RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 DNAL4O96015 105 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 ATP5J2P56134 94 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 SYNJ2BPP57105 145 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 BLCAPP62952 87 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 LY6EQ16553 131 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 C5orf38Q86SI9 138 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 LRRC75A-AS1Q8N1F1 130 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 C3orf22Q8N5N4 141 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 C11orf72Q8NBR9 251 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 LINC00526Q96FQ7 95 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 CDKN2A-AS1Q9UH64 79 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 LINC00527Q9UJ94 153 aa2.28□□□□□ -2.04
TRIM4-205ENST00000496896 SPTBN2O15020 2390 aa2.28□□□□□ -2.05
TRIM4-205ENST00000496896 SPENQ96T58 3664 aaKnown RBP2.28□□□□□ -2.05
TRIM4-205ENST00000496896 ZNF292O60281 2723 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 IGHV3-64A0A075B6Q5 118 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 TRBV10-3A0A0K0K1G6 114 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 FAM236AA0A1B0GUQ0 79 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 FAM236BA0A1B0GV22 79 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 TRBV6-4A0A1B0GX49 114 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 RBMY1BA6NDE4 496 aaKnown RBP2.27□□□□□ -2.05
TRIM4-205ENST00000496896 RBMY1EA6NEQ0 496 aaKnown RBP2.27□□□□□ -2.05
TRIM4-205ENST00000496896 JMJD7-PLA2G4BH0Y9G9 81 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 UBE2L6O14933 153 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 TGFAP01135 160 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 RBMY1DP0C7P1 496 aaKnown RBP2.27□□□□□ -2.05
TRIM4-205ENST00000496896 BAALC-AS2P0C853 105 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 RBMY1A1P0DJD3 496 aaKnown RBP2.27□□□□□ -2.05
TRIM4-205ENST00000496896 RBMY1CP0DJD4 496 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 CRYGAP11844 174 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 COX7CP15954 63 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 DEFB131AP59861 70 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 DEFB1P60022 68 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 HIST1H4AP62805 103 aaKnown RBP2.27□□□□□ -2.05
TRIM4-205ENST00000496896 Q6JHZ5 121 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 DYNLRB2Q8TF09 96 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 CLEC2BQ92478 149 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 OBSCN-AS1Q96MR7 158 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 LINC01587Q99440 93 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 TMEM243Q9BU79 118 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 CDC42SE2Q9NRR3 84 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 SS18L2Q9UHA2 77 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 CELSR3Q9NYQ7 3312 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 SPTA1P02549 2419 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 GVINP1Q7Z2Y8 2422 aa2.27□□□□□ -2.05
TRIM4-205ENST00000496896 ZZEF1O43149 2961 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 TTC28Q96AY4 2481 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 BSNQ9UPA5 3926 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.26□□□□□ -2.05
TRIM4-205ENST00000496896 IGKV2-29A2NJV5 120 aaPredicted RBP2.26□□□□□ -2.05
TRIM4-205ENST00000496896 NDUFC2-KCTD14E9PQ53 114 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 F5H768 121 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 CCDC179H3BU77 68 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 J3KT08 172 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 NDUFC2O95298 119 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 PDE6GP18545 87 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 TMEM258P61165 79 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 RPL18AQ02543 176 aaKnown RBP2.26□□□□□ -2.05
TRIM4-205ENST00000496896 COX17Q14061 63 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 RBMY1FQ15415 496 aaKnown RBP2.26□□□□□ -2.05
TRIM4-205ENST00000496896 DEFB114Q30KQ6 69 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 DEFB112Q30KQ8 113 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 C9orf153Q5TBE3 101 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 SMIM20Q8N5G0 67 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 COX7B2Q8TF08 81 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 CHCHD10Q8WYQ3 142 aaPredicted RBP2.26□□□□□ -2.05
TRIM4-205ENST00000496896 KLK5Q9Y337 293 aaPredicted RBP2.26□□□□□ -2.05
TRIM4-205ENST00000496896 ZFHX4Q86UP3 3567 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 LOC400499M0QZD8 3231 aa2.26□□□□□ -2.05
TRIM4-205ENST00000496896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.25□□□□□ -2.051e-13■■■□□ 14.6
TRIM4-205ENST00000496896 DOPEY2Q9Y3R5 2298 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 COL6A3P12111 3177 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 RIF1Q5UIP0 2472 aaKnown RBP2.25□□□□□ -2.05
TRIM4-205ENST00000496896 ABCA2Q9BZC7 2435 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 A0A096LNT2 108 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 TMEM256-PLSCR3K7ERE1 68 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 IGFL1Q6UW32 110 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 Q8IZM0 81 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 NRGNQ92686 78 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 SND1-IT1Q9HBX3 110 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 SPTBN1Q01082 2364 aaKnown RBP2.25□□□□□ -2.05
TRIM4-205ENST00000496896 COL6A6A6NMZ7 2263 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 HIVEP2P31629 2446 aa2.25□□□□□ -2.05
TRIM4-205ENST00000496896 WDFY4Q6ZS81 3184 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 MUC3AQ02505 3323 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 TRGV1A0A0A0MS02 117 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 TRBV6-8A0A0A6YYG3 113 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 IGHV3-73A0A0B4J1V6 119 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 IGHV3OR16-9A0A0B4J2B5 98 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 hADV29S1A0JD25 119 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 KNCNA6PVL3 124 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 C19orf84I3L1E1 186 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 CCKP06307 115 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 LINC00694P0DN24 101 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 HTN1P15515 57 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 COX6A2Q02221 97 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 MOBPQ13875 183 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
TRIM4-205ENST00000496896 CEMP1Q6PRD7 247 aaPredicted RBP2.24□□□□□ -2.05
TRIM4-205ENST00000496896 SOSTDC1Q6X4U4 206 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms