RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 TMEM61Q8N0U2 210 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 LINC01560Q8TB33 94 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 C7orf33Q8WU49 177 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 RHPN1-AS1Q9BWJ2 59 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 EDA2RQ9HAV5 297 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 DAZ1Q9NQZ3 744 aaKnown RBP2.92□□□□□ -1.94
RFC1-208ENST00000504849 NDUFA12Q9UI09 145 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 TNCP24821 2201 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 APCP25054 2843 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 A0A0J9YXV3 536 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 TEX49A0A1B0GTD5 131 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 TINCRA0A1B0GVN0 87 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 KRTAP4-16G5E9R7 235 aaPredicted RBP2.91□□□□□ -1.94
RFC1-208ENST00000504849 M0QY20 66 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 INAFM2P0DMQ5 153 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 IGHV3-30-3P0DP02 117 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 CXCL5P42830 114 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 MRPS36P82909 103 aaKnown RBP2.91□□□□□ -1.94
RFC1-208ENST00000504849 LINC00643Q86TS7 51 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 SMIM20Q8N5G0 67 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 C11orf72Q8NBR9 251 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 JMJD1CQ15652 2540 aa2.91□□□□□ -1.94
RFC1-208ENST00000504849 AKAP9Q99996 3911 aa2.9□□□□□ -1.94
RFC1-208ENST00000504849 NBEAL2Q6ZNJ1 2754 aa2.9□□□□□ -1.94
RFC1-208ENST00000504849 MED13Q9UHV7 2174 aa2.9□□□□□ -1.94
RFC1-208ENST00000504849 IGHV3-64A0A075B6Q5 118 aa2.9□□□□□ -1.95
RFC1-208ENST00000504849 TRAV12-3A0A0B4J271 114 aa2.9□□□□□ -1.95
RFC1-208ENST00000504849 H0Y9J4 135 aa2.9□□□□□ -1.95
RFC1-208ENST00000504849 J3QLI3 93 aa2.9□□□□□ -1.95
RFC1-208ENST00000504849 UQCRQO14949 82 aa2.9□□□□□ -1.95
RFC1-208ENST00000504849 NDUFA1O15239 70 aa2.9□□□□□ -1.95
RFC1-208ENST00000504849 C9orf153Q5TBE3 101 aa2.9□□□□□ -1.95
RFC1-208ENST00000504849 UNQ9165/PRO28630Q6UXU0 137 aa2.9□□□□□ -1.95
RFC1-208ENST00000504849 Q6ZQT7 251 aa2.9□□□□□ -1.95
RFC1-208ENST00000504849 DNAJC30Q96LL9 226 aa2.9□□□□□ -1.95
RFC1-208ENST00000504849 NBASA2RRP1 2371 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 TRAV8-3A0A0A6YYJ7 113 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 FAM236AA0A1B0GUQ0 79 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 FAM236BA0A1B0GV22 79 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 J3KT08 172 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 ATOX1O00244 68 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 COX7A2LO14548 114 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 LY6HO94772 140 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 TRACP01848 142 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 SYNJ2BPP57105 145 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 FAM222AQ5U5X8 452 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 C3orf22Q8N5N4 141 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 DAND5Q8N907 189 aa2.89□□□□□ -1.95
RFC1-208ENST00000504849 CCDC168Q8NDH2 2452 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 IGKV3-7A0A075B6H7 116 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 A0A1B0GX51 115 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 DNAL4O96015 105 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 IGHV3-11P01762 117 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 IGHG2P01859 326 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 KRTAP10-1P60331 282 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 HERVK_113P63121 156 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 OR13C6PQ8NH95 151 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 LINC00526Q96FQ7 95 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 LINC01587Q99440 93 aa2.88□□□□□ -1.95
RFC1-208ENST00000504849 HEATR1Q9H583 2144 aaKnown RBP2.87□□□□□ -1.95
RFC1-208ENST00000504849 INTS1Q8N201 2190 aaKnown RBP2.87□□□□□ -1.95
RFC1-208ENST00000504849 FLNAP21333 2647 aaKnown RBP2.87□□□□□ -1.95
RFC1-208ENST00000504849 TRAV13-2A0A0B4J235 113 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 A6NDX4 124 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 TRBV12-3P01733 135 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 COX7CP15954 63 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 S100A7L2Q5SY68 101 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 LINC00308Q8TCZ7 52 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 DCANP1Q8TF63 244 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 CLEC2BQ92478 149 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 LINC00527Q9UJ94 153 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 VPREB3Q9UKI3 123 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 UBE2D4Q9Y2X8 147 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 COL6A5A8TX70 2615 aa2.87□□□□□ -1.95
RFC1-208ENST00000504849 TRAV12-2A0A075B6T6 113 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 A0A0J9YWU9 116 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 H0YGX0 51 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 H3BUX3 64 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 PSPHP1O15172 72 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 CRPP02741 224 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 BAALC-AS2P0C853 105 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 DEFB1P60022 68 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 NPC2P61916 151 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 REG3AQ06141 175 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 LY6EQ16553 131 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 SPINK13Q1W4C9 94 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 HIGD2BQ4VC39 106 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 SDIM1Q6ZPB5 146 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 DEFB104AQ8WTQ1 72 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 LINC00467Q9BRT7 94 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 CHCHD7Q9BUK0 85 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 BPESC1Q9GZL8 116 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 CSPG4Q6UVK1 2322 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 BSNQ9UPA5 3926 aa2.86□□□□□ -1.95
RFC1-208ENST00000504849 MALRD1Q5VYJ5 2156 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 KNTC1P50748 2209 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 CSMD2Q7Z408 3487 aa2.85□□□□□ -1.95
RFC1-208ENST00000504849 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.85□□□□□ -1.95
RFC1-208ENST00000504849 IGKV2-29A2NJV5 120 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms