RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 RPL24P83731 157 aaKnown RBP11.97□□□□□ -0.49
CHRNA4-206ENST00000498043 C2orf82Q6UX34 121 aa11.97□□□□□ -0.49
CHRNA4-206ENST00000498043 C9orf118A6NHY6 69 aa11.96□□□□□ -0.49
CHRNA4-206ENST00000498043 EIF4EBP3O60516 100 aaPredicted RBP11.95□□□□□ -0.5
CHRNA4-206ENST00000498043 CFAP161Q6P656 301 aa11.95□□□□□ -0.5
CHRNA4-206ENST00000498043 KIAA0087Q14695 138 aa11.95□□□□□ -0.5
CHRNA4-206ENST00000498043 CSMD3Q7Z407 3707 aa11.94□□□□□ -0.5
CHRNA4-206ENST00000498043 CFC1BP0CG36 223 aa11.94□□□□□ -0.5
CHRNA4-206ENST00000498043 CFC1P0CG37 223 aa11.94□□□□□ -0.5
CHRNA4-206ENST00000498043 CKS1BP61024 79 aa11.94□□□□□ -0.5
CHRNA4-206ENST00000498043 Q9HAA7 133 aa11.94□□□□□ -0.5
CHRNA4-206ENST00000498043 VAMP3Q15836 100 aa11.93□□□□□ -0.5
CHRNA4-206ENST00000498043 SFTA2Q6UW10 78 aa11.93□□□□□ -0.5
CHRNA4-206ENST00000498043 C1orf43Q9BWL3 253 aa11.93□□□□□ -0.5
CHRNA4-206ENST00000498043 LYSTQ99698 3801 aa11.93□□□□□ -0.5
CHRNA4-206ENST00000498043 SPAG11BQ08648 103 aa11.93□□□□□ -0.5
CHRNA4-206ENST00000498043 KRTAP26-1Q6PEX3 210 aa11.93□□□□□ -0.5
CHRNA4-206ENST00000498043 LINC00308Q8TCZ7 52 aa11.93□□□□□ -0.5
CHRNA4-206ENST00000498043 PFN2P35080 140 aa11.92□□□□□ -0.5
CHRNA4-206ENST00000498043 LINC00526Q96FQ7 95 aa11.92□□□□□ -0.5
CHRNA4-206ENST00000498043 UPK3BQ9BT76 320 aa11.92□□□□□ -0.5
CHRNA4-206ENST00000498043 APLNQ9ULZ1 77 aa11.92□□□□□ -0.5
CHRNA4-206ENST00000498043 IGKV2D-24A0A075B6R9 120 aa11.91□□□□□ -0.5
CHRNA4-206ENST00000498043 IFITM1P13164 125 aa11.91□□□□□ -0.5
CHRNA4-206ENST00000498043 PGPEP1Q9NXJ5 209 aa11.91□□□□□ -0.5
CHRNA4-206ENST00000498043 LINC00158P58513 81 aa11.91□□□□□ -0.5
CHRNA4-206ENST00000498043 SOSTDC1Q6X4U4 206 aa11.91□□□□□ -0.5
CHRNA4-206ENST00000498043 ERG28Q9UKR5 140 aa11.91□□□□□ -0.5
CHRNA4-206ENST00000498043 KLK5Q9Y337 293 aaPredicted RBP11.91□□□□□ -0.5
CHRNA4-206ENST00000498043 IBA57-AS1B1ANH7 110 aa11.9□□□□□ -0.5
CHRNA4-206ENST00000498043 CXCL5P42830 114 aa11.9□□□□□ -0.5
CHRNA4-206ENST00000498043 C6orf223Q8N319 242 aa11.9□□□□□ -0.5
CHRNA4-206ENST00000498043 MIR7-3HGQ8N6C7 128 aa11.9□□□□□ -0.5
CHRNA4-206ENST00000498043 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.9□□□□□ -0.51
CHRNA4-206ENST00000498043 NUPR2A6NF83 97 aa11.9□□□□□ -0.51
CHRNA4-206ENST00000498043 DYNC2H1Q8NCM8 4307 aaKnown RBP11.89□□□□□ -0.51
CHRNA4-206ENST00000498043 A0A1W2PPM0 123 aa11.89□□□□□ -0.51
CHRNA4-206ENST00000498043 UBE2DNLQ8IWF7 75 aa11.88□□□□□ -0.51
CHRNA4-206ENST00000498043 A0A0B4J2C4 111 aa11.88□□□□□ -0.51
CHRNA4-206ENST00000498043 TSPAN13O95857 204 aa11.88□□□□□ -0.51
CHRNA4-206ENST00000498043 PRO1854Q9UHT4 67 aa11.88□□□□□ -0.51
CHRNA4-206ENST00000498043 HIGD2BQ4VC39 106 aa11.87□□□□□ -0.51
CHRNA4-206ENST00000498043 C9orf116Q5BN46 136 aaPredicted RBP11.86□□□□□ -0.51
CHRNA4-206ENST00000498043 C10orf25Q5T742 122 aa11.86□□□□□ -0.51
CHRNA4-206ENST00000498043 COPS9Q8WXC6 57 aa11.86□□□□□ -0.51
CHRNA4-206ENST00000498043 H7C2G1 150 aa11.85□□□□□ -0.51
CHRNA4-206ENST00000498043 FABP2P12104 132 aa11.85□□□□□ -0.51
CHRNA4-206ENST00000498043 UNQ6190/PRO20217Q6UXQ8 127 aa11.85□□□□□ -0.51
CHRNA4-206ENST00000498043 C15orf56Q8N910 161 aa11.85□□□□□ -0.51
CHRNA4-206ENST00000498043 DNAH7Q8WXX0 4024 aa11.85□□□□□ -0.51
CHRNA4-206ENST00000498043 FBN3Q75N90 2809 aa11.84□□□□□ -0.51
CHRNA4-206ENST00000498043 PLECQ15149 4684 aaKnown RBP11.83□□□□□ -0.52
CHRNA4-206ENST00000498043 STARD9Q9P2P6 4700 aa11.83□□□□□ -0.52
CHRNA4-206ENST00000498043 UBE2V1Q13404 147 aa11.83□□□□□ -0.52
CHRNA4-206ENST00000498043 SPCS1Q9Y6A9 102 aa11.83□□□□□ -0.52
CHRNA4-206ENST00000498043 ZNF561-AS1K7EIQ3 104 aa11.82□□□□□ -0.52
CHRNA4-206ENST00000498043 NTN5Q8WTR8 489 aaPredicted RBP11.82□□□□□ -0.52
CHRNA4-206ENST00000498043 DNAH1Q9P2D7 4330 aa11.82□□□□□ -0.52
CHRNA4-206ENST00000498043 TENM2Q9NT68 2774 aa11.82□□□□□ -0.52
CHRNA4-206ENST00000498043 Q1RN00 199 aa11.82□□□□□ -0.52
CHRNA4-206ENST00000498043 KRTAP1-5Q9BYS1 174 aa11.82□□□□□ -0.52
CHRNA4-206ENST00000498043 GAGE10A6NGK3 116 aa11.81□□□□□ -0.52
CHRNA4-206ENST00000498043 K7EP34 96 aa11.81□□□□□ -0.52
CHRNA4-206ENST00000498043 SND1-IT1Q9HBX3 110 aa11.8□□□□□ -0.52
CHRNA4-206ENST00000498043 LOC107984156A0A0G2JMH3 177 aa11.8□□□□□ -0.52
CHRNA4-206ENST00000498043 COX17Q14061 63 aa11.8□□□□□ -0.52
CHRNA4-206ENST00000498043 CASC10Q5T4H9 136 aa11.8□□□□□ -0.52
CHRNA4-206ENST00000498043 ARL17AQ8IVW1 177 aa11.8□□□□□ -0.52
CHRNA4-206ENST00000498043 PPDPFQ9H3Y8 114 aa11.8□□□□□ -0.52
CHRNA4-206ENST00000498043 RPL13AP40429 203 aaKnown RBP11.79□□□□□ -0.52
CHRNA4-206ENST00000498043 RMI2Q96E14 147 aa11.79□□□□□ -0.52
CHRNA4-206ENST00000498043 CAMK2N2Q96S95 79 aa11.79□□□□□ -0.52
CHRNA4-206ENST00000498043 GTF2H5Q6ZYL4 71 aa11.79□□□□□ -0.52
CHRNA4-206ENST00000498043 C6orf48Q9UBA6 75 aa11.79□□□□□ -0.52
CHRNA4-206ENST00000498043 GVQW2A0A096LPI5 108 aaPredicted RBP11.77□□□□□ -0.53
CHRNA4-206ENST00000498043 PSMB2P49721 201 aa11.77□□□□□ -0.53
CHRNA4-206ENST00000498043 Q6ZRU5 148 aa11.75□□□□□ -0.53
CHRNA4-206ENST00000498043 IGKV2-28A0A075B6P5 120 aa11.74□□□□□ -0.53
CHRNA4-206ENST00000498043 USP17L23D6RBM5 183 aa11.74□□□□□ -0.53
CHRNA4-206ENST00000498043 IGKV2D-28P01615 120 aa11.74□□□□□ -0.53
CHRNA4-206ENST00000498043 C2orf48Q96LS8 159 aa11.74□□□□□ -0.53
CHRNA4-206ENST00000498043 LECT2O14960 151 aa11.74□□□□□ -0.53
CHRNA4-206ENST00000498043 TRBV30A0A0K0K1B3 111 aa11.73□□□□□ -0.53
CHRNA4-206ENST00000498043 TRIAP1O43715 76 aa11.72□□□□□ -0.53
CHRNA4-206ENST00000498043 LINC00337Q8N6G1 96 aa11.72□□□□□ -0.53
CHRNA4-206ENST00000498043 SCGB1C2P0DMR2 95 aa11.72□□□□□ -0.53
CHRNA4-206ENST00000498043 LYRM7Q5U5X0 104 aa11.72□□□□□ -0.53
CHRNA4-206ENST00000498043 H3BMG7 143 aa11.71□□□□□ -0.54
CHRNA4-206ENST00000498043 TRAV13-2A0A0B4J235 113 aa11.7□□□□□ -0.54
CHRNA4-206ENST00000498043 DNAH10Q8IVF4 4471 aa11.7□□□□□ -0.54
CHRNA4-206ENST00000498043 SYCNQ0VAF6 134 aa11.69□□□□□ -0.54
CHRNA4-206ENST00000498043 TGP01266 2768 aa11.69□□□□□ -0.54
CHRNA4-206ENST00000498043 TCL1BO95988 128 aa11.69□□□□□ -0.54
CHRNA4-206ENST00000498043 Q8NDZ9 215 aa11.69□□□□□ -0.54
CHRNA4-206ENST00000498043 MUC7Q8TAX7 377 aa11.69□□□□□ -0.54
CHRNA4-206ENST00000498043 NBDYA0A0U1RRE5 68 aa11.68□□□□□ -0.54
CHRNA4-206ENST00000498043 XAGE1AQ9HD64 81 aa11.68□□□□□ -0.54
CHRNA4-206ENST00000498043 PSCAO43653 123 aa11.67□□□□□ -0.54
CHRNA4-206ENST00000498043 PRR3P79522 188 aaKnown RBP11.67□□□□□ -0.54
CHRNA4-206ENST00000498043 TTC32Q5I0X7 151 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms