RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 C4orf22Q6V702 233 aa1.07□□□□□ -2.24
CKS1BP2-201ENST00000497342 BRK1Q8WUW1 75 aa1.07□□□□□ -2.24
CKS1BP2-201ENST00000497342 SFT2D1Q8WV19 159 aa1.07□□□□□ -2.24
CKS1BP2-201ENST00000497342 Q96M85 177 aa1.07□□□□□ -2.24
CKS1BP2-201ENST00000497342 TP53RKQ96S44 253 aa1.07□□□□□ -2.24
CKS1BP2-201ENST00000497342 SDF2Q99470 211 aa1.07□□□□□ -2.24
CKS1BP2-201ENST00000497342 TXNDC17Q9BRA2 123 aa1.07□□□□□ -2.24
CKS1BP2-201ENST00000497342 NIT2Q9NQR4 276 aa1.07□□□□□ -2.24
CKS1BP2-201ENST00000497342 MPC1Q9Y5U8 109 aa1.07□□□□□ -2.24
CKS1BP2-201ENST00000497342 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 MIF4GDA9UHW6 222 aaKnown RBP1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 APOC4-APOC2K7ER74 178 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 M0R2P5 195 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 M0R2Z0 102 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 MRPS14O60783 128 aaKnown RBP1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 IGLV3-1P01715 115 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 TRACP01848 142 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 APOC2P02655 101 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 MGST1P10620 155 aaKnown RBP1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 SLC25A4P12235 298 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 CDK6Q00534 326 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 EMX2Q04743 252 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 TDRG1Q3Y452 100 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 HSD17B12Q53GQ0 312 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 C10orf55Q5SWW7 151 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 GLIPR1L1Q6UWM5 242 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 IZUMO2Q6UXV1 221 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 OR10AG1Q8NH19 301 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 SPRR2FQ96RM1 72 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 TMEM191AQ9H0A3 160 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 TPRKBQ9Y3C4 175 aa1.06□□□□□ -2.24
CKS1BP2-201ENST00000497342 TRBV20-1A0A075B6N2 111 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 PNMA8CA0A1B0GUJ8 204 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 LOC107986453A0A1B0GWG9 222 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 LINC00587B1AMM8 73 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 H3BUA1 57 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 YPEL1O60688 119 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 SMIM24O75264 130 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 ERC2-IT1O76042 136 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 IFNGP01579 166 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 CRPP02741 224 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 CD3DP04234 171 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 MT1FP04733 61 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 HMGN2P05204 90 aaKnown RBP1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 HIST1H1BP16401 226 aaKnown RBP1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 RRAS2P62070 204 aaPredicted RBP1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 PCOTHQ58A44 107 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 HEPN1Q6WQI6 88 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 CTAGE3PQ8IX95 158 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 FAM19A2Q8N3H0 131 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 OR2T35Q8NGX2 323 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 RNASE11Q8TAA1 199 aaKnown RBP1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 TMEM254Q8TBM7 123 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 AMELYQ99218 206 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 CST11Q9H112 138 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 PRO0461Q9UI25 63 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 LINC00312Q9Y6C7 94 aa1.05□□□□□ -2.24
CKS1BP2-201ENST00000497342 LOC110117498A0A087WWA1 95 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 TRAV2A0A0B4J234 112 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 IFITM5A6NNB3 132 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 ZNF736B4DX44 427 aaPredicted RBP1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 ZNF670-ZNF695F2Z2N8 137 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 CDC42EP2O14613 210 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 INE1O15225 51 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 PITX3O75364 302 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 MT-ND6P03923 174 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 CD14P08571 375 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 ETV6P41212 452 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 EDDM3BP56851 147 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 DEFA5Q01523 94 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 RNASE10Q5GAN6 216 aaKnown RBP1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 UNQ5815/PRO19632Q6UWF5 114 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 C2orf82Q6UX34 121 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 ATP11AUNQ6ZP68 121 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 FOXI2Q6ZQN5 318 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 FP248Q71RG6 208 aaPredicted RBP1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 ATOH7Q8N100 152 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 CLEC2BQ92478 149 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 RAB37Q96AX2 223 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 USMG5Q96IX5 58 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 GGACTQ9BVM4 153 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 SMIM3Q9BZL3 60 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 CST9LQ9H4G1 147 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 MED9Q9NWA0 146 aa1.04□□□□□ -2.24
CKS1BP2-201ENST00000497342 A0A0J9YY99 117 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 A0A1B0GV90 55 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 J3QR89 54 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 APOC1P02654 83 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 Q8TAT8 98 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 ARL11Q969Q4 196 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 LINC00052Q96N35 136 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 AP1S3Q96PC3 154 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 VPS25Q9BRG1 176 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 FAM103A1Q9BTL3 118 aaKnown RBP1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 LPAR5Q9H1C0 372 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 BANF2Q9H503 90 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 SAR1AQ9NR31 198 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 COMMD3Q9UBI1 195 aa1.03□□□□□ -2.24
CKS1BP2-201ENST00000497342 TNFSF18Q9UNG2 199 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms