RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 DCANP1Q8TF63 244 aa3.36□□□□□ -1.87
GARNL3-221ENST00000497703 LINC01587Q99440 93 aa3.36□□□□□ -1.87
GARNL3-221ENST00000497703 HIGD2AQ9BW72 106 aa3.36□□□□□ -1.87
GARNL3-221ENST00000497703 C11orf68Q9H3H3 251 aaKnown RBP3.36□□□□□ -1.87
GARNL3-221ENST00000497703 APOBP04114 4563 aaKnown RBP3.36□□□□□ -1.87
GARNL3-221ENST00000497703 FAT2Q9NYQ8 4349 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 TMSB15BA0A087X1C1 80 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 DEFB131BA0A096LNP1 70 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 A0A1B0GUT8 65 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 C2orf70A6NJV1 201 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 LGALS3P17931 250 aaKnown RBP3.35□□□□□ -1.87
GARNL3-221ENST00000497703 S100A2P29034 98 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 RPS20P60866 119 aaKnown RBP3.35□□□□□ -1.87
GARNL3-221ENST00000497703 HIST1H1AQ02539 215 aaPredicted RBP3.35□□□□□ -1.87
GARNL3-221ENST00000497703 JOSD1Q15040 202 aaPredicted RBP3.35□□□□□ -1.87
GARNL3-221ENST00000497703 IQCJQ1A5X6 159 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 TMEM78Q5T7P6 136 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 Q6AWC8 147 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 ZFAND2AQ8N6M9 145 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 C18orf32Q8TCD1 76 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 PACRGQ96M98 296 aaPredicted RBP3.35□□□□□ -1.87
GARNL3-221ENST00000497703 LENEPQ9Y5L5 61 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 DNAH2Q9P225 4427 aa3.35□□□□□ -1.87
GARNL3-221ENST00000497703 DNAH6Q9C0G6 4158 aa3.34□□□□□ -1.87
GARNL3-221ENST00000497703 IGKV3-7A0A075B6H7 116 aa3.34□□□□□ -1.87
GARNL3-221ENST00000497703 ORM1P02763 201 aa3.34□□□□□ -1.87
GARNL3-221ENST00000497703 GPX1P07203 203 aa3.34□□□□□ -1.87
GARNL3-221ENST00000497703 DEFB114Q30KQ6 69 aa3.34□□□□□ -1.87
GARNL3-221ENST00000497703 KRTAP25-1Q3LHN0 102 aa3.34□□□□□ -1.87
GARNL3-221ENST00000497703 BAGE3Q86Y29 109 aa3.34□□□□□ -1.87
GARNL3-221ENST00000497703 CNFNQ9BYD5 112 aa3.34□□□□□ -1.87
GARNL3-221ENST00000497703 MS4A6AQ9H2W1 248 aa3.34□□□□□ -1.87
GARNL3-221ENST00000497703 VPS13DQ5THJ4 4388 aa3.33□□□□□ -1.88
GARNL3-221ENST00000497703 MUC21A0A0G2JKD1 596 aa3.33□□□□□ -1.88
GARNL3-221ENST00000497703 MUC21A0A140T8X8 626 aa3.33□□□□□ -1.88
GARNL3-221ENST00000497703 MRPL51Q4U2R6 128 aaKnown RBP3.33□□□□□ -1.88
GARNL3-221ENST00000497703 SAMD13Q5VXD3 122 aa3.33□□□□□ -1.88
GARNL3-221ENST00000497703 NIT1Q86X76 327 aa3.33□□□□□ -1.88
GARNL3-221ENST00000497703 FER1L6-AS1Q8NA97 138 aa3.33□□□□□ -1.88
GARNL3-221ENST00000497703 NIT2Q9NQR4 276 aa3.33□□□□□ -1.88
GARNL3-221ENST00000497703 TRAV2A0A0B4J234 112 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 TRAV21A0A0B4J279 112 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 A0A0J9YX75 114 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 NBDYA0A0U1RRE5 68 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 A8MTW9 85 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 A8MWP4 228 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 CRXO43186 299 aaPredicted RBP3.32□□□□□ -1.88
GARNL3-221ENST00000497703 RNASE4P34096 147 aaKnown RBP3.32□□□□□ -1.88
GARNL3-221ENST00000497703 HAMPP81172 84 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 PSMG4Q5JS54 123 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 AMTNQ6UX39 209 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 BORCS7Q96B45 105 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 ODF3Q96PU9 254 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 TMEM191AQ9H0A3 160 aa3.32□□□□□ -1.88
GARNL3-221ENST00000497703 A6NED7 52 aa3.31□□□□□ -1.88
GARNL3-221ENST00000497703 H3BMM0 161 aa3.31□□□□□ -1.88
GARNL3-221ENST00000497703 GNRH2O43555 120 aa3.31□□□□□ -1.88
GARNL3-221ENST00000497703 RNASE3P12724 160 aaKnown RBP3.31□□□□□ -1.88
GARNL3-221ENST00000497703 FUSP35637 526 aaKnown RBP eCLIP3.31□□□□□ -1.88
GARNL3-221ENST00000497703 S100A12P80511 92 aa3.31□□□□□ -1.88
GARNL3-221ENST00000497703 MRPL52Q86TS9 123 aaKnown RBP3.31□□□□□ -1.88
GARNL3-221ENST00000497703 FAM19A2Q8N3H0 131 aa3.31□□□□□ -1.88
GARNL3-221ENST00000497703 OR10AG1Q8NH19 301 aa3.31□□□□□ -1.88
GARNL3-221ENST00000497703 UBE2WQ96B02 151 aa3.31□□□□□ -1.88
GARNL3-221ENST00000497703 CHCHD1Q96BP2 118 aaKnown RBP3.31□□□□□ -1.88
GARNL3-221ENST00000497703 DYNC1H1Q14204 4646 aaKnown RBP3.31□□□□□ -1.88
GARNL3-221ENST00000497703 DNAH17Q9UFH2 4485 aa3.31□□□□□ -1.88
GARNL3-221ENST00000497703 C7orf71A4D174 169 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 KNCNA6PVL3 124 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 D6R8Y8 96 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 H3BVH4 76 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 NPYP01303 97 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 LINC00614P0C842 121 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 C3orf79P0CE67 100 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 DEFB131AP59861 70 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 SNRPD3P62318 126 aaKnown RBP3.3□□□□□ -1.88
GARNL3-221ENST00000497703 CD164Q04900 197 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 TDRG1Q3Y452 100 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 EBLN2Q6P2I7 272 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 FOXI2Q6ZQN5 318 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 PRELID3AQ96N28 172 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 CRCT1Q9UGL9 99 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
GARNL3-221ENST00000497703 VPS13BQ7Z7G8 4022 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 TRAV12-2A0A075B6T6 113 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 TRAV12-3A0A0B4J271 114 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 IGHV1-24A0A0C4DH33 117 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 LINC01546A6NGU7 62 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 LINC00587B1AMM8 73 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 M0R2Z0 102 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 NCR2O95944 276 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 HLA-DRB4P13762 266 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 EVI2AP22794 236 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 TSPOP30536 169 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 IFI27P40305 119 aaPredicted RBP3.29□□□□□ -1.88
GARNL3-221ENST00000497703 PMCHL1Q16048 86 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 HLA-DRB4X5D2U9 266 aa3.29□□□□□ -1.88
GARNL3-221ENST00000497703 PPBPP02775 128 aa3.28□□□□□ -1.88
GARNL3-221ENST00000497703 HTN3P15516 51 aa3.28□□□□□ -1.88
GARNL3-221ENST00000497703 S100A4P26447 101 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms