RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 HRNRQ86YZ3 2850 aaPredicted RBP0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 XRN1Q8IZH2 1706 aaKnown RBP0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 ABCA2Q9BZC7 2435 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 TRAV30A0A087WSZ9 112 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 LOC730098B7Z3J9 87 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 SPINK4O60575 86 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 MPC2O95563 127 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 SPRR1AP35321 89 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 RBP2P50120 134 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 GNGT1P63211 74 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 PMCHL1Q16048 86 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 ACBD7Q8N6N7 88 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 PMCHL2Q9BQD1 86 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 LINC00846Q9NV44 126 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 ABCC2Q92887 1545 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 PKD1L2Q7Z442 2459 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 SPTBN1Q01082 2364 aaKnown RBP0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 NSD3Q9BZ95 1437 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 CNTLNQ9NXG0 1405 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 PIEZO2Q9H5I5 2752 aa0.11□□□□□ -2.39
UBE2D3-218ENST00000505009 ADGRL2O95490 1459 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 MLH3Q9UHC1 1453 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 ZFHX3Q15911 3703 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 WNK2Q9Y3S1 2297 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 TRBV25-1A0A075B6N4 114 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 A0A087WVE0 104 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 UQCRHLA0A096LP55 91 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 A0A0G2JND7 137 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 A0A1B0GU69 56 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 C7orf77A4D0Y5 90 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 ATP6V1G2-DDX39BF2Z307 99 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 COL5A1-AS1Q5SY13 56 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 C14orf144Q96I85 54 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 TRGV9Q99603 122 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 CACFD1Q9UGQ2 172 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 HYDINQ4G0P3 5121 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 VWFP04275 2813 aa0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 LRP1Q07954 4544 aaKnown RBP0.1□□□□□ -2.39
UBE2D3-218ENST00000505009 COL7A1Q02388 2944 aa0.09□□□□□ -2.39
UBE2D3-218ENST00000505009 K7EQZ3 153 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 SPRR1BP22528 89 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 ZNF720Q7Z2F6 126 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 C6orf201Q7Z4U5 140 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 DEFB123Q8N688 67 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 DPY30Q9C005 99 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 ABCC5O15440 1437 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 SONP18583 2426 aaKnown RBP0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 PLEKHH2Q8IVE3 1493 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 NLRP1Q9C000 1473 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 RAPGEF2Q9Y4G8 1499 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 KIAA0556O60303 1618 aa0.09□□□□□ -2.4
UBE2D3-218ENST00000505009 CLTCQ00610 1675 aaKnown RBP0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 COL4A6Q14031 1691 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 FAT3Q8TDW7 4589 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 TULP4Q9NRJ4 1543 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 KNDC1Q76NI1 1749 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 EDC4Q6P2E9 1401 aaKnown RBP0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 LINC00959A0A1B0GUT2 108 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 H0Y9P7 68 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 M0R143 59 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 S100A8P05109 93 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 FAUP35544 74 aaKnown RBP0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 ETDBQ3ZM63 59 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 DEFB107AQ8IZN7 70 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 SERP2Q8N6R1 65 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 DEFB105AQ8NG35 78 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 LCN9Q8WX39 176 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 CRIPTQ9P021 101 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 FLNCQ14315 2725 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 ANKRD36A6QL64 1941 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 COL14A1Q05707 1796 aaKnown RBP0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 TEX14Q8IWB6 1497 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 KIF20BQ96Q89 1820 aa0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 PRDM15P57071 1507 aaPredicted RBP0.08□□□□□ -2.4
UBE2D3-218ENST00000505009 ANKRD36BQ8N2N9 1353 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 MON2Q7Z3U7 1717 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 AKAP12Q02952 1782 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 NSD1Q96L73 2696 aaPredicted RBP0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 I3L3M4 83 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 MT-ATP8P03928 68 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 ARMS2P0C7Q2 107 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 ASIPP42127 132 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 SMIM11AP58511 58 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 HMGN3Q15651 99 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 C5P01031 1676 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 SHPRHQ149N8 1683 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 SPTA1P02549 2419 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 URB1O60287 2271 aaKnown RBP0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 LRRC37AA6NMS7 1700 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 HIVEP1P15822 2718 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 CHD6Q8TD26 2715 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 CSMD3Q7Z407 3707 aa0.07□□□□□ -2.4
UBE2D3-218ENST00000505009 PAPPA2Q9BXP8 1791 aa0.06□□□□□ -2.4
UBE2D3-218ENST00000505009 CELSR1Q9NYQ6 3014 aa0.06□□□□□ -2.4
UBE2D3-218ENST00000505009 PKD1L1Q8TDX9 2849 aa0.06□□□□□ -2.4
UBE2D3-218ENST00000505009 GVINP1Q7Z2Y8 2422 aa0.06□□□□□ -2.4
UBE2D3-218ENST00000505009 TARBP1Q13395 1621 aaKnown RBP0.06□□□□□ -2.4
UBE2D3-218ENST00000505009 VPS8Q8N3P4 1428 aa0.06□□□□□ -2.4
UBE2D3-218ENST00000505009 CSPG4Q6UVK1 2322 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 859 ms