RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 C18orf32Q8TCD1 76 aa7.44□□□□□ -1.22
THBS3-209ENST00000498500 C6orf48Q9UBA6 75 aa7.44□□□□□ -1.22
THBS3-209ENST00000498500 G0S2P27469 103 aa7.43□□□□□ -1.22
THBS3-209ENST00000498500 RPL18AQ02543 176 aaKnown RBP7.43□□□□□ -1.22
THBS3-209ENST00000498500 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
THBS3-209ENST00000498500 UNQ6190/PRO20217Q6UXQ8 127 aa7.43□□□□□ -1.22
THBS3-209ENST00000498500 FA2HQ7L5A8 372 aa7.43□□□□□ -1.22
THBS3-209ENST00000498500 SCGB3A1Q96QR1 104 aa7.43□□□□□ -1.22
THBS3-209ENST00000498500 TRAPPC1Q9Y5R8 145 aa7.43□□□□□ -1.22
THBS3-209ENST00000498500 PAPPA-AS1Q5QFB9 102 aa7.42□□□□□ -1.22
THBS3-209ENST00000498500 Q6ZRP5 223 aa7.42□□□□□ -1.22
THBS3-209ENST00000498500 CDKN2A-AS1Q9UH64 79 aa7.42□□□□□ -1.22
THBS3-209ENST00000498500 A0A1W2PNN7 141 aa7.41□□□□□ -1.22
THBS3-209ENST00000498500 LINC01549A6NIU2 74 aa7.41□□□□□ -1.22
THBS3-209ENST00000498500 TLX1NBP0CAT3 122 aa7.41□□□□□ -1.22
THBS3-209ENST00000498500 HERVK_113P63121 156 aa7.41□□□□□ -1.22
THBS3-209ENST00000498500 C2orf82Q6UX34 121 aa7.41□□□□□ -1.22
THBS3-209ENST00000498500 SMCO4Q9NRQ5 59 aa7.41□□□□□ -1.22
THBS3-209ENST00000498500 IGLV5-45A0A087WSX0 123 aa7.4□□□□□ -1.22
THBS3-209ENST00000498500 TRBV30A0A0K0K1B3 111 aa7.39□□□□□ -1.23
THBS3-209ENST00000498500 TINCRA0A1B0GVN0 87 aa7.39□□□□□ -1.23
THBS3-209ENST00000498500 COLCA2A8K830 154 aa7.39□□□□□ -1.23
THBS3-209ENST00000498500 SMIM1B2RUZ4 78 aa7.39□□□□□ -1.23
THBS3-209ENST00000498500 SMCPP49901 116 aaPredicted RBP7.39□□□□□ -1.23
THBS3-209ENST00000498500 SEC11AP67812 179 aa7.39□□□□□ -1.23
THBS3-209ENST00000498500 C9orf116Q5BN46 136 aaPredicted RBP7.39□□□□□ -1.23
THBS3-209ENST00000498500 Q8IZM0 81 aa7.39□□□□□ -1.23
THBS3-209ENST00000498500 CST9LQ9H4G1 147 aa7.39□□□□□ -1.23
THBS3-209ENST00000498500 PMCHL1Q16048 86 aa7.38□□□□□ -1.23
THBS3-209ENST00000498500 GEMIN7Q9H840 131 aaKnown RBP7.38□□□□□ -1.23
THBS3-209ENST00000498500 A0A0U1RQV1 116 aa7.37□□□□□ -1.23
THBS3-209ENST00000498500 FAM168BA1KXE4 195 aa7.37□□□□□ -1.23
THBS3-209ENST00000498500 HBDP02042 147 aa7.37□□□□□ -1.23
THBS3-209ENST00000498500 LINC00614P0C842 121 aa7.37□□□□□ -1.23
THBS3-209ENST00000498500 PMVKQ15126 192 aa7.37□□□□□ -1.23
THBS3-209ENST00000498500 PDZD11Q5EBL8 140 aa7.37□□□□□ -1.23
THBS3-209ENST00000498500 KRTAP7-1Q8IUC3 87 aa7.37□□□□□ -1.23
THBS3-209ENST00000498500 LINC00469Q8N7U9 141 aa7.37□□□□□ -1.23
THBS3-209ENST00000498500 TOMM7Q9P0U1 55 aa7.37□□□□□ -1.23
THBS3-209ENST00000498500 IGLC3P0DOY3 106 aa7.36□□□□□ -1.23
THBS3-209ENST00000498500 MUC2Q02817 5179 aa7.35□□□□□ -1.23
THBS3-209ENST00000498500 NDUFC2-KCTD14E9PQ53 114 aa7.35□□□□□ -1.23
THBS3-209ENST00000498500 PRSS2P07478 247 aa7.35□□□□□ -1.23
THBS3-209ENST00000498500 GAGE2EQ4V326 116 aa7.35□□□□□ -1.23
THBS3-209ENST00000498500 C9orf129Q5T035 196 aaKnown RBP7.35□□□□□ -1.23
THBS3-209ENST00000498500 PHF5AQ7RTV0 110 aaKnown RBP7.35□□□□□ -1.23
THBS3-209ENST00000498500 PACRGQ96M98 296 aaPredicted RBP7.35□□□□□ -1.23
THBS3-209ENST00000498500 GAGE2DQ9UEU5 116 aa7.35□□□□□ -1.23
THBS3-209ENST00000498500 SPINK8P0C7L1 97 aa7.34□□□□□ -1.23
THBS3-209ENST00000498500 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
THBS3-209ENST00000498500 F8VRH5 84 aa7.33□□□□□ -1.24
THBS3-209ENST00000498500 ZNF22P17026 224 aaPredicted RBP7.33□□□□□ -1.24
THBS3-209ENST00000498500 CXCL5P42830 114 aa7.33□□□□□ -1.24
THBS3-209ENST00000498500 RAB5BP61020 215 aa7.33□□□□□ -1.24
THBS3-209ENST00000498500 CKS1BP61024 79 aa7.33□□□□□ -1.24
THBS3-209ENST00000498500 C6orf226Q5I0X4 101 aa7.33□□□□□ -1.24
THBS3-209ENST00000498500 FAM19A5Q7Z5A7 132 aaPredicted RBP7.33□□□□□ -1.24
THBS3-209ENST00000498500 KRTAP11-1Q8IUC1 163 aa7.33□□□□□ -1.24
THBS3-209ENST00000498500 COX7B2Q8TF08 81 aa7.33□□□□□ -1.24
THBS3-209ENST00000498500 KRTAP9-6A0A140TA67 174 aa7.32□□□□□ -1.24
THBS3-209ENST00000498500 PRR26Q8N8Z3 221 aa7.32□□□□□ -1.24
THBS3-209ENST00000498500 IGLV5-39A0A0G2JS06 123 aa7.31□□□□□ -1.24
THBS3-209ENST00000498500 ATP5LO75964 103 aa7.31□□□□□ -1.24
THBS3-209ENST00000498500 TRGC2P03986 189 aa7.31□□□□□ -1.24
THBS3-209ENST00000498500 LINC00310P59036 64 aa7.31□□□□□ -1.24
THBS3-209ENST00000498500 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
THBS3-209ENST00000498500 CHCHD1Q96BP2 118 aaKnown RBP7.31□□□□□ -1.24
THBS3-209ENST00000498500 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
THBS3-209ENST00000498500 M0QXV9 152 aa7.3□□□□□ -1.24
THBS3-209ENST00000498500 NDUFA6P56556 154 aa7.3□□□□□ -1.24
THBS3-209ENST00000498500 PRR4Q16378 134 aa7.3□□□□□ -1.24
THBS3-209ENST00000498500 C1orf137Q5JT78 98 aa7.3□□□□□ -1.24
THBS3-209ENST00000498500 H3BRM9 83 aa7.29□□□□□ -1.24
THBS3-209ENST00000498500 BAGE3Q86Y29 109 aa7.28□□□□□ -1.24
THBS3-209ENST00000498500 XAGE1AQ9HD64 81 aa7.28□□□□□ -1.24
THBS3-209ENST00000498500 TRAV12-1A0A0B4J245 112 aa7.27□□□□□ -1.25
THBS3-209ENST00000498500 LOC105371267A0A1B0GV96 52 aa7.27□□□□□ -1.25
THBS3-209ENST00000498500 DIRC1Q969H9 104 aa7.27□□□□□ -1.25
THBS3-209ENST00000498500 IFI27L1Q96BM0 104 aa7.27□□□□□ -1.25
THBS3-209ENST00000498500 NUPR1O60356 82 aa7.26□□□□□ -1.25
THBS3-209ENST00000498500 SERF1AO75920 110 aa7.26□□□□□ -1.25
THBS3-209ENST00000498500 FAM19A2Q8N3H0 131 aa7.26□□□□□ -1.25
THBS3-209ENST00000498500 CHTOPQ9Y3Y2 248 aaKnown RBP7.26□□□□□ -1.25
THBS3-209ENST00000498500 HSBP1O75506 76 aa7.25□□□□□ -1.25
THBS3-209ENST00000498500 FAT4Q6V0I7 4981 aa7.24□□□□□ -1.25
THBS3-209ENST00000498500 IGLV7-43P04211 117 aa7.24□□□□□ -1.25
THBS3-209ENST00000498500 TMEM170BQ5T4T1 132 aa7.24□□□□□ -1.25
THBS3-209ENST00000498500 C22orf24Q9Y442 160 aa7.24□□□□□ -1.25
THBS3-209ENST00000498500 IGLV1-50A0A075B6I6 118 aa7.23□□□□□ -1.25
THBS3-209ENST00000498500 TMEM223A0PJW6 202 aa7.23□□□□□ -1.25
THBS3-209ENST00000498500 H0Y9J4 135 aa7.23□□□□□ -1.25
THBS3-209ENST00000498500 UBE2BP63146 152 aa7.23□□□□□ -1.25
THBS3-209ENST00000498500 ZNF625Q96I27 306 aaPredicted RBP7.23□□□□□ -1.25
THBS3-209ENST00000498500 TP73-AS1Q9UF72 201 aa7.23□□□□□ -1.25
THBS3-209ENST00000498500 IGLV5-37A0A075B6J1 123 aa7.22□□□□□ -1.25
THBS3-209ENST00000498500 HIST1H2BKO60814 126 aa7.22□□□□□ -1.25
THBS3-209ENST00000498500 HIST1H2BJP06899 126 aa7.22□□□□□ -1.25
THBS3-209ENST00000498500 HIST1H2BOP23527 126 aa7.22□□□□□ -1.25
THBS3-209ENST00000498500 HIST1H2BBP33778 126 aa7.22□□□□□ -1.25
THBS3-209ENST00000498500 HIST1H2BDP58876 126 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms