RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 GAGE2EQ4V326 116 aa9.96□□□□□ -0.82
NR1H3-227ENST00000498548 GNB1LQ9BYB4 327 aa9.96□□□□□ -0.82
NR1H3-227ENST00000498548 GAGE2DQ9UEU5 116 aa9.96□□□□□ -0.82
NR1H3-227ENST00000498548 TRAPPC1Q9Y5R8 145 aa9.96□□□□□ -0.82
NR1H3-227ENST00000498548 NDUFA6P56556 154 aa9.95□□□□□ -0.82
NR1H3-227ENST00000498548 FABP9Q0Z7S8 132 aa9.95□□□□□ -0.82
NR1H3-227ENST00000498548 SRSF9Q13242 221 aaKnown RBP eCLIP9.95□□□□□ -0.82
NR1H3-227ENST00000498548 COA6Q5JTJ3 125 aaKnown RBP9.95□□□□□ -0.82
NR1H3-227ENST00000498548 TOMM6Q96B49 74 aa9.95□□□□□ -0.82
NR1H3-227ENST00000498548 TLX1NBP0CAT3 122 aa9.94□□□□□ -0.82
NR1H3-227ENST00000498548 SPINK6Q6UWN8 80 aa9.94□□□□□ -0.82
NR1H3-227ENST00000498548 ALKBH7Q9BT30 221 aaPredicted RBP9.94□□□□□ -0.82
NR1H3-227ENST00000498548 TOMM7Q9P0U1 55 aa9.94□□□□□ -0.82
NR1H3-227ENST00000498548 PSORS1C2Q9UIG4 136 aa9.94□□□□□ -0.82
NR1H3-227ENST00000498548 PLA2G2DQ9UNK4 145 aa9.94□□□□□ -0.82
NR1H3-227ENST00000498548 MT-ND6P03923 174 aa9.93□□□□□ -0.82
NR1H3-227ENST00000498548 ODF1Q14990 250 aa9.93□□□□□ -0.82
NR1H3-227ENST00000498548 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
NR1H3-227ENST00000498548 LINC01561Q8N1V8 128 aa9.93□□□□□ -0.82
NR1H3-227ENST00000498548 HMCN2Q8NDA2 5059 aa9.92□□□□□ -0.82
NR1H3-227ENST00000498548 NPSP0C0P6 89 aa9.92□□□□□ -0.82
NR1H3-227ENST00000498548 FAM19A3Q7Z5A8 133 aa9.92□□□□□ -0.82
NR1H3-227ENST00000498548 KRTAP11-1Q8IUC1 163 aa9.92□□□□□ -0.82
NR1H3-227ENST00000498548 LINC01600Q96MT4 127 aa9.92□□□□□ -0.82
NR1H3-227ENST00000498548 SCGB3A1Q96QR1 104 aa9.92□□□□□ -0.82
NR1H3-227ENST00000498548 TIMM17AQ99595 171 aa9.92□□□□□ -0.82
NR1H3-227ENST00000498548 MRPL18Q9H0U6 180 aaKnown RBP9.92□□□□□ -0.82
NR1H3-227ENST00000498548 PRSS2P07478 247 aa9.91□□□□□ -0.82
NR1H3-227ENST00000498548 G0S2P27469 103 aa9.91□□□□□ -0.82
NR1H3-227ENST00000498548 C1orf137Q5JT78 98 aa9.91□□□□□ -0.82
NR1H3-227ENST00000498548 KRTAP7-1Q8IUC3 87 aa9.91□□□□□ -0.82
NR1H3-227ENST00000498548 PACRGQ96M98 296 aaPredicted RBP9.91□□□□□ -0.82
NR1H3-227ENST00000498548 CDKN2A-AS1Q9UH64 79 aa9.91□□□□□ -0.82
NR1H3-227ENST00000498548 TRBV30A0A0K0K1B3 111 aa9.9□□□□□ -0.82
NR1H3-227ENST00000498548 C6orf226Q5I0X4 101 aa9.9□□□□□ -0.82
NR1H3-227ENST00000498548 ERASQ7Z444 233 aa9.9□□□□□ -0.82
NR1H3-227ENST00000498548 HIST3H2BBQ8N257 126 aa9.9□□□□□ -0.82
NR1H3-227ENST00000498548 KRTAP3-3Q9BYR6 98 aa9.9□□□□□ -0.82
NR1H3-227ENST00000498548 KRTAP3-2Q9BYR7 98 aa9.9□□□□□ -0.82
NR1H3-227ENST00000498548 GEMIN7Q9H840 131 aaKnown RBP9.9□□□□□ -0.82
NR1H3-227ENST00000498548 HERVK_113P63121 156 aa9.89□□□□□ -0.83
NR1H3-227ENST00000498548 PAPPA-AS1Q5QFB9 102 aa9.89□□□□□ -0.83
NR1H3-227ENST00000498548 LINC01546A6NGU7 62 aa9.88□□□□□ -0.83
NR1H3-227ENST00000498548 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
NR1H3-227ENST00000498548 CKS1BP61024 79 aa9.88□□□□□ -0.83
NR1H3-227ENST00000498548 C9orf129Q5T035 196 aaKnown RBP9.88□□□□□ -0.83
NR1H3-227ENST00000498548 REG3GQ6UW15 175 aa9.88□□□□□ -0.83
NR1H3-227ENST00000498548 LINC00469Q8N7U9 141 aa9.88□□□□□ -0.83
NR1H3-227ENST00000498548 SEC11AP67812 179 aa9.87□□□□□ -0.83
NR1H3-227ENST00000498548 FA2HQ7L5A8 372 aa9.87□□□□□ -0.83
NR1H3-227ENST00000498548 Q8IZM0 81 aa9.87□□□□□ -0.83
NR1H3-227ENST00000498548 LINC00518Q8N0U6 118 aa9.87□□□□□ -0.83
NR1H3-227ENST00000498548 AKR1D1P51857 326 aa9.86□□□□□ -0.83
NR1H3-227ENST00000498548 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
NR1H3-227ENST00000498548 M0QXV9 152 aa9.85□□□□□ -0.83
NR1H3-227ENST00000498548 IGLV7-43P04211 117 aa9.84□□□□□ -0.83
NR1H3-227ENST00000498548 CST9LQ9H4G1 147 aa9.84□□□□□ -0.83
NR1H3-227ENST00000498548 TINCRA0A1B0GVN0 87 aa9.83□□□□□ -0.84
NR1H3-227ENST00000498548 SMIM1B2RUZ4 78 aa9.83□□□□□ -0.84
NR1H3-227ENST00000498548 UBE2BP63146 152 aa9.83□□□□□ -0.84
NR1H3-227ENST00000498548 URB1-AS1Q96HZ7 61 aa9.83□□□□□ -0.84
NR1H3-227ENST00000498548 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
NR1H3-227ENST00000498548 SPINK8P0C7L1 97 aa9.82□□□□□ -0.84
NR1H3-227ENST00000498548 PMVKQ15126 192 aa9.82□□□□□ -0.84
NR1H3-227ENST00000498548 HIST1H2BLQ99880 126 aa9.82□□□□□ -0.84
NR1H3-227ENST00000498548 F8VRH5 84 aa9.81□□□□□ -0.84
NR1H3-227ENST00000498548 NUPR1O60356 82 aa9.81□□□□□ -0.84
NR1H3-227ENST00000498548 SMIM6P0DI80 62 aa9.81□□□□□ -0.84
NR1H3-227ENST00000498548 S100A2P29034 98 aa9.81□□□□□ -0.84
NR1H3-227ENST00000498548 LINC00310P59036 64 aa9.81□□□□□ -0.84
NR1H3-227ENST00000498548 COX7B2Q8TF08 81 aa9.81□□□□□ -0.84
NR1H3-227ENST00000498548 IGLV5-45A0A087WSX0 123 aa9.8□□□□□ -0.84
NR1H3-227ENST00000498548 A0A096LNJ9 63 aa9.8□□□□□ -0.84
NR1H3-227ENST00000498548 LINC01549A6NIU2 74 aa9.8□□□□□ -0.84
NR1H3-227ENST00000498548 PMCHL1Q16048 86 aa9.8□□□□□ -0.84
NR1H3-227ENST00000498548 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
NR1H3-227ENST00000498548 C18orf32Q8TCD1 76 aa9.8□□□□□ -0.84
NR1H3-227ENST00000498548 LINC00614P0C842 121 aa9.79□□□□□ -0.84
NR1H3-227ENST00000498548 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
NR1H3-227ENST00000498548 FABP4P15090 132 aa9.78□□□□□ -0.84
NR1H3-227ENST00000498548 C12orf57Q99622 126 aa9.78□□□□□ -0.84
NR1H3-227ENST00000498548 SERF1AO75920 110 aa9.77□□□□□ -0.85
NR1H3-227ENST00000498548 CXCL5P42830 114 aa9.77□□□□□ -0.85
NR1H3-227ENST00000498548 BAGE3Q86Y29 109 aa9.77□□□□□ -0.85
NR1H3-227ENST00000498548 DIRC1Q969H9 104 aa9.77□□□□□ -0.85
NR1H3-227ENST00000498548 PYY3Q5JQD4 70 aa9.76□□□□□ -0.85
NR1H3-227ENST00000498548 H0Y9J4 135 aa9.75□□□□□ -0.85
NR1H3-227ENST00000498548 PRR26Q8N8Z3 221 aa9.75□□□□□ -0.85
NR1H3-227ENST00000498548 UBR4Q5T4S7 5183 aa9.75□□□□□ -0.85
NR1H3-227ENST00000498548 HBDP02042 147 aa9.74□□□□□ -0.85
NR1H3-227ENST00000498548 IGLC3P0DOY3 106 aa9.74□□□□□ -0.85
NR1H3-227ENST00000498548 JOSD1Q15040 202 aaPredicted RBP9.74□□□□□ -0.85
NR1H3-227ENST00000498548 H3BRM9 83 aa9.73□□□□□ -0.85
NR1H3-227ENST00000498548 ZNF22P17026 224 aaPredicted RBP9.73□□□□□ -0.85
NR1H3-227ENST00000498548 LBHQ53QV2 105 aaPredicted RBP9.72□□□□□ -0.85
NR1H3-227ENST00000498548 GAGE10A6NGK3 116 aa9.7□□□□□ -0.86
NR1H3-227ENST00000498548 RPL37AP8A6NKH3 93 aa9.7□□□□□ -0.86
NR1H3-227ENST00000498548 PFN2P35080 140 aa9.7□□□□□ -0.86
NR1H3-227ENST00000498548 MRPL55Q7Z7F7 128 aaKnown RBP9.7□□□□□ -0.86
NR1H3-227ENST00000498548 CHCHD1Q96BP2 118 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms