RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 A0A087WZ39 114 aa12.97□□□□□ -0.33
SCARB2-203ENST00000502908 LINC00959A0A1B0GUT2 108 aa12.97□□□□□ -0.33
SCARB2-203ENST00000502908 VWFP04275 2813 aa12.96□□□□□ -0.33
SCARB2-203ENST00000502908 C6orf226Q5I0X4 101 aa12.96□□□□□ -0.33
SCARB2-203ENST00000502908 GYPEP15421 78 aa12.95□□□□□ -0.34
SCARB2-203ENST00000502908 PRR3P79522 188 aaKnown RBP12.95□□□□□ -0.34
SCARB2-203ENST00000502908 SMIM20Q8N5G0 67 aa12.95□□□□□ -0.34
SCARB2-203ENST00000502908 PDZD2O15018 2839 aa12.95□□□□□ -0.34
SCARB2-203ENST00000502908 IBA57-AS1B1ANH7 110 aa12.94□□□□□ -0.34
SCARB2-203ENST00000502908 NCR3O14931 201 aa12.94□□□□□ -0.34
SCARB2-203ENST00000502908 INAFM2P0DMQ5 153 aa12.94□□□□□ -0.34
SCARB2-203ENST00000502908 SDIM1Q6ZPB5 146 aa12.92□□□□□ -0.34
SCARB2-203ENST00000502908 Q8N3U1 123 aa12.92□□□□□ -0.34
SCARB2-203ENST00000502908 IMUPQ9GZP8 106 aa12.91□□□□□ -0.34
SCARB2-203ENST00000502908 PPDPFQ9H3Y8 114 aa12.9□□□□□ -0.34
SCARB2-203ENST00000502908 DEFB4AO15263 64 aa12.9□□□□□ -0.34
SCARB2-203ENST00000502908 CMC4P56277 68 aaPredicted RBP12.9□□□□□ -0.34
SCARB2-203ENST00000502908 IGLV10-54A0A075B6I4 117 aa12.89□□□□□ -0.35
SCARB2-203ENST00000502908 IGKV3D-7A0A0C4DH55 119 aa12.89□□□□□ -0.35
SCARB2-203ENST00000502908 KRTAP1-1Q07627 177 aa12.88□□□□□ -0.35
SCARB2-203ENST00000502908 H0YGX0 51 aa12.87□□□□□ -0.35
SCARB2-203ENST00000502908 LINC00846Q9NV44 126 aa12.87□□□□□ -0.35
SCARB2-203ENST00000502908 C9orf116Q5BN46 136 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-203ENST00000502908 RNASE1P07998 156 aaKnown RBP12.86□□□□□ -0.35
SCARB2-203ENST00000502908 SS18Q15532 418 aa12.86□□□□□ -0.35
SCARB2-203ENST00000502908 LINC00269Q8N2A0 174 aa12.85□□□□□ -0.35
SCARB2-203ENST00000502908 FAM110AQ9BQ89 295 aa12.85□□□□□ -0.35
SCARB2-203ENST00000502908 C9orf153Q5TBE3 101 aa12.84□□□□□ -0.35
SCARB2-203ENST00000502908 LINC00482Q8N8I6 264 aa12.84□□□□□ -0.35
SCARB2-203ENST00000502908 SPATA3Q8NHX4 192 aa12.84□□□□□ -0.35
SCARB2-203ENST00000502908 A0A087WVE0 104 aa12.83□□□□□ -0.35
SCARB2-203ENST00000502908 KLK5Q9Y337 293 aaPredicted RBP12.83□□□□□ -0.35
SCARB2-203ENST00000502908 HIVEP2P31629 2446 aa12.83□□□□□ -0.36
SCARB2-203ENST00000502908 C16orf95Q9H693 158 aa12.83□□□□□ -0.36
SCARB2-203ENST00000502908 KRTAP10-3P60369 221 aa12.82□□□□□ -0.36
SCARB2-203ENST00000502908 SVIPQ8NHG7 77 aa12.82□□□□□ -0.36
SCARB2-203ENST00000502908 SMR3AQ99954 134 aa12.82□□□□□ -0.36
SCARB2-203ENST00000502908 X6R8D5 127 aa12.82□□□□□ -0.36
SCARB2-203ENST00000502908 NANOS2P60321 138 aaKnown RBP12.81□□□□□ -0.36
SCARB2-203ENST00000502908 Q8IZM0 81 aa12.81□□□□□ -0.36
SCARB2-203ENST00000502908 C3orf22Q8N5N4 141 aa12.81□□□□□ -0.36
SCARB2-203ENST00000502908 CXCL5P42830 114 aa12.81□□□□□ -0.36
SCARB2-203ENST00000502908 KIR2DL5BQ8NHK3 375 aa12.81□□□□□ -0.36
SCARB2-203ENST00000502908 LY6G6DO95868 133 aa12.8□□□□□ -0.36
SCARB2-203ENST00000502908 OBSCN-AS1Q96MR7 158 aa12.8□□□□□ -0.36
SCARB2-203ENST00000502908 ORMDL1Q9P0S3 153 aa12.8□□□□□ -0.36
SCARB2-203ENST00000502908 Q8NDZ9 215 aa12.79□□□□□ -0.36
SCARB2-203ENST00000502908 LINC00526Q96FQ7 95 aa12.79□□□□□ -0.36
SCARB2-203ENST00000502908 PRO0255Q9UI72 69 aa12.79□□□□□ -0.36
SCARB2-203ENST00000502908 A0A1B0GUV1 79 aa12.78□□□□□ -0.36
SCARB2-203ENST00000502908 ANGP03950 147 aaKnown RBP12.78□□□□□ -0.36
SCARB2-203ENST00000502908 DEFB135Q30KP9 77 aa12.77□□□□□ -0.36
SCARB2-203ENST00000502908 LINC00612Q8N6U2 182 aa12.77□□□□□ -0.36
SCARB2-203ENST00000502908 CHCHD10Q8WYQ3 142 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-203ENST00000502908 UQCRQO14949 82 aa12.76□□□□□ -0.37
SCARB2-203ENST00000502908 KIAA0087Q14695 138 aa12.76□□□□□ -0.37
SCARB2-203ENST00000502908 FASNP49327 2511 aaKnown RBP12.76□□□□□ -0.37
SCARB2-203ENST00000502908 TENM1Q9UKZ4 2725 aa12.76□□□□□ -0.37
SCARB2-203ENST00000502908 CFAP161Q6P656 301 aa12.76□□□□□ -0.37
SCARB2-203ENST00000502908 HELZ2Q9BYK8 2649 aaKnown RBP12.76□□□□□ -0.37
SCARB2-203ENST00000502908 C6orf223Q8N319 242 aa12.75□□□□□ -0.37
SCARB2-203ENST00000502908 Q8N814 137 aa12.75□□□□□ -0.37
SCARB2-203ENST00000502908 WFDC9Q8NEX5 89 aa12.75□□□□□ -0.37
SCARB2-203ENST00000502908 C2orf48Q96LS8 159 aa12.75□□□□□ -0.37
SCARB2-203ENST00000502908 CYSTM1Q9H1C7 97 aa12.74□□□□□ -0.37
SCARB2-203ENST00000502908 REG3AQ06141 175 aa12.74□□□□□ -0.37
SCARB2-203ENST00000502908 HILS1P60008 231 aa12.73□□□□□ -0.37
SCARB2-203ENST00000502908 HIST1H4AP62805 103 aaKnown RBP12.73□□□□□ -0.37
SCARB2-203ENST00000502908 C6orf99Q4VX62 202 aa12.73□□□□□ -0.37
SCARB2-203ENST00000502908 TMEM126AQ9H061 195 aa12.73□□□□□ -0.37
SCARB2-203ENST00000502908 TRRAPQ9Y4A5 3859 aa12.73□□□□□ -0.37
SCARB2-203ENST00000502908 COX7CP15954 63 aa12.73□□□□□ -0.37
SCARB2-203ENST00000502908 CD164L2Q6UWJ8 174 aa12.73□□□□□ -0.37
SCARB2-203ENST00000502908 C10orf25Q5T742 122 aa12.72□□□□□ -0.37
SCARB2-203ENST00000502908 UNC79Q9P2D8 2635 aa12.72□□□□□ -0.37
SCARB2-203ENST00000502908 A0A1B0GX51 115 aa12.72□□□□□ -0.37
SCARB2-203ENST00000502908 HTN3P15516 51 aa12.72□□□□□ -0.37
SCARB2-203ENST00000502908 LINC01561Q8N1V8 128 aa12.72□□□□□ -0.37
SCARB2-203ENST00000502908 hADV29S1A0JD25 119 aa12.71□□□□□ -0.37
SCARB2-203ENST00000502908 Q6JHZ5 121 aa12.71□□□□□ -0.37
SCARB2-203ENST00000502908 CELA1Q9UNI1 258 aa12.7□□□□□ -0.38
SCARB2-203ENST00000502908 ATOX1O00244 68 aa12.7□□□□□ -0.38
SCARB2-203ENST00000502908 CCKP06307 115 aa12.7□□□□□ -0.38
SCARB2-203ENST00000502908 RPL18AQ02543 176 aaKnown RBP12.7□□□□□ -0.38
SCARB2-203ENST00000502908 UNQ6190/PRO20217Q6UXQ8 127 aa12.7□□□□□ -0.38
SCARB2-203ENST00000502908 NOTCH2Q04721 2471 aa12.69□□□□□ -0.38
SCARB2-203ENST00000502908 S100A7L2Q5SY68 101 aa12.68□□□□□ -0.38
SCARB2-203ENST00000502908 IGHV4-28A0A0C4DH34 117 aa12.67□□□□□ -0.38
SCARB2-203ENST00000502908 OTOGQ6ZRI0 2925 aa12.67□□□□□ -0.38
SCARB2-203ENST00000502908 LOC107984640A0A0U1RRK4 108 aa12.67□□□□□ -0.38
SCARB2-203ENST00000502908 LINC00167Q96N53 147 aa12.67□□□□□ -0.38
SCARB2-203ENST00000502908 DAD1P61803 113 aa12.66□□□□□ -0.38
SCARB2-203ENST00000502908 USP17L23D6RBM5 183 aa12.65□□□□□ -0.39
SCARB2-203ENST00000502908 TMEM256-PLSCR3K7ERE1 68 aa12.65□□□□□ -0.39
SCARB2-203ENST00000502908 NDUFC2O95298 119 aa12.65□□□□□ -0.39
SCARB2-203ENST00000502908 HIVEP1P15822 2718 aa12.64□□□□□ -0.39
SCARB2-203ENST00000502908 COX17Q14061 63 aa12.64□□□□□ -0.39
SCARB2-203ENST00000502908 HECTD1Q9ULT8 2610 aa12.64□□□□□ -0.39
SCARB2-203ENST00000502908 SMIM9A6NGZ8 99 aa12.64□□□□□ -0.39
SCARB2-203ENST00000502908 SPAG11BQ08648 103 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms