RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PHRF1Q9P1Y6 1649 aaKnown RBP2.71□□□□□ -1.98
NIPBL-204ENST00000504430 IGLV4-60A0A075B6I1 120 aa2.71□□□□□ -1.98
NIPBL-204ENST00000504430 IGKV2-28A0A075B6P5 120 aa2.71□□□□□ -1.98
NIPBL-204ENST00000504430 IGKV2D-28P01615 120 aa2.71□□□□□ -1.98
NIPBL-204ENST00000504430 SMIM4Q8WVI0 70 aa2.71□□□□□ -1.98
NIPBL-204ENST00000504430 GOLGA4Q13439 2230 aaKnown RBP2.71□□□□□ -1.98
NIPBL-204ENST00000504430 SHPRHQ149N8 1683 aa2.71□□□□□ -1.98
NIPBL-204ENST00000504430 KRTAP10-6P60371 365 aaPredicted RBP2.7□□□□□ -1.98
NIPBL-204ENST00000504430 KRTAP2-2Q9BYT5 123 aa2.7□□□□□ -1.98
NIPBL-204ENST00000504430 ATXN8Q156A1 80 aa2.7□□□□□ -1.98
NIPBL-204ENST00000504430 Q86TA4 180 aa2.7□□□□□ -1.98
NIPBL-204ENST00000504430 PIK3C2BO00750 1634 aa2.7□□□□□ -1.98
NIPBL-204ENST00000504430 NUP188Q5SRE5 1749 aa2.7□□□□□ -1.98
NIPBL-204ENST00000504430 SORL1Q92673 2214 aa2.7□□□□□ -1.98
NIPBL-204ENST00000504430 SPRR4Q96PI1 79 aa2.7□□□□□ -1.98
NIPBL-204ENST00000504430 PLAC8Q9NZF1 115 aa2.7□□□□□ -1.98
NIPBL-204ENST00000504430 KIAA0556O60303 1618 aa2.69□□□□□ -1.98
NIPBL-204ENST00000504430 VWDEQ8N2E2 1590 aa2.69□□□□□ -1.98
NIPBL-204ENST00000504430 FMN2Q9NZ56 1722 aa2.69□□□□□ -1.98
NIPBL-204ENST00000504430 COA5Q86WW8 74 aa2.69□□□□□ -1.98
NIPBL-204ENST00000504430 REV3LO60673 3130 aa2.69□□□□□ -1.98
NIPBL-204ENST00000504430 TIAM2Q8IVF5 1701 aa2.68□□□□□ -1.98
NIPBL-204ENST00000504430 IQGAP1P46940 1657 aa2.68□□□□□ -1.98
NIPBL-204ENST00000504430 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
NIPBL-204ENST00000504430 ANKRD36CQ5JPF3 1778 aa2.68□□□□□ -1.98
NIPBL-204ENST00000504430 TNCP24821 2201 aa2.67□□□□□ -1.98
NIPBL-204ENST00000504430 ALS2Q96Q42 1657 aa2.67□□□□□ -1.98
NIPBL-204ENST00000504430 MT3P25713 68 aa2.67□□□□□ -1.98
NIPBL-204ENST00000504430 DEFB132Q7Z7B7 95 aa2.67□□□□□ -1.98
NIPBL-204ENST00000504430 C4orf3Q8WVX3 66 aa2.67□□□□□ -1.98
NIPBL-204ENST00000504430 UQCR11O14957 56 aa2.66□□□□□ -1.98
NIPBL-204ENST00000504430 PRB2P02812 416 aaPredicted RBP2.66□□□□□ -1.98
NIPBL-204ENST00000504430 PARP4Q9UKK3 1724 aaKnown RBP2.66□□□□□ -1.98
NIPBL-204ENST00000504430 C10orf113Q5VZT2 155 aa2.66□□□□□ -1.98
NIPBL-204ENST00000504430 TMEM14CQ9P0S9 112 aa2.66□□□□□ -1.98
NIPBL-204ENST00000504430 CPS1P31327 1500 aa2.66□□□□□ -1.98
NIPBL-204ENST00000504430 TULP4Q9NRJ4 1543 aa2.66□□□□□ -1.98
NIPBL-204ENST00000504430 TRAV21A0A0B4J279 112 aa2.66□□□□□ -1.98
NIPBL-204ENST00000504430 ATP5EP2Q5VTU8 51 aa2.66□□□□□ -1.98
NIPBL-204ENST00000504430 ABRACLQ9P1F3 81 aa2.66□□□□□ -1.98
NIPBL-204ENST00000504430 NWD1Q149M9 1564 aa2.66□□□□□ -1.98
NIPBL-204ENST00000504430 PKD1L3Q7Z443 1732 aa2.65□□□□□ -1.98
NIPBL-204ENST00000504430 TRPM2O94759 1503 aa2.65□□□□□ -1.98
NIPBL-204ENST00000504430 PRR9Q5T870 116 aa2.65□□□□□ -1.98
NIPBL-204ENST00000504430 HCP5Q6MZN7 132 aa2.65□□□□□ -1.98
NIPBL-204ENST00000504430 LINC00322Q6ZN03 302 aaPredicted RBP2.65□□□□□ -1.98
NIPBL-204ENST00000504430 OBSCN-AS1Q96MR7 158 aa2.65□□□□□ -1.98
NIPBL-204ENST00000504430 FCER1GP30273 86 aa2.65□□□□□ -1.99
NIPBL-204ENST00000504430 WFDC9Q8NEX5 89 aa2.65□□□□□ -1.99
NIPBL-204ENST00000504430 LRRC37A3O60309 1634 aa2.65□□□□□ -1.99
NIPBL-204ENST00000504430 MGPP08493 103 aa2.65□□□□□ -1.99
NIPBL-204ENST00000504430 NMES1Q9C002 83 aa2.65□□□□□ -1.99
NIPBL-204ENST00000504430 TIMM8BQ9Y5J9 83 aaPredicted RBP2.65□□□□□ -1.99
NIPBL-204ENST00000504430 AHCTF1Q8WYP5 2266 aa2.64□□□□□ -1.99
NIPBL-204ENST00000504430 USP32Q8NFA0 1604 aa2.64□□□□□ -1.99
NIPBL-204ENST00000504430 H0Y9P7 68 aa2.64□□□□□ -1.99
NIPBL-204ENST00000504430 FXYD6P3P58550 94 aa2.64□□□□□ -1.99
NIPBL-204ENST00000504430 CCL19Q99731 98 aa2.64□□□□□ -1.99
NIPBL-204ENST00000504430 ATP7AQ04656 1500 aa2.64□□□□□ -1.99
NIPBL-204ENST00000504430 PLCH1Q4KWH8 1693 aa2.64□□□□□ -1.99
NIPBL-204ENST00000504430 LOC110117498A0A087WWA1 95 aa2.64□□□□□ -1.99
NIPBL-204ENST00000504430 RPS27LQ71UM5 84 aaKnown RBP2.64□□□□□ -1.99
NIPBL-204ENST00000504430 TXNDC17Q9BRA2 123 aa2.64□□□□□ -1.99
NIPBL-204ENST00000504430 URB1O60287 2271 aaKnown RBP2.64□□□□□ -1.99
NIPBL-204ENST00000504430 NREPQ16612 68 aa2.63□□□□□ -1.99
NIPBL-204ENST00000504430 COL14A1Q05707 1796 aaKnown RBP2.63□□□□□ -1.99
NIPBL-204ENST00000504430 BPTFQ12830 3046 aa2.63□□□□□ -1.99
NIPBL-204ENST00000504430 IGKV2-24A0A0C4DH68 120 aa2.63□□□□□ -1.99
NIPBL-204ENST00000504430 CMC2Q9NRP2 79 aa2.63□□□□□ -1.99
NIPBL-204ENST00000504430 ENHOQ6UWT2 76 aa2.62□□□□□ -1.99
NIPBL-204ENST00000504430 LINC00846Q9NV44 126 aa2.62□□□□□ -1.99
NIPBL-204ENST00000504430 LINC00959A0A1B0GUT2 108 aa2.62□□□□□ -1.99
NIPBL-204ENST00000504430 A0A1B0GUT8 65 aa2.62□□□□□ -1.99
NIPBL-204ENST00000504430 ACYP2P14621 99 aa2.62□□□□□ -1.99
NIPBL-204ENST00000504430 SNRPGP62308 76 aaKnown RBP2.62□□□□□ -1.99
NIPBL-204ENST00000504430 SPINK4O60575 86 aa2.61□□□□□ -1.99
NIPBL-204ENST00000504430 FLG2Q5D862 2391 aaPredicted RBP2.61□□□□□ -1.99
NIPBL-204ENST00000504430 BAHCC1Q9P281 2608 aa2.61□□□□□ -1.99
NIPBL-204ENST00000504430 SPATA8Q6RVD6 105 aa2.61□□□□□ -1.99
NIPBL-204ENST00000504430 KRTAP9-8Q9BYQ0 159 aa2.61□□□□□ -1.99
NIPBL-204ENST00000504430 NFAT5O94916 1531 aa2.6□□□□□ -1.99
NIPBL-204ENST00000504430 TECTAO75443 2155 aa2.6□□□□□ -1.99
NIPBL-204ENST00000504430 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
NIPBL-204ENST00000504430 TMEM263Q8WUH6 116 aaKnown RBP2.59□□□□□ -1.99
NIPBL-204ENST00000504430 NOTCH3Q9UM47 2321 aa2.59□□□□□ -1.99
NIPBL-204ENST00000504430 DEFB112Q30KQ8 113 aa2.59□□□□□ -1.99
NIPBL-204ENST00000504430 ZCCHC13Q8WW36 166 aaKnown RBP2.59□□□□□ -1.99
NIPBL-204ENST00000504430 ADGRB2O60241 1585 aa2.59□□□□□ -2
NIPBL-204ENST00000504430 PRB1P04280 392 aa2.59□□□□□ -2
NIPBL-204ENST00000504430 KRTAP10-12P60413 245 aa2.59□□□□□ -2
NIPBL-204ENST00000504430 PAPPA2Q9BXP8 1791 aa2.59□□□□□ -2
NIPBL-204ENST00000504430 C5P01031 1676 aa2.58□□□□□ -2
NIPBL-204ENST00000504430 EIF2AK4Q9P2K8 1649 aaKnown RBP2.58□□□□□ -2
NIPBL-204ENST00000504430 BCORQ6W2J9 1755 aa2.58□□□□□ -2
NIPBL-204ENST00000504430 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.58□□□□□ -22e-7■■■■■ 27.8
NIPBL-204ENST00000504430 INE1O15225 51 aa2.58□□□□□ -2
NIPBL-204ENST00000504430 NAV3Q8IVL0 2385 aa2.58□□□□□ -2
NIPBL-204ENST00000504430 RICTORQ6R327 1708 aa2.58□□□□□ -2
NIPBL-204ENST00000504430 KRTAP1-5Q9BYS1 174 aa2.58□□□□□ -2
NIPBL-204ENST00000504430 JMJD1CQ15652 2540 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms