RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 COX6A2Q02221 97 aa11.52□□□□□ -0.56
LMNA-216ENST00000496738 LINC00269Q8N2A0 174 aa11.52□□□□□ -0.56
LMNA-216ENST00000496738 HIST1H4GQ99525 98 aa11.52□□□□□ -0.56
LMNA-216ENST00000496738 IGHV3-64A0A075B6Q5 118 aa11.52□□□□□ -0.57
LMNA-216ENST00000496738 LINC00242Q5T6M2 205 aa11.52□□□□□ -0.57
LMNA-216ENST00000496738 C9orf153Q5TBE3 101 aa11.52□□□□□ -0.57
LMNA-216ENST00000496738 FBN3Q75N90 2809 aa11.52□□□□□ -0.57
LMNA-216ENST00000496738 MYMXA0A1B0GTQ4 84 aa11.51□□□□□ -0.57
LMNA-216ENST00000496738 SCGB1C2P0DMR2 95 aa11.51□□□□□ -0.57
LMNA-216ENST00000496738 TINCRA0A1B0GVN0 87 aa11.51□□□□□ -0.57
LMNA-216ENST00000496738 LINC00588Q9Y4M8 146 aa11.51□□□□□ -0.57
LMNA-216ENST00000496738 C3orf22Q8N5N4 141 aa11.5□□□□□ -0.57
LMNA-216ENST00000496738 KLK12Q9UKR0 248 aa11.5□□□□□ -0.57
LMNA-216ENST00000496738 C10orf126Q8N4M7 172 aa11.49□□□□□ -0.57
LMNA-216ENST00000496738 CDKN2A-AS1Q9UH64 79 aa11.49□□□□□ -0.57
LMNA-216ENST00000496738 LOC107984156A0A0G2JMH3 177 aa11.48□□□□□ -0.57
LMNA-216ENST00000496738 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
LMNA-216ENST00000496738 REG3AQ06141 175 aa11.48□□□□□ -0.57
LMNA-216ENST00000496738 ARL17AQ8IVW1 177 aa11.48□□□□□ -0.57
LMNA-216ENST00000496738 MAPKAPK5-AS1Q8N8E1 139 aa11.48□□□□□ -0.57
LMNA-216ENST00000496738 HERVK_113P61574 105 aa11.48□□□□□ -0.57
LMNA-216ENST00000496738 IGLV10-54A0A075B6I4 117 aa11.47□□□□□ -0.57
LMNA-216ENST00000496738 TMEM223A0PJW6 202 aa11.47□□□□□ -0.57
LMNA-216ENST00000496738 UQCRQO14949 82 aa11.47□□□□□ -0.57
LMNA-216ENST00000496738 TCL1BO95988 128 aa11.47□□□□□ -0.57
LMNA-216ENST00000496738 CCL18P55774 89 aa11.47□□□□□ -0.57
LMNA-216ENST00000496738 LINC00526Q96FQ7 95 aa11.47□□□□□ -0.57
LMNA-216ENST00000496738 TRAV8-3A0A0A6YYJ7 113 aa11.47□□□□□ -0.57
LMNA-216ENST00000496738 APLNQ9ULZ1 77 aa11.47□□□□□ -0.57
LMNA-216ENST00000496738 TRBV7-7A0A0K0K1E9 115 aa11.46□□□□□ -0.57
LMNA-216ENST00000496738 XCL1P47992 114 aa11.46□□□□□ -0.57
LMNA-216ENST00000496738 NUPR2A6NF83 97 aa11.46□□□□□ -0.58
LMNA-216ENST00000496738 FAM19A3Q7Z5A8 133 aa11.46□□□□□ -0.58
LMNA-216ENST00000496738 SEC61GP60059 68 aa11.45□□□□□ -0.58
LMNA-216ENST00000496738 SS18Q15532 418 aa11.45□□□□□ -0.58
LMNA-216ENST00000496738 KLK5Q9Y337 293 aaPredicted RBP11.45□□□□□ -0.58
LMNA-216ENST00000496738 TSPEAR-AS2P59090 65 aa11.44□□□□□ -0.58
LMNA-216ENST00000496738 IGLV5-45A0A087WSX0 123 aa11.44□□□□□ -0.58
LMNA-216ENST00000496738 SLC25A20O43772 301 aa11.44□□□□□ -0.58
LMNA-216ENST00000496738 UBE2WQ96B02 151 aa11.44□□□□□ -0.58
LMNA-216ENST00000496738 TRAV8-4A0A0B4J246 113 aa11.43□□□□□ -0.58
LMNA-216ENST00000496738 C4orf26Q17RF5 130 aa11.43□□□□□ -0.58
LMNA-216ENST00000496738 ENHOQ6UWT2 76 aa11.43□□□□□ -0.58
LMNA-216ENST00000496738 SPANXDQ9BXN6 97 aa11.43□□□□□ -0.58
LMNA-216ENST00000496738 ZNF815PA8K554 130 aa11.42□□□□□ -0.58
LMNA-216ENST00000496738 HRCT1Q6UXD1 115 aa11.42□□□□□ -0.58
LMNA-216ENST00000496738 C5orf38Q86SI9 138 aa11.42□□□□□ -0.58
LMNA-216ENST00000496738 CRPP02741 224 aa11.41□□□□□ -0.58
LMNA-216ENST00000496738 LINC01556Q5JQF7 62 aa11.41□□□□□ -0.58
LMNA-216ENST00000496738 CHCHD10Q8WYQ3 142 aaPredicted RBP11.41□□□□□ -0.58
LMNA-216ENST00000496738 CSMD3Q7Z407 3707 aa11.41□□□□□ -0.58
LMNA-216ENST00000496738 RPL13AP40429 203 aaKnown RBP11.41□□□□□ -0.58
LMNA-216ENST00000496738 Q5XG85 94 aa11.41□□□□□ -0.58
LMNA-216ENST00000496738 SFTA2Q6UW10 78 aa11.41□□□□□ -0.58
LMNA-216ENST00000496738 UBE2DNLQ8IWF7 75 aa11.41□□□□□ -0.58
LMNA-216ENST00000496738 PRR34Q9NV39 138 aa11.41□□□□□ -0.58
LMNA-216ENST00000496738 PRO0628Q9UI54 55 aa11.41□□□□□ -0.58
LMNA-216ENST00000496738 IGHV3OR16-9A0A0B4J2B5 98 aa11.4□□□□□ -0.58
LMNA-216ENST00000496738 J3QQQ9 107 aa11.4□□□□□ -0.58
LMNA-216ENST00000496738 LEPROTO15243 131 aa11.4□□□□□ -0.58
LMNA-216ENST00000496738 DNAH10OSP0CZ25 163 aa11.4□□□□□ -0.58
LMNA-216ENST00000496738 MALP21145 153 aa11.4□□□□□ -0.58
LMNA-216ENST00000496738 LINC01600Q96MT4 127 aa11.4□□□□□ -0.58
LMNA-216ENST00000496738 IGHV1-58A0A0C4DH39 117 aa11.39□□□□□ -0.59
LMNA-216ENST00000496738 SMIM1B2RUZ4 78 aa11.39□□□□□ -0.59
LMNA-216ENST00000496738 LGALS3P17931 250 aaKnown RBP11.39□□□□□ -0.59
LMNA-216ENST00000496738 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
LMNA-216ENST00000496738 FAM236AA0A1B0GUQ0 79 aa11.38□□□□□ -0.59
LMNA-216ENST00000496738 FAM236BA0A1B0GV22 79 aa11.38□□□□□ -0.59
LMNA-216ENST00000496738 CRYGAP11844 174 aa11.38□□□□□ -0.59
LMNA-216ENST00000496738 SCGB1D4Q6XE38 83 aa11.38□□□□□ -0.59
LMNA-216ENST00000496738 GAGE2AQ6NT46 116 aa11.37□□□□□ -0.59
LMNA-216ENST00000496738 NTN5Q8WTR8 489 aaPredicted RBP11.37□□□□□ -0.59
LMNA-216ENST00000496738 PLEKHB2Q96CS7 222 aa11.37□□□□□ -0.59
LMNA-216ENST00000496738 Q9H8V8 135 aa11.37□□□□□ -0.59
LMNA-216ENST00000496738 DPH3Q96FX2 82 aa11.37□□□□□ -0.59
LMNA-216ENST00000496738 UPK3BQ9BT76 320 aa11.37□□□□□ -0.59
LMNA-216ENST00000496738 Q9HAA7 133 aa11.37□□□□□ -0.59
LMNA-216ENST00000496738 FAM240AA0A1B0GVK7 77 aa11.36□□□□□ -0.59
LMNA-216ENST00000496738 CD164L2Q6UWJ8 174 aa11.36□□□□□ -0.59
LMNA-216ENST00000496738 MUC7Q8TAX7 377 aa11.36□□□□□ -0.59
LMNA-216ENST00000496738 A0A087WZ39 114 aa11.35□□□□□ -0.59
LMNA-216ENST00000496738 TGP01266 2768 aa11.35□□□□□ -0.59
LMNA-216ENST00000496738 TOMM7Q9P0U1 55 aa11.35□□□□□ -0.59
LMNA-216ENST00000496738 IGLV5-39A0A0G2JS06 123 aa11.35□□□□□ -0.59
LMNA-216ENST00000496738 MIAQ16674 131 aa11.34□□□□□ -0.59
LMNA-216ENST00000496738 STARD9Q9P2P6 4700 aa11.34□□□□□ -0.59
LMNA-216ENST00000496738 DNAH7Q8WXX0 4024 aa11.33□□□□□ -0.6
LMNA-216ENST00000496738 TEX49A0A1B0GTD5 131 aa11.33□□□□□ -0.6
LMNA-216ENST00000496738 COX7A2LO14548 114 aa11.33□□□□□ -0.6
LMNA-216ENST00000496738 OXTP01178 125 aa11.33□□□□□ -0.6
LMNA-216ENST00000496738 COX7CP15954 63 aa11.33□□□□□ -0.6
LMNA-216ENST00000496738 LYSTQ99698 3801 aa11.33□□□□□ -0.6
LMNA-216ENST00000496738 SRSF9Q13242 221 aaKnown RBP eCLIP11.33□□□□□ -0.6
LMNA-216ENST00000496738 IGKV2D-24A0A075B6R9 120 aa11.32□□□□□ -0.6
LMNA-216ENST00000496738 NDUFA12Q9UI09 145 aa11.32□□□□□ -0.6
LMNA-216ENST00000496738 TMEM258P61165 79 aa11.31□□□□□ -0.6
LMNA-216ENST00000496738 C1orf43Q9BWL3 253 aa11.31□□□□□ -0.6
LMNA-216ENST00000496738 DYNC2H1Q8NCM8 4307 aaKnown RBP11.31□□□□□ -0.6
LMNA-216ENST00000496738 COX7B2Q8TF08 81 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms