RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 LINC00588Q9Y4M8 146 aa3.58□□□□□ -1.84
GGPS1-208ENST00000497327 DYNC2H1Q8NCM8 4307 aaKnown RBP3.57□□□□□ -1.84
GGPS1-208ENST00000497327 TRAV13-1A0A0B4J241 112 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 TRAV8-6A0A0B4J262 113 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 IGHV3OR16-9A0A0B4J2B5 98 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 LINC00959A0A1B0GUT2 108 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 IGLL5B9A064 214 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 TSTD3H0UI37 97 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 CCL25O15444 150 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 DDTP30046 118 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 DSCR10P59022 87 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 HERVK_113P63121 156 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 SEC11AP67812 179 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 COL7A1Q02388 2944 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 LINC01556Q5JQF7 62 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 ENHOQ6UWT2 76 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 WFDC10BQ8IUB3 73 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 LINC00269Q8N2A0 174 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 MAPKAPK5-AS1Q8N8E1 139 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 UPK3BQ9BT76 320 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 TTTY13Q9BZ97 58 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 UQCR10Q9UDW1 63 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 TP73-AS1Q9UF72 201 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 CDKN2A-AS1Q9UH64 79 aa3.57□□□□□ -1.84
GGPS1-208ENST00000497327 MRPS16Q9Y3D3 137 aaKnown RBP3.57□□□□□ -1.84
GGPS1-208ENST00000497327 IGHV1-58A0A0C4DH39 117 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 PCP4L1A6NKN8 68 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 LINC00587B1AMM8 73 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 LEPROTO15243 131 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 DNAH10OSP0CZ25 163 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 TCTAP57738 103 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 TSPEAR-AS2P59090 65 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 HERVK_113P61574 105 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 REG3AQ06141 175 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 TMEM170BQ5T4T1 132 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 KRTAP26-1Q6PEX3 210 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 SLC25A34Q6PIV7 304 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 C2orf91Q6ZV80 131 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 LINC00469Q8N7U9 141 aa3.56□□□□□ -1.84
GGPS1-208ENST00000497327 GEMIN7Q9H840 131 aaKnown RBP3.56□□□□□ -1.84
GGPS1-208ENST00000497327 A0A087WZ39 114 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 TRAV8-3A0A0A6YYJ7 113 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 MYMXA0A1B0GTQ4 84 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 NUPR2A6NF83 97 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 H3BRM9 83 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 J3QQQ9 107 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 SIVA1O15304 175 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 IGHV3-30P01768 117 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 IGHV3-33P01772 117 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 ANGP03950 147 aaKnown RBP3.55□□□□□ -1.84
GGPS1-208ENST00000497327 IGHV3-30-3P0DP02 117 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 IGHV3-30-5P0DP03 117 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 NMUP48645 174 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 SS18Q15532 418 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 CD164L2Q6UWJ8 174 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 LINC01561Q8N1V8 128 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 CHCHD10Q8WYQ3 142 aaPredicted RBP3.55□□□□□ -1.84
GGPS1-208ENST00000497327 PLEKHB2Q96CS7 222 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 KLK12Q9UKR0 248 aa3.55□□□□□ -1.84
GGPS1-208ENST00000497327 TRAV8-4A0A0B4J246 113 aa3.54□□□□□ -1.84
GGPS1-208ENST00000497327 IGKV3OR2-268A0A0C4DH90 116 aa3.54□□□□□ -1.84
GGPS1-208ENST00000497327 IBA57-AS1B1ANH7 110 aa3.54□□□□□ -1.84
GGPS1-208ENST00000497327 SPINK8P0C7L1 97 aa3.54□□□□□ -1.84
GGPS1-208ENST00000497327 CCL18P55774 89 aa3.54□□□□□ -1.84
GGPS1-208ENST00000497327 ZFAND6Q6FIF0 208 aa3.54□□□□□ -1.84
GGPS1-208ENST00000497327 CLPSL2Q6UWE3 100 aa3.54□□□□□ -1.84
GGPS1-208ENST00000497327 C10orf126Q8N4M7 172 aa3.54□□□□□ -1.84
GGPS1-208ENST00000497327 HIGD1BQ9P298 99 aa3.54□□□□□ -1.84
GGPS1-208ENST00000497327 VPS13DQ5THJ4 4388 aa3.54□□□□□ -1.84
GGPS1-208ENST00000497327 IGHV3-64A0A075B6Q5 118 aa3.53□□□□□ -1.84
GGPS1-208ENST00000497327 LGALS3P17931 250 aaKnown RBP3.53□□□□□ -1.84
GGPS1-208ENST00000497327 XCL1P47992 114 aa3.53□□□□□ -1.84
GGPS1-208ENST00000497327 HNRNPA3P51991 378 aaKnown RBP3.53□□□□□ -1.84
GGPS1-208ENST00000497327 CTAG1AP78358 180 aa3.53□□□□□ -1.84
GGPS1-208ENST00000497327 MIAQ16674 131 aa3.53□□□□□ -1.84
GGPS1-208ENST00000497327 C5orf38Q86SI9 138 aa3.53□□□□□ -1.84
GGPS1-208ENST00000497327 UBE2WQ96B02 151 aa3.53□□□□□ -1.84
GGPS1-208ENST00000497327 ZNF625Q96I27 306 aaPredicted RBP3.53□□□□□ -1.84
GGPS1-208ENST00000497327 Q9H8V8 135 aa3.53□□□□□ -1.84
GGPS1-208ENST00000497327 KLK5Q9Y337 293 aaPredicted RBP3.53□□□□□ -1.84
GGPS1-208ENST00000497327 IGLV10-54A0A075B6I4 117 aa3.52□□□□□ -1.85
GGPS1-208ENST00000497327 ZNF815PA8K554 130 aa3.52□□□□□ -1.85
GGPS1-208ENST00000497327 NDUFA1O15239 70 aa3.52□□□□□ -1.85
GGPS1-208ENST00000497327 KIAA0087Q14695 138 aa3.52□□□□□ -1.85
GGPS1-208ENST00000497327 SNHG12Q9BXW3 62 aa3.52□□□□□ -1.85
GGPS1-208ENST00000497327 NDUFA12Q9UI09 145 aa3.52□□□□□ -1.85
GGPS1-208ENST00000497327 IGLV9-49A0A0B4J1Y8 123 aa3.51□□□□□ -1.85
GGPS1-208ENST00000497327 A0A0J9YXY3 114 aa3.51□□□□□ -1.85
GGPS1-208ENST00000497327 K7EP13 123 aa3.51□□□□□ -1.85
GGPS1-208ENST00000497327 COX7A2LO14548 114 aa3.51□□□□□ -1.85
GGPS1-208ENST00000497327 CRPP02741 224 aa3.51□□□□□ -1.85
GGPS1-208ENST00000497327 TAL2Q16559 108 aa3.51□□□□□ -1.85
GGPS1-208ENST00000497327 BVES-AS1Q5T3Y7 98 aa3.51□□□□□ -1.85
GGPS1-208ENST00000497327 MUC7Q8TAX7 377 aa3.51□□□□□ -1.85
GGPS1-208ENST00000497327 COX7B2Q8TF08 81 aa3.51□□□□□ -1.85
GGPS1-208ENST00000497327 SPANXB1Q9NS25 103 aaPredicted RBP3.51□□□□□ -1.85
GGPS1-208ENST00000497327 PLECQ15149 4684 aaKnown RBP3.51□□□□□ -1.85
GGPS1-208ENST00000497327 DNAH1Q9P2D7 4330 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms