RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 PPIP5K1Q6PFW1 1433 aa1.93□□□□□ -2.1
SNX13-211ENST00000496855 EP300Q09472 2414 aaPredicted RBP1.93□□□□□ -2.1
SNX13-211ENST00000496855 TOGARAM1Q9Y4F4 1720 aa1.93□□□□□ -2.1
SNX13-211ENST00000496855 TRBV7-1A0A0A6YYK4 115 aa1.93□□□□□ -2.1
SNX13-211ENST00000496855 C5orf56Q8N8D9 126 aa1.93□□□□□ -2.1
SNX13-211ENST00000496855 LINC00208Q96KT6 92 aa1.93□□□□□ -2.1
SNX13-211ENST00000496855 CELSR1Q9NYQ6 3014 aa1.93□□□□□ -2.1
SNX13-211ENST00000496855 IGF2RP11717 2491 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 UBR4Q5T4S7 5183 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 CDC42BPAQ5VT25 1732 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 NBPF19A0A087WUL8 3843 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 CHD9Q3L8U1 2897 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 A0A087WTM6 91 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 IGLV3-32A0A0A0MS00 114 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 CCL3L1P16619 93 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 C10orf128Q5T292 105 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 Q5VV11 94 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 MED9Q9NWA0 146 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 A0A0G2JMZ2 1700 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 LAMA5O15230 3695 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 MED12Q93074 2177 aa1.92□□□□□ -2.1
SNX13-211ENST00000496855 FLNAP21333 2647 aaKnown RBP1.91□□□□□ -2.1
SNX13-211ENST00000496855 PRXQ9BXM0 1461 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 KDM3BQ7LBC6 1761 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 TRBV7-3A0A075B6L6 115 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 C4AP0C0L4 1744 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 SEC11AP67812 179 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 OTOGLQ3ZCN5 2332 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 GDF5OSQ5U4N7 250 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 UNQ6190/PRO20217Q6UXQ8 127 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 UBR3Q6ZT12 1888 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 ZNF563Q8TA94 476 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 BPESC1Q9GZL8 116 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 NRXN2Q9P2S2 1712 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 LRBAP50851 2863 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 GCC2Q8IWJ2 1684 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 LMO7Q8WWI1 1683 aa1.91□□□□□ -2.1
SNX13-211ENST00000496855 COL6A5A8TX70 2615 aa1.9□□□□□ -2.1
SNX13-211ENST00000496855 TRBV6-7A0A0A0MS04 114 aa1.9□□□□□ -2.11
SNX13-211ENST00000496855 C10orf142B7Z368 130 aa1.9□□□□□ -2.11
SNX13-211ENST00000496855 MYOZ3Q8TDC0 251 aa1.9□□□□□ -2.11
SNX13-211ENST00000496855 C20orf78Q9BR46 151 aa1.9□□□□□ -2.11
SNX13-211ENST00000496855 SNURFQ9Y675 71 aa1.9□□□□□ -2.11
SNX13-211ENST00000496855 CELSR2Q9HCU4 2923 aa1.9□□□□□ -2.11
SNX13-211ENST00000496855 E9PCH4 1651 aa1.89□□□□□ -2.11
SNX13-211ENST00000496855 RGPD8O14715 1765 aaPredicted RBP1.89□□□□□ -2.11
SNX13-211ENST00000496855 IFT172Q9UG01 1749 aa1.89□□□□□ -2.11
SNX13-211ENST00000496855 TECTAO75443 2155 aa1.89□□□□□ -2.11
SNX13-211ENST00000496855 MTORP42345 2549 aa1.89□□□□□ -2.11
SNX13-211ENST00000496855 SPENQ96T58 3664 aaKnown RBP1.89□□□□□ -2.11
SNX13-211ENST00000496855 DOPEY2Q9Y3R5 2298 aa1.89□□□□□ -2.11
SNX13-211ENST00000496855 PRRC2BQ5JSZ5 2229 aaKnown RBP1.89□□□□□ -2.11
SNX13-211ENST00000496855 IGKV2-40A0A087WW87 121 aaPredicted RBP1.88□□□□□ -2.11
SNX13-211ENST00000496855 TRAV22A0A0B4J277 110 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 TRBV7-7A0A0K0K1E9 115 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 IGKV2D-40P01614 121 aaPredicted RBP1.88□□□□□ -2.11
SNX13-211ENST00000496855 PRB1P04280 392 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 ELOF1P60002 83 aaKnown RBP1.88□□□□□ -2.11
SNX13-211ENST00000496855 ZNF56Q15929 161 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 TDRG1Q3Y452 100 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 XAF1Q6GPH4 301 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 COX7B2Q8TF08 81 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 SPTBP11277 2137 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 PLXNA1Q9UIW2 1896 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 CSMD1Q96PZ7 3565 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 DOCK11Q5JSL3 2073 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 ITPR2Q14571 2701 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 NAP1L6A6NFF2 107 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 CRYM-AS1A6NIL9 109 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 J3QKU1 62 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 NMBP08949 121 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 SSBP1Q04837 148 aaKnown RBP1.88□□□□□ -2.11
SNX13-211ENST00000496855 LCN9Q8WX39 176 aa1.88□□□□□ -2.11
SNX13-211ENST00000496855 UTP20O75691 2785 aaKnown RBP1.87□□□□□ -2.11
SNX13-211ENST00000496855 RYR1P21817 5038 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 C4BP0C0L5 1744 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 ABCC6O95255 1503 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 USP9YO00507 2555 aaPredicted RBP1.87□□□□□ -2.11
SNX13-211ENST00000496855 VWFP04275 2813 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 AKAP13Q12802 2813 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 RYR3Q15413 4870 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 BIRC6Q9NR09 4857 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 ADGRG4Q8IZF6 3080 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 UBE2D3P61077 147 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 UBE2D2P62837 147 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 NDUFA4L2Q9NRX3 87 aa1.87□□□□□ -2.11
SNX13-211ENST00000496855 NIPBLQ6KC79 2804 aaeCLIP1.86□□□□□ -2.11
SNX13-211ENST00000496855 BCORQ6W2J9 1755 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 MGAQ8IWI9 3026 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 MRC1P22897 1456 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 PSME4Q14997 1843 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 H3BQF6 201 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 K7EP34 96 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 SFT2D2O95562 160 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 ASIPP42127 132 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 EDDM3BP56851 147 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 FAM167A-AS1Q96KT0 104 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 MANBALQ9NQG1 85 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 OTOGQ6ZRI0 2925 aa1.86□□□□□ -2.11
SNX13-211ENST00000496855 F8P00451 2351 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms