RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 MT-ND6P03923 174 aa7.55□□□□□ -1.2
CLDN12-213ENST00000496677 G0S2P27469 103 aa7.55□□□□□ -1.2
CLDN12-213ENST00000496677 GAGE2EQ4V326 116 aa7.55□□□□□ -1.2
CLDN12-213ENST00000496677 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
CLDN12-213ENST00000496677 ERASQ7Z444 233 aa7.55□□□□□ -1.2
CLDN12-213ENST00000496677 GAGE2DQ9UEU5 116 aa7.55□□□□□ -1.2
CLDN12-213ENST00000496677 CDKN2A-AS1Q9UH64 79 aa7.55□□□□□ -1.2
CLDN12-213ENST00000496677 C1orf137Q5JT78 98 aa7.54□□□□□ -1.2
CLDN12-213ENST00000496677 PAPPA-AS1Q5QFB9 102 aa7.54□□□□□ -1.2
CLDN12-213ENST00000496677 Q8IZM0 81 aa7.54□□□□□ -1.2
CLDN12-213ENST00000496677 IGLV7-43P04211 117 aa7.53□□□□□ -1.2
CLDN12-213ENST00000496677 HERVK_113P63121 156 aa7.53□□□□□ -1.2
CLDN12-213ENST00000496677 FAM19A5Q7Z5A7 132 aaPredicted RBP7.53□□□□□ -1.2
CLDN12-213ENST00000496677 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
CLDN12-213ENST00000496677 PACRGQ96M98 296 aaPredicted RBP7.53□□□□□ -1.2
CLDN12-213ENST00000496677 S100PP25815 95 aa7.52□□□□□ -1.21
CLDN12-213ENST00000496677 SEC11AP67812 179 aa7.52□□□□□ -1.21
CLDN12-213ENST00000496677 C6orf226Q5I0X4 101 aa7.52□□□□□ -1.21
CLDN12-213ENST00000496677 SCGB3A1Q96QR1 104 aa7.52□□□□□ -1.21
CLDN12-213ENST00000496677 CARHSP1Q9Y2V2 147 aaKnown RBP7.52□□□□□ -1.21
CLDN12-213ENST00000496677 UBR4Q5T4S7 5183 aa7.52□□□□□ -1.21
CLDN12-213ENST00000496677 IGLV5-45A0A087WSX0 123 aa7.51□□□□□ -1.21
CLDN12-213ENST00000496677 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
CLDN12-213ENST00000496677 PRSS2P07478 247 aa7.51□□□□□ -1.21
CLDN12-213ENST00000496677 COX19Q49B96 90 aa7.51□□□□□ -1.21
CLDN12-213ENST00000496677 GEMIN7Q9H840 131 aaKnown RBP7.51□□□□□ -1.21
CLDN12-213ENST00000496677 TOMM7Q9P0U1 55 aa7.51□□□□□ -1.21
CLDN12-213ENST00000496677 TINCRA0A1B0GVN0 87 aa7.5□□□□□ -1.21
CLDN12-213ENST00000496677 M0QXV9 152 aa7.5□□□□□ -1.21
CLDN12-213ENST00000496677 CKS1BP61024 79 aa7.5□□□□□ -1.21
CLDN12-213ENST00000496677 KRTAP4-8Q9BYQ9 185 aa7.5□□□□□ -1.21
CLDN12-213ENST00000496677 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
CLDN12-213ENST00000496677 LINC01549A6NIU2 74 aa7.49□□□□□ -1.21
CLDN12-213ENST00000496677 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
CLDN12-213ENST00000496677 F8VRH5 84 aa7.49□□□□□ -1.21
CLDN12-213ENST00000496677 RHEBQ15382 184 aa7.49□□□□□ -1.21
CLDN12-213ENST00000496677 DIRC1Q969H9 104 aa7.49□□□□□ -1.21
CLDN12-213ENST00000496677 H0Y9J4 135 aa7.48□□□□□ -1.21
CLDN12-213ENST00000496677 FABP9Q0Z7S8 132 aa7.48□□□□□ -1.21
CLDN12-213ENST00000496677 PDZD11Q5EBL8 140 aa7.48□□□□□ -1.21
CLDN12-213ENST00000496677 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
CLDN12-213ENST00000496677 URB1-AS1Q96HZ7 61 aa7.48□□□□□ -1.21
CLDN12-213ENST00000496677 RPS10P5Q9NQ39 176 aa7.48□□□□□ -1.21
CLDN12-213ENST00000496677 LRP2P98164 4655 aa7.47□□□□□ -1.21
CLDN12-213ENST00000496677 A0A096LNJ9 63 aa7.47□□□□□ -1.21
CLDN12-213ENST00000496677 KRTAP1-4P0C5Y4 121 aa7.47□□□□□ -1.21
CLDN12-213ENST00000496677 PMVKQ15126 192 aa7.47□□□□□ -1.21
CLDN12-213ENST00000496677 XAGE1AQ9HD64 81 aa7.47□□□□□ -1.21
CLDN12-213ENST00000496677 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
CLDN12-213ENST00000496677 CXCL5P42830 114 aa7.46□□□□□ -1.22
CLDN12-213ENST00000496677 UBE2BP63146 152 aa7.45□□□□□ -1.22
CLDN12-213ENST00000496677 FA2HQ7L5A8 372 aa7.45□□□□□ -1.22
CLDN12-213ENST00000496677 PRR26Q8N8Z3 221 aa7.45□□□□□ -1.22
CLDN12-213ENST00000496677 COX7B2Q8TF08 81 aa7.45□□□□□ -1.22
CLDN12-213ENST00000496677 C18orf32Q8TCD1 76 aa7.44□□□□□ -1.22
CLDN12-213ENST00000496677 TP73-AS1Q9UF72 201 aa7.44□□□□□ -1.22
CLDN12-213ENST00000496677 SPINK8P0C7L1 97 aa7.43□□□□□ -1.22
CLDN12-213ENST00000496677 LINC00614P0C842 121 aa7.43□□□□□ -1.22
CLDN12-213ENST00000496677 IGLC3P0DOY3 106 aa7.43□□□□□ -1.22
CLDN12-213ENST00000496677 SMCO4Q9NRQ5 59 aa7.43□□□□□ -1.22
CLDN12-213ENST00000496677 IGLV5-39A0A0G2JS06 123 aa7.42□□□□□ -1.22
CLDN12-213ENST00000496677 ZNF861PO60384 105 aa7.42□□□□□ -1.22
CLDN12-213ENST00000496677 LBHQ53QV2 105 aaPredicted RBP7.42□□□□□ -1.22
CLDN12-213ENST00000496677 TRAPPC1Q9Y5R8 145 aa7.42□□□□□ -1.22
CLDN12-213ENST00000496677 IGLV1-50A0A075B6I6 118 aa7.41□□□□□ -1.22
CLDN12-213ENST00000496677 NUPR1O60356 82 aa7.41□□□□□ -1.22
CLDN12-213ENST00000496677 MRPL55Q7Z7F7 128 aaKnown RBP7.41□□□□□ -1.22
CLDN12-213ENST00000496677 YPEL4Q96NS1 127 aa7.41□□□□□ -1.22
CLDN12-213ENST00000496677 IGLV5-37A0A075B6J1 123 aa7.4□□□□□ -1.22
CLDN12-213ENST00000496677 APOC3P02656 99 aa7.4□□□□□ -1.22
CLDN12-213ENST00000496677 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.22
CLDN12-213ENST00000496677 H3BRM9 83 aa7.39□□□□□ -1.23
CLDN12-213ENST00000496677 HBDP02042 147 aa7.39□□□□□ -1.23
CLDN12-213ENST00000496677 PMCHL1Q16048 86 aa7.39□□□□□ -1.23
CLDN12-213ENST00000496677 LINC00167Q96N53 147 aa7.39□□□□□ -1.23
CLDN12-213ENST00000496677 RAB5BP61020 215 aa7.38□□□□□ -1.23
CLDN12-213ENST00000496677 SVBPQ8N300 66 aa7.38□□□□□ -1.23
CLDN12-213ENST00000496677 BCE1O60756 84 aa7.37□□□□□ -1.23
CLDN12-213ENST00000496677 SNAPINO95295 136 aa7.37□□□□□ -1.23
CLDN12-213ENST00000496677 NDUFA6P56556 154 aa7.37□□□□□ -1.23
CLDN12-213ENST00000496677 C11orf86A6NJI1 115 aa7.36□□□□□ -1.23
CLDN12-213ENST00000496677 RPL37AP8A6NKH3 93 aa7.36□□□□□ -1.23
CLDN12-213ENST00000496677 ATP5LO75964 103 aa7.36□□□□□ -1.23
CLDN12-213ENST00000496677 BAGE3Q86Y29 109 aa7.35□□□□□ -1.23
CLDN12-213ENST00000496677 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
CLDN12-213ENST00000496677 GAGE10A6NGK3 116 aa7.34□□□□□ -1.23
CLDN12-213ENST00000496677 RPL13AP40429 203 aaKnown RBP7.34□□□□□ -1.23
CLDN12-213ENST00000496677 RPL28P46779 137 aaKnown RBP7.34□□□□□ -1.23
CLDN12-213ENST00000496677 ZNF625Q96I27 306 aaPredicted RBP7.34□□□□□ -1.23
CLDN12-213ENST00000496677 SND1-IT1Q9HBX3 110 aa7.34□□□□□ -1.23
CLDN12-213ENST00000496677 SCO1O75880 301 aa7.33□□□□□ -1.24
CLDN12-213ENST00000496677 VPREB1P12018 145 aa7.33□□□□□ -1.24
CLDN12-213ENST00000496677 PFN2P35080 140 aa7.33□□□□□ -1.24
CLDN12-213ENST00000496677 COX17Q14061 63 aa7.33□□□□□ -1.24
CLDN12-213ENST00000496677 NDUFA5Q16718 116 aa7.33□□□□□ -1.24
CLDN12-213ENST00000496677 Q8NDZ9 215 aa7.33□□□□□ -1.24
CLDN12-213ENST00000496677 ERG28Q9UKR5 140 aa7.33□□□□□ -1.24
CLDN12-213ENST00000496677 CHCHD1Q96BP2 118 aaKnown RBP7.32□□□□□ -1.24
CLDN12-213ENST00000496677 RNF213Q63HN8 5207 aa7.32□□□□□ -1.24
CLDN12-213ENST00000496677 A0A087X002 238 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms