RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 NDUFA6P56556 154 aa8.85□□□□□ -0.99
HOXC9-202ENST00000504557 SEC11AP67812 179 aa8.85□□□□□ -0.99
HOXC9-202ENST00000504557 TRBV30A0A0K0K1B3 111 aa8.84□□□□□ -0.99
HOXC9-202ENST00000504557 PMCHL1Q16048 86 aa8.84□□□□□ -0.99
HOXC9-202ENST00000504557 LINC01561Q8N1V8 128 aa8.84□□□□□ -0.99
HOXC9-202ENST00000504557 LINC01546A6NGU7 62 aa8.83□□□□□ -1
HOXC9-202ENST00000504557 FAM19A3Q7Z5A8 133 aa8.83□□□□□ -1
HOXC9-202ENST00000504557 Q8IZM0 81 aa8.83□□□□□ -1
HOXC9-202ENST00000504557 C18orf32Q8TCD1 76 aa8.83□□□□□ -1
HOXC9-202ENST00000504557 CST9LQ9H4G1 147 aa8.83□□□□□ -1
HOXC9-202ENST00000504557 SPINK8P0C7L1 97 aa8.82□□□□□ -1
HOXC9-202ENST00000504557 TLX1NBP0CAT3 122 aa8.82□□□□□ -1
HOXC9-202ENST00000504557 PSORS1C2Q9UIG4 136 aa8.82□□□□□ -1
HOXC9-202ENST00000504557 TINCRA0A1B0GVN0 87 aa8.81□□□□□ -1
HOXC9-202ENST00000504557 LINC01549A6NIU2 74 aa8.81□□□□□ -1
HOXC9-202ENST00000504557 NDUFC2-KCTD14E9PQ53 114 aa8.81□□□□□ -1
HOXC9-202ENST00000504557 PMVKQ15126 192 aa8.81□□□□□ -1
HOXC9-202ENST00000504557 C1orf137Q5JT78 98 aa8.81□□□□□ -1
HOXC9-202ENST00000504557 URB1-AS1Q96HZ7 61 aa8.81□□□□□ -1
HOXC9-202ENST00000504557 SMIM1B2RUZ4 78 aa8.8□□□□□ -1
HOXC9-202ENST00000504557 M0QXV9 152 aa8.8□□□□□ -1
HOXC9-202ENST00000504557 LINC00614P0C842 121 aa8.8□□□□□ -1
HOXC9-202ENST00000504557 C9orf129Q5T035 196 aaKnown RBP8.8□□□□□ -1
HOXC9-202ENST00000504557 MT1HL1P0DM35 61 aa8.79□□□□□ -1
HOXC9-202ENST00000504557 UBE2BP63146 152 aa8.79□□□□□ -1
HOXC9-202ENST00000504557 SPINK6Q6UWN8 80 aa8.79□□□□□ -1
HOXC9-202ENST00000504557 COX7B2Q8TF08 81 aa8.79□□□□□ -1
HOXC9-202ENST00000504557 XAGE1AQ9HD64 81 aa8.79□□□□□ -1
HOXC9-202ENST00000504557 A0A096LNJ9 63 aa8.78□□□□□ -1
HOXC9-202ENST00000504557 F8VRH5 84 aa8.78□□□□□ -1
HOXC9-202ENST00000504557 HBDP02042 147 aa8.78□□□□□ -1
HOXC9-202ENST00000504557 KRTAP11-1Q8IUC1 163 aa8.78□□□□□ -1
HOXC9-202ENST00000504557 CBLN2Q8IUK8 224 aa8.78□□□□□ -1
HOXC9-202ENST00000504557 RAB5BP61020 215 aa8.77□□□□□ -1.01
HOXC9-202ENST00000504557 PDZD11Q5EBL8 140 aa8.77□□□□□ -1.01
HOXC9-202ENST00000504557 SERTAD4-AS1Q5TG53 156 aa8.77□□□□□ -1.01
HOXC9-202ENST00000504557 REG3GQ6UW15 175 aa8.77□□□□□ -1.01
HOXC9-202ENST00000504557 KRTAP7-1Q8IUC3 87 aa8.77□□□□□ -1.01
HOXC9-202ENST00000504557 H3BRM9 83 aa8.76□□□□□ -1.01
HOXC9-202ENST00000504557 ODF1Q14990 250 aa8.76□□□□□ -1.01
HOXC9-202ENST00000504557 SLC7A5P1Q8MH63 180 aa8.76□□□□□ -1.01
HOXC9-202ENST00000504557 IGLV5-45A0A087WSX0 123 aa8.75□□□□□ -1.01
HOXC9-202ENST00000504557 CXCL5P42830 114 aa8.75□□□□□ -1.01
HOXC9-202ENST00000504557 SRSF9Q13242 221 aaKnown RBP eCLIP8.75□□□□□ -1.01
HOXC9-202ENST00000504557 YPEL4Q96NS1 127 aa8.75□□□□□ -1.01
HOXC9-202ENST00000504557 BAGE3Q86Y29 109 aa8.74□□□□□ -1.01
HOXC9-202ENST00000504557 LINC01600Q96MT4 127 aa8.74□□□□□ -1.01
HOXC9-202ENST00000504557 PLA2G2DQ9UNK4 145 aa8.74□□□□□ -1.01
HOXC9-202ENST00000504557 IGLV7-43P04211 117 aa8.73□□□□□ -1.01
HOXC9-202ENST00000504557 IGLC3P0DOY3 106 aa8.73□□□□□ -1.01
HOXC9-202ENST00000504557 ATP5LO75964 103 aa8.72□□□□□ -1.01
HOXC9-202ENST00000504557 ZNF22P17026 224 aaPredicted RBP8.72□□□□□ -1.01
HOXC9-202ENST00000504557 TMEM170BQ5T4T1 132 aa8.72□□□□□ -1.01
HOXC9-202ENST00000504557 C11orf86A6NJI1 115 aa8.71□□□□□ -1.02
HOXC9-202ENST00000504557 PFN2P35080 140 aa8.71□□□□□ -1.02
HOXC9-202ENST00000504557 C22orf24Q9Y442 160 aa8.71□□□□□ -1.02
HOXC9-202ENST00000504557 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
HOXC9-202ENST00000504557 CHTOPQ9Y3Y2 248 aaKnown RBP8.7□□□□□ -1.02
HOXC9-202ENST00000504557 GAGE10A6NGK3 116 aa8.69□□□□□ -1.02
HOXC9-202ENST00000504557 H0Y8G0 127 aa8.69□□□□□ -1.02
HOXC9-202ENST00000504557 TRGC2P03986 189 aa8.69□□□□□ -1.02
HOXC9-202ENST00000504557 FAM19A2Q8N3H0 131 aa8.69□□□□□ -1.02
HOXC9-202ENST00000504557 CHCHD1Q96BP2 118 aaKnown RBP8.69□□□□□ -1.02
HOXC9-202ENST00000504557 HSBP1O75506 76 aa8.68□□□□□ -1.02
HOXC9-202ENST00000504557 DIRC1Q969H9 104 aa8.68□□□□□ -1.02
HOXC9-202ENST00000504557 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
HOXC9-202ENST00000504557 RPL37AP8A6NKH3 93 aa8.67□□□□□ -1.02
HOXC9-202ENST00000504557 LBHQ53QV2 105 aaPredicted RBP8.67□□□□□ -1.02
HOXC9-202ENST00000504557 MRPL55Q7Z7F7 128 aaKnown RBP8.67□□□□□ -1.02
HOXC9-202ENST00000504557 TNXBP22105 4242 aa8.67□□□□□ -1.02
HOXC9-202ENST00000504557 IGLV5-39A0A0G2JS06 123 aa8.66□□□□□ -1.02
HOXC9-202ENST00000504557 H0Y9J4 135 aa8.65□□□□□ -1.02
HOXC9-202ENST00000504557 KRTAP10-8P60410 259 aa8.65□□□□□ -1.02
HOXC9-202ENST00000504557 NKAPP1Q8N9T2 125 aa8.65□□□□□ -1.02
HOXC9-202ENST00000504557 SCO1O75880 301 aa8.64□□□□□ -1.03
HOXC9-202ENST00000504557 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
HOXC9-202ENST00000504557 LINC00167Q96N53 147 aa8.64□□□□□ -1.03
HOXC9-202ENST00000504557 ERG28Q9UKR5 140 aa8.64□□□□□ -1.03
HOXC9-202ENST00000504557 HMCN2Q8NDA2 5059 aa8.63□□□□□ -1.03
HOXC9-202ENST00000504557 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
HOXC9-202ENST00000504557 SERF1AO75920 110 aa8.63□□□□□ -1.03
HOXC9-202ENST00000504557 TP73-AS1Q9UF72 201 aa8.62□□□□□ -1.03
HOXC9-202ENST00000504557 TRAV12-1A0A0B4J245 112 aa8.61□□□□□ -1.03
HOXC9-202ENST00000504557 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
HOXC9-202ENST00000504557 NUPR1O60356 82 aa8.61□□□□□ -1.03
HOXC9-202ENST00000504557 FABP4P15090 132 aa8.61□□□□□ -1.03
HOXC9-202ENST00000504557 LINC00158P58513 81 aa8.61□□□□□ -1.03
HOXC9-202ENST00000504557 SND1-IT1Q9HBX3 110 aa8.61□□□□□ -1.03
HOXC9-202ENST00000504557 IGKV2-28A0A075B6P5 120 aa8.6□□□□□ -1.03
HOXC9-202ENST00000504557 IGKV2D-28P01615 120 aa8.6□□□□□ -1.03
HOXC9-202ENST00000504557 COLCA2A8K830 154 aa8.59□□□□□ -1.03
HOXC9-202ENST00000504557 ZNF861PO60384 105 aa8.59□□□□□ -1.03
HOXC9-202ENST00000504557 LEPROTL1O95214 131 aa8.59□□□□□ -1.03
HOXC9-202ENST00000504557 LINC00310P59036 64 aa8.59□□□□□ -1.03
HOXC9-202ENST00000504557 BCE1O60756 84 aa8.58□□□□□ -1.04
HOXC9-202ENST00000504557 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
HOXC9-202ENST00000504557 ATP6V1G1O75348 118 aa8.57□□□□□ -1.04
HOXC9-202ENST00000504557 UBE2AP49459 152 aa8.57□□□□□ -1.04
HOXC9-202ENST00000504557 COX17Q14061 63 aa8.57□□□□□ -1.04
HOXC9-202ENST00000504557 MEIG1Q5JSS6 88 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms