RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 A0A096LNJ9 63 aa4.43□□□□□ -1.7
SSBP1-213ENST00000496622 MGPP08493 103 aa4.43□□□□□ -1.7
SSBP1-213ENST00000496622 DAD1P61803 113 aa4.43□□□□□ -1.7
SSBP1-213ENST00000496622 TMEM170BQ5T4T1 132 aa4.43□□□□□ -1.7
SSBP1-213ENST00000496622 LENEPQ9Y5L5 61 aa4.43□□□□□ -1.7
SSBP1-213ENST00000496622 MGAM2Q2M2H8 2515 aa4.43□□□□□ -1.7
SSBP1-213ENST00000496622 LINC00643Q86TS7 51 aa4.42□□□□□ -1.7
SSBP1-213ENST00000496622 Q8N1X5 172 aa4.42□□□□□ -1.7
SSBP1-213ENST00000496622 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
SSBP1-213ENST00000496622 IGHV1-58A0A0C4DH39 117 aa4.42□□□□□ -1.7
SSBP1-213ENST00000496622 F5H697 171 aa4.42□□□□□ -1.7
SSBP1-213ENST00000496622 ZNF876PQ49A33 203 aa4.42□□□□□ -1.7
SSBP1-213ENST00000496622 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
SSBP1-213ENST00000496622 IGHV3-16A0A0C4DH30 117 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 M0R378 163 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 MAPKAPK5-AS1Q8N8E1 139 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 NRACQ8N912 160 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 LINC01600Q96MT4 127 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 DKK2Q9UBU2 259 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 U3KQK5 164 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 HYDINQ4G0P3 5121 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 IGHV1OR15-1A0A075B7D0 117 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 CCKP06307 115 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 LYPD5Q6UWN5 251 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 FAM19A3Q7Z5A8 133 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 TIMM17AQ99595 171 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 OVOL2Q9BRP0 275 aa4.41□□□□□ -1.7
SSBP1-213ENST00000496622 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
SSBP1-213ENST00000496622 HERC2O95714 4834 aa4.4□□□□□ -1.7
SSBP1-213ENST00000496622 LGALS3P17931 250 aaKnown RBP4.4□□□□□ -1.7
SSBP1-213ENST00000496622 UBE2D1P51668 147 aa4.4□□□□□ -1.7
SSBP1-213ENST00000496622 LINC00315P59091 139 aa4.4□□□□□ -1.7
SSBP1-213ENST00000496622 FAM222AQ5U5X8 452 aa4.4□□□□□ -1.7
SSBP1-213ENST00000496622 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.7
SSBP1-213ENST00000496622 COPS9Q8WXC6 57 aa4.4□□□□□ -1.71
SSBP1-213ENST00000496622 IGHV4-4A0A075B6R2 117 aa4.39□□□□□ -1.71
SSBP1-213ENST00000496622 IGLV1-51P01701 117 aa4.39□□□□□ -1.71
SSBP1-213ENST00000496622 ACYP1P07311 99 aa4.39□□□□□ -1.71
SSBP1-213ENST00000496622 GIG44P09565 113 aaPredicted RBP4.39□□□□□ -1.71
SSBP1-213ENST00000496622 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
SSBP1-213ENST00000496622 KIF25-AS1Q9Y6Z4 181 aa4.39□□□□□ -1.71
SSBP1-213ENST00000496622 IGLV2-18A0A075B6J9 118 aa4.39□□□□□ -1.71
SSBP1-213ENST00000496622 TMEM256-PLSCR3K7ERE1 68 aa4.39□□□□□ -1.71
SSBP1-213ENST00000496622 ZNF73O43830 326 aaPredicted RBP4.39□□□□□ -1.71
SSBP1-213ENST00000496622 TRBV10-2A0A0K0K1G8 114 aa4.38□□□□□ -1.71
SSBP1-213ENST00000496622 IGHV3-53P01767 116 aa4.38□□□□□ -1.71
SSBP1-213ENST00000496622 MRPS36P82909 103 aaKnown RBP4.38□□□□□ -1.71
SSBP1-213ENST00000496622 DEFB121Q5J5C9 76 aa4.38□□□□□ -1.71
SSBP1-213ENST00000496622 SUMO4Q6EEV6 95 aa4.38□□□□□ -1.71
SSBP1-213ENST00000496622 Q8N8P6 123 aa4.38□□□□□ -1.71
SSBP1-213ENST00000496622 SUMO2P61956 95 aaKnown RBP4.38□□□□□ -1.71
SSBP1-213ENST00000496622 C2orf82Q6UX34 121 aa4.38□□□□□ -1.71
SSBP1-213ENST00000496622 SOSTDC1Q6X4U4 206 aa4.38□□□□□ -1.71
SSBP1-213ENST00000496622 NDUFA11Q86Y39 141 aa4.38□□□□□ -1.71
SSBP1-213ENST00000496622 TENM3Q9P273 2699 aa4.37□□□□□ -1.71
SSBP1-213ENST00000496622 UBR4Q5T4S7 5183 aa4.37□□□□□ -1.71
SSBP1-213ENST00000496622 LYRM9A8MSI8 78 aa4.37□□□□□ -1.71
SSBP1-213ENST00000496622 H7BZZ5 65 aa4.37□□□□□ -1.71
SSBP1-213ENST00000496622 HBDP02042 147 aa4.37□□□□□ -1.71
SSBP1-213ENST00000496622 RPL39P62891 51 aaKnown RBP4.37□□□□□ -1.71
SSBP1-213ENST00000496622 RHOHQ15669 191 aa4.37□□□□□ -1.71
SSBP1-213ENST00000496622 IFI27L1Q96BM0 104 aa4.37□□□□□ -1.71
SSBP1-213ENST00000496622 A8MUN3 132 aa4.37□□□□□ -1.71
SSBP1-213ENST00000496622 DEFB4AO15263 64 aa4.37□□□□□ -1.71
SSBP1-213ENST00000496622 C11orf72Q8NBR9 251 aa4.37□□□□□ -1.71
SSBP1-213ENST00000496622 IGHV3-38A0A0C4DH36 116 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 SDHAF1A6NFY7 115 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 PRSS1P07477 247 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 LAGE3Q14657 143 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 ATXN8Q156A1 80 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 KRTAP24-1Q3LI83 254 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 Q6ZTI0 123 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 C20orf197Q8N268 126 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 OPRPNQ99935 248 aaPredicted RBP4.36□□□□□ -1.71
SSBP1-213ENST00000496622 SMIM2Q9BVW6 85 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 TRGV1A0A0A0MS02 117 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 M0QY20 66 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 NXPH4O95158 308 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 XCL1P47992 114 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 NOP10Q9NPE3 64 aaKnown RBP4.36□□□□□ -1.71
SSBP1-213ENST00000496622 LINC00588Q9Y4M8 146 aa4.36□□□□□ -1.71
SSBP1-213ENST00000496622 TRBV27A0A0K0K1C4 114 aa4.35□□□□□ -1.71
SSBP1-213ENST00000496622 A8MTW9 85 aa4.35□□□□□ -1.71
SSBP1-213ENST00000496622 INSP01308 110 aa4.35□□□□□ -1.71
SSBP1-213ENST00000496622 FAM229BQ4G0N7 80 aa4.35□□□□□ -1.71
SSBP1-213ENST00000496622 SDIM1Q6ZPB5 146 aa4.35□□□□□ -1.71
SSBP1-213ENST00000496622 A0A0B4J2C4 111 aa4.34□□□□□ -1.71
SSBP1-213ENST00000496622 LST1O00453 97 aa4.34□□□□□ -1.72
SSBP1-213ENST00000496622 RNASE13Q5GAN3 156 aaKnown RBP4.34□□□□□ -1.72
SSBP1-213ENST00000496622 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.72
SSBP1-213ENST00000496622 SCGB1D4Q6XE38 83 aa4.34□□□□□ -1.72
SSBP1-213ENST00000496622 SLC25A29Q8N8R3 303 aa4.34□□□□□ -1.72
SSBP1-213ENST00000496622 RYR1P21817 5038 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 H7C423 109 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 NDUFS5O43920 106 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 SLPIP03973 132 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 CFC1BP0CG36 223 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 CFC1P0CG37 223 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 POLR2KP53803 58 aaKnown RBP4.33□□□□□ -1.72
SSBP1-213ENST00000496622 CSNK1G2-AS1Q8NCQ2 148 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms