RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 LYPD5Q6UWN5 251 aa6.72□□□□□ -1.33
COL1A1-210ENST00000504289 C5orf38Q86SI9 138 aa6.72□□□□□ -1.33
COL1A1-210ENST00000504289 LINC00269Q8N2A0 174 aa6.72□□□□□ -1.33
COL1A1-210ENST00000504289 CHCHD10Q8WYQ3 142 aaPredicted RBP6.72□□□□□ -1.33
COL1A1-210ENST00000504289 KLK5Q9Y337 293 aaPredicted RBP6.72□□□□□ -1.33
COL1A1-210ENST00000504289 HTN3P15516 51 aa6.71□□□□□ -1.34
COL1A1-210ENST00000504289 XCL1P47992 114 aa6.71□□□□□ -1.34
COL1A1-210ENST00000504289 WFDC2Q14508 124 aa6.71□□□□□ -1.34
COL1A1-210ENST00000504289 SPATA25Q9BR10 227 aa6.71□□□□□ -1.34
COL1A1-210ENST00000504289 TOMM7Q9P0U1 55 aa6.71□□□□□ -1.34
COL1A1-210ENST00000504289 TRIAP1O43715 76 aa6.7□□□□□ -1.34
COL1A1-210ENST00000504289 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
COL1A1-210ENST00000504289 KPRPQ5T749 579 aaPredicted RBP6.7□□□□□ -1.34
COL1A1-210ENST00000504289 MTURNQ8N3F0 131 aa6.7□□□□□ -1.34
COL1A1-210ENST00000504289 MIR7-3HGQ8N6C7 128 aa6.7□□□□□ -1.34
COL1A1-210ENST00000504289 DNAH3Q8TD57 4116 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 A0A1B0GV72 72 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 MALP21145 153 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 LINC00158P58513 81 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 CKS1BP61024 79 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 FOXI1Q12951 378 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 KIAA0087Q14695 138 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 CFAP161Q6P656 301 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 SOSTDC1Q6X4U4 206 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 DAND5Q8N907 189 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 C11orf45Q8TAV5 145 aa6.69□□□□□ -1.34
COL1A1-210ENST00000504289 H7C2G1 150 aa6.68□□□□□ -1.34
COL1A1-210ENST00000504289 ETDBQ3ZM63 59 aa6.68□□□□□ -1.34
COL1A1-210ENST00000504289 LINC01620Q4KN68 170 aa6.68□□□□□ -1.34
COL1A1-210ENST00000504289 TEN1Q86WV5 123 aa6.68□□□□□ -1.34
COL1A1-210ENST00000504289 C15orf53Q8NAA6 179 aa6.68□□□□□ -1.34
COL1A1-210ENST00000504289 TM2D3Q9BRN9 247 aa6.68□□□□□ -1.34
COL1A1-210ENST00000504289 PKD1L1Q8TDX9 2849 aa6.68□□□□□ -1.34
COL1A1-210ENST00000504289 TRBV10-2A0A0K0K1G8 114 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 F8WDY8 70 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 H3BT86 120 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 LST1O00453 97 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 SLC25A20O43772 301 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 NDUFC2O95298 119 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 CRPP02741 224 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 RPL28P46779 137 aaKnown RBP6.67□□□□□ -1.34
COL1A1-210ENST00000504289 SMCPP49901 116 aaPredicted RBP6.67□□□□□ -1.34
COL1A1-210ENST00000504289 NPC2P61916 151 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 Q6ZTC4 211 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 CARD19Q96LW7 228 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 SND1-IT1Q9HBX3 110 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 RETNQ9HD89 108 aa6.67□□□□□ -1.34
COL1A1-210ENST00000504289 CMYA5Q8N3K9 4069 aa6.66□□□□□ -1.34
COL1A1-210ENST00000504289 DEFB131BA0A096LNP1 70 aa6.66□□□□□ -1.34
COL1A1-210ENST00000504289 GVQW2A0A096LPI5 108 aaPredicted RBP6.66□□□□□ -1.34
COL1A1-210ENST00000504289 TRAV10A0A0B4J240 114 aa6.66□□□□□ -1.34
COL1A1-210ENST00000504289 A0A0J9YWU9 116 aa6.66□□□□□ -1.34
COL1A1-210ENST00000504289 CCL18P55774 89 aa6.66□□□□□ -1.34
COL1A1-210ENST00000504289 PPDPFLQ8WWR9 84 aa6.66□□□□□ -1.34
COL1A1-210ENST00000504289 SIGMAR1Q99720 223 aa6.66□□□□□ -1.34
COL1A1-210ENST00000504289 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
COL1A1-210ENST00000504289 GAGE12HA6NDE8 117 aa6.65□□□□□ -1.34
COL1A1-210ENST00000504289 C9JAW5 83 aa6.65□□□□□ -1.34
COL1A1-210ENST00000504289 H0YGX0 51 aa6.65□□□□□ -1.34
COL1A1-210ENST00000504289 TRACP01848 142 aa6.65□□□□□ -1.34
COL1A1-210ENST00000504289 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.34
COL1A1-210ENST00000504289 CLPSL2Q6UWE3 100 aa6.65□□□□□ -1.34
COL1A1-210ENST00000504289 ENHOQ6UWT2 76 aa6.65□□□□□ -1.34
COL1A1-210ENST00000504289 ANKRD29Q8N6D5 301 aa6.65□□□□□ -1.34
COL1A1-210ENST00000504289 KLK12Q9UKR0 248 aa6.65□□□□□ -1.34
COL1A1-210ENST00000504289 PFN2P35080 140 aa6.63□□□□□ -1.35
COL1A1-210ENST00000504289 NOTCH1P46531 2555 aa6.62□□□□□ -1.35
COL1A1-210ENST00000504289 IGLV10-54A0A075B6I4 117 aa6.62□□□□□ -1.35
COL1A1-210ENST00000504289 IGKV2-28A0A075B6P5 120 aa6.62□□□□□ -1.35
COL1A1-210ENST00000504289 K7EIL1 84 aa6.62□□□□□ -1.35
COL1A1-210ENST00000504289 IGKV2D-28P01615 120 aa6.62□□□□□ -1.35
COL1A1-210ENST00000504289 DNAH10OSP0CZ25 163 aa6.62□□□□□ -1.35
COL1A1-210ENST00000504289 NANOS2P60321 138 aaKnown RBP6.62□□□□□ -1.35
COL1A1-210ENST00000504289 SPAG11BQ08648 103 aa6.62□□□□□ -1.35
COL1A1-210ENST00000504289 ESRGQ1W209 222 aa6.62□□□□□ -1.35
COL1A1-210ENST00000504289 ANK2Q01484 3957 aa6.61□□□□□ -1.35
COL1A1-210ENST00000504289 C2orf82Q6UX34 121 aa6.61□□□□□ -1.35
COL1A1-210ENST00000504289 WFDC10BQ8IUB3 73 aa6.61□□□□□ -1.35
COL1A1-210ENST00000504289 Q8N3U1 123 aa6.61□□□□□ -1.35
COL1A1-210ENST00000504289 LINC00337Q8N6G1 96 aa6.61□□□□□ -1.35
COL1A1-210ENST00000504289 NTN5Q8WTR8 489 aaPredicted RBP6.61□□□□□ -1.35
COL1A1-210ENST00000504289 UBE2WQ96B02 151 aa6.61□□□□□ -1.35
COL1A1-210ENST00000504289 C2orf48Q96LS8 159 aa6.61□□□□□ -1.35
COL1A1-210ENST00000504289 A0A1B0GX51 115 aa6.6□□□□□ -1.35
COL1A1-210ENST00000504289 KRTAP26-1Q6PEX3 210 aa6.6□□□□□ -1.35
COL1A1-210ENST00000504289 TMEM126AQ9H061 195 aa6.6□□□□□ -1.35
COL1A1-210ENST00000504289 DEFB121Q5J5C9 76 aa6.59□□□□□ -1.35
COL1A1-210ENST00000504289 CLEC2BQ92478 149 aa6.59□□□□□ -1.35
COL1A1-210ENST00000504289 SMIM11BQ8TCY0 68 aa6.58□□□□□ -1.36
COL1A1-210ENST00000504289 C1orf43Q9BWL3 253 aa6.58□□□□□ -1.36
COL1A1-210ENST00000504289 TENM3Q9P273 2699 aa6.58□□□□□ -1.36
COL1A1-210ENST00000504289 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
COL1A1-210ENST00000504289 UNQ6190/PRO20217Q6UXQ8 127 aa6.57□□□□□ -1.36
COL1A1-210ENST00000504289 RMI2Q96E14 147 aa6.57□□□□□ -1.36
COL1A1-210ENST00000504289 UPK3BQ9BT76 320 aa6.57□□□□□ -1.36
COL1A1-210ENST00000504289 MGAM2Q2M2H8 2515 aa6.57□□□□□ -1.36
COL1A1-210ENST00000504289 SNCGO76070 127 aa6.56□□□□□ -1.36
COL1A1-210ENST00000504289 OR13C6PQ8NH95 151 aa6.56□□□□□ -1.36
COL1A1-210ENST00000504289 FAM240AA0A1B0GVK7 77 aa6.55□□□□□ -1.36
COL1A1-210ENST00000504289 DNAL4O96015 105 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms