -1.89
DEPDC1B-203ENST00000505017 TENM3Q9P273 2699 aa3.23□□□□□ -1.89
DEPDC1B-203ENST00000505017 IGLV4-60A0A075B6I1 120 aa3.23□□□□□ -1.89
DEPDC1B-203ENST00000505017 TRAV13-1A0A0B4J241 112 aa3.23□□□□□ -1.89
DEPDC1B-203ENST00000505017 ZNF815PA8K554 130 aa3.23□□□□□ -1.89
DEPDC1B-203ENST00000505017 TMEM262E9PQX1 116 aa3.23□□□□□ -1.89
DEPDC1B-203ENST00000505017 SS18Q15532 418 aa3.23□□□□□ -1.89
DEPDC1B-203ENST00000505017 MPV17L2Q567V2 206 aa3.23□□□□□ -1.89
DEPDC1B-203ENST00000505017 RNASE13Q5GAN3 156 aaKnown RBP3.23□□□□□ -1.89
DEPDC1B-203ENST00000505017 LYPD5Q6UWN5 251 aa3.23□□□□□ -1.89
DEPDC1B-203ENST00000505017 HUWE1Q7Z6Z7 4374 aaKnown RBP3.23□□□□□ -1.89
DEPDC1B-203ENST00000505017 A0A087WZ39 114 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 TRAV8-4A0A0B4J246 113 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 IGHV3OR16-9A0A0B4J2B5 98 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 LINC00959A0A1B0GUT2 108 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 K7EP13 123 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 TIMM17BO60830 172 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 IGHV3-30-3P0DP02 117 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 TCTAP57738 103 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 COL5A1-AS1Q5SY13 56 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 ZFAND6Q6FIF0 208 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 SCGB1D4Q6XE38 83 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 SNHG12Q9BXW3 62 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 SPANXB1Q9NS25 103 aaPredicted RBP3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 CDKN2A-AS1Q9UH64 79 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 DNAH9Q9NYC9 4486 aa3.22□□□□□ -1.89
DEPDC1B-203ENST00000505017 A0A0J9YXY3 114 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 A6NDN8 102 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 TMEM238C9JI98 176 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 NDUFA1O15239 70 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 ANGP03950 147 aaKnown RBP3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 HERV-K104P63124 156 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 COX6A2Q02221 97 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 REG3AQ06141 175 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 MIAQ16674 131 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 LINC01556Q5JQF7 62 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 BVES-AS1Q5T3Y7 98 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 CD164L2Q6UWJ8 174 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 ORAOV1Q8WV07 137 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 COPS9Q8WXC6 57 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 LINC00167Q96N53 147 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 UPK3BQ9BT76 320 aa3.21□□□□□ -1.9
DEPDC1B-203ENST00000505017 PPDPFQ9H3Y8 114 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms