RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 TRGV4A0A0C4DH28 118 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 A0A1W2PPM0 123 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 J3QQQ9 107 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 P0DMU3 169 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 FAM231AP0DMU4 169 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 FAM231CP0DMU5 169 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 TCTAP57738 103 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 CIRBPQ14011 172 aaKnown RBP3.34□□□□□ -1.87
NEDD4-203ENST00000502612 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 AMMECR1LQ6DCA0 310 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 NOP10Q9NPE3 64 aaKnown RBP3.34□□□□□ -1.87
NEDD4-203ENST00000502612 NHP2Q9NX24 153 aaKnown RBP3.34□□□□□ -1.87
NEDD4-203ENST00000502612 TP73-AS1Q9UF72 201 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 UBE2D4Q9Y2X8 147 aa3.34□□□□□ -1.87
NEDD4-203ENST00000502612 CFAP46Q8IYW2 2715 aa3.33□□□□□ -1.88
NEDD4-203ENST00000502612 IGHV1-58A0A0C4DH39 117 aa3.33□□□□□ -1.88
NEDD4-203ENST00000502612 H3BUT2 72 aa3.33□□□□□ -1.88
NEDD4-203ENST00000502612 K7EP34 96 aa3.33□□□□□ -1.88
NEDD4-203ENST00000502612 K7ERU9 68 aa3.33□□□□□ -1.88
NEDD4-203ENST00000502612 PSPHP1O15172 72 aa3.33□□□□□ -1.88
NEDD4-203ENST00000502612 RPL18AQ02543 176 aaKnown RBP3.33□□□□□ -1.88
NEDD4-203ENST00000502612 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
NEDD4-203ENST00000502612 SFTA2Q6UW10 78 aa3.33□□□□□ -1.88
NEDD4-203ENST00000502612 SLC25A29Q8N8R3 303 aa3.33□□□□□ -1.88
NEDD4-203ENST00000502612 SPCS1Q9Y6A9 102 aa3.33□□□□□ -1.88
NEDD4-203ENST00000502612 DOPEY2Q9Y3R5 2298 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 AKAP6Q13023 2319 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 USP9XQ93008 2570 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-203ENST00000502612 BAHCC1Q9P281 2608 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 TRBV20-1A0A075B6N2 111 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 J3QR89 54 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 K7EP13 123 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 CCL25O15444 150 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 TIMM17BO60830 172 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 IFITM1P13164 125 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 ZNF22P17026 224 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-203ENST00000502612 FXYD2P54710 66 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 UBE2D3P61077 147 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 UBE2D2P62837 147 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 C12orf74Q32Q52 190 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 FAM19A3Q7Z5A8 133 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 RAB37Q96AX2 223 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 ABCA1O95477 2261 aa3.32□□□□□ -1.88
NEDD4-203ENST00000502612 ANKRD17O75179 2603 aaKnown RBP3.31□□□□□ -1.88
NEDD4-203ENST00000502612 MYO18BQ8IUG5 2567 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 NAV2Q8IVL1 2488 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-203ENST00000502612 A0A0J9YY99 117 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 IGKV2-29A2NJV5 120 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-203ENST00000502612 F8W1H4 67 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 IGHV3-30-3P0DP02 117 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 MIFP14174 115 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 UBE2D1P51668 147 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 EMP1P54849 157 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 Q6ZTI0 123 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
NEDD4-203ENST00000502612 SMR3AQ99954 134 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 TTTY13Q9BZ97 58 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 DCHS2Q6V1P9 2916 aa3.31□□□□□ -1.88
NEDD4-203ENST00000502612 A0A0B4J2C4 111 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 IGLL5B9A064 214 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 COX6CP09669 75 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 KPRPQ5T749 579 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-203ENST00000502612 ZFAND6Q6FIF0 208 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 PP632Q6XCG6 107 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 Q6ZUT4 128 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 WFDC9Q8NEX5 89 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 SPANXDQ9BXN6 97 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 SPANXCQ9NY87 97 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 PRO1854Q9UHT4 67 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 NDUFA12Q9UI09 145 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 PRO0255Q9UI72 69 aa3.3□□□□□ -1.88
NEDD4-203ENST00000502612 TRBV6-8A0A0A6YYG3 113 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 IGHV6-1A0A0B4J1U7 121 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 APOMO95445 188 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 IGHV3-30P01768 117 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 SPART-AS1P0CW21 52 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 IGHV3-30-5P0DP03 117 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 DEFB130BP0DP73 79 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 DEFB130AP0DP74 79 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 C10orf126Q8N4M7 172 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 ATP6V0E2Q8NHE4 81 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 DEFB104AQ8WTQ1 72 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 CDC42SE2Q9NRR3 84 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 ERG28Q9UKR5 140 aa3.29□□□□□ -1.88
NEDD4-203ENST00000502612 MED13LQ71F56 2210 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 IGHV3-64A0A075B6Q5 118 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 C16orf90A8MZG2 172 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 NDUFA1O15239 70 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 PRM2P04554 102 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 ATP5G1P05496 136 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 SCGB1C2P0DMR2 95 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 PSMB2P49721 201 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 DAD1P61803 113 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 RBX1P62877 108 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 SS18Q15532 418 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 MIAQ16674 131 aa3.28□□□□□ -1.88
NEDD4-203ENST00000502612 SBSPONQ8IVN8 264 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms