RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 IGHV3OR16-9A0A0B4J2B5 98 aa9.17□□□□□ -0.94
CXCL12-208ENST00000496375 CIRBPQ14011 172 aaKnown RBP9.17□□□□□ -0.94
CXCL12-208ENST00000496375 SPATA45Q537H7 98 aa9.17□□□□□ -0.94
CXCL12-208ENST00000496375 PAPPA-AS1Q5QFB9 102 aa9.17□□□□□ -0.94
CXCL12-208ENST00000496375 IGHV1-58A0A0C4DH39 117 aa9.16□□□□□ -0.94
CXCL12-208ENST00000496375 UBE2D1P51668 147 aa9.16□□□□□ -0.94
CXCL12-208ENST00000496375 Q6ZN92 141 aa9.16□□□□□ -0.94
CXCL12-208ENST00000496375 UQCR10Q9UDW1 63 aa9.16□□□□□ -0.94
CXCL12-208ENST00000496375 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.15□□□□□ -0.94
CXCL12-208ENST00000496375 M0R143 59 aa9.15□□□□□ -0.94
CXCL12-208ENST00000496375 COX7A2LO14548 114 aa9.15□□□□□ -0.94
CXCL12-208ENST00000496375 HBDP02042 147 aa9.15□□□□□ -0.94
CXCL12-208ENST00000496375 SLPIP03973 132 aa9.15□□□□□ -0.94
CXCL12-208ENST00000496375 LINC00242Q5T6M2 205 aa9.15□□□□□ -0.94
CXCL12-208ENST00000496375 C2orf88Q9BSF0 95 aa9.15□□□□□ -0.94
CXCL12-208ENST00000496375 PLA2G2DQ9UNK4 145 aa9.15□□□□□ -0.94
CXCL12-208ENST00000496375 TNXBP22105 4242 aa9.15□□□□□ -0.95
CXCL12-208ENST00000496375 HSBP1L1C9JCN9 74 aa9.14□□□□□ -0.95
CXCL12-208ENST00000496375 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
CXCL12-208ENST00000496375 LINC01545Q5VT33 79 aa9.14□□□□□ -0.95
CXCL12-208ENST00000496375 DPH3Q96FX2 82 aa9.14□□□□□ -0.95
CXCL12-208ENST00000496375 SCGB3A1Q96QR1 104 aa9.14□□□□□ -0.95
CXCL12-208ENST00000496375 VCX2Q9H322 139 aa9.14□□□□□ -0.95
CXCL12-208ENST00000496375 A0A087WYN8 130 aa9.13□□□□□ -0.95
CXCL12-208ENST00000496375 IGLC3P0DOY3 106 aa9.13□□□□□ -0.95
CXCL12-208ENST00000496375 LINC01561Q8N1V8 128 aa9.13□□□□□ -0.95
CXCL12-208ENST00000496375 A0A087WZ39 114 aa9.12□□□□□ -0.95
CXCL12-208ENST00000496375 SPACA4Q8TDM5 124 aa9.12□□□□□ -0.95
CXCL12-208ENST00000496375 APOMO95445 188 aa9.11□□□□□ -0.95
CXCL12-208ENST00000496375 SEC11AP67812 179 aa9.11□□□□□ -0.95
CXCL12-208ENST00000496375 HIGD2BQ4VC39 106 aa9.11□□□□□ -0.95
CXCL12-208ENST00000496375 ZC2HC1BQ5TFG8 222 aa9.11□□□□□ -0.95
CXCL12-208ENST00000496375 IFI27L1Q96BM0 104 aa9.11□□□□□ -0.95
CXCL12-208ENST00000496375 MT1HL1P0DM35 61 aa9.1□□□□□ -0.95
CXCL12-208ENST00000496375 MALP21145 153 aa9.1□□□□□ -0.95
CXCL12-208ENST00000496375 COX6A2Q02221 97 aa9.1□□□□□ -0.95
CXCL12-208ENST00000496375 Q6ZRU5 148 aa9.1□□□□□ -0.95
CXCL12-208ENST00000496375 C5orf38Q86SI9 138 aa9.1□□□□□ -0.95
CXCL12-208ENST00000496375 ATOH7Q8N100 152 aa9.1□□□□□ -0.95
CXCL12-208ENST00000496375 C2orf48Q96LS8 159 aa9.1□□□□□ -0.95
CXCL12-208ENST00000496375 F8WDY8 70 aa9.09□□□□□ -0.95
CXCL12-208ENST00000496375 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.09□□□□□ -0.95
CXCL12-208ENST00000496375 ATP5LO75964 103 aa9.09□□□□□ -0.95
CXCL12-208ENST00000496375 PLAC8Q9NZF1 115 aa9.09□□□□□ -0.95
CXCL12-208ENST00000496375 IGLV5-45A0A087WSX0 123 aa9.08□□□□□ -0.96
CXCL12-208ENST00000496375 HERVK_113P63121 156 aa9.08□□□□□ -0.96
CXCL12-208ENST00000496375 PMVKQ15126 192 aa9.08□□□□□ -0.96
CXCL12-208ENST00000496375 PMCHL2Q9BQD1 86 aa9.08□□□□□ -0.96
CXCL12-208ENST00000496375 SNHG12Q9BXW3 62 aa9.08□□□□□ -0.96
CXCL12-208ENST00000496375 CST9LQ9H4G1 147 aa9.08□□□□□ -0.96
CXCL12-208ENST00000496375 TINCRA0A1B0GVN0 87 aa9.07□□□□□ -0.96
CXCL12-208ENST00000496375 ZNF561-AS1K7EIQ3 104 aa9.07□□□□□ -0.96
CXCL12-208ENST00000496375 IGLV4-69A0A075B6H9 119 aa9.06□□□□□ -0.96
CXCL12-208ENST00000496375 IGKV2-24A0A0C4DH68 120 aa9.06□□□□□ -0.96
CXCL12-208ENST00000496375 SPAG11BQ08648 103 aa9.06□□□□□ -0.96
CXCL12-208ENST00000496375 MAJINQ3KP22 176 aa9.06□□□□□ -0.96
CXCL12-208ENST00000496375 C7orf33Q8WU49 177 aa9.06□□□□□ -0.96
CXCL12-208ENST00000496375 A0A0J9YXV3 536 aa9.05□□□□□ -0.96
CXCL12-208ENST00000496375 H0Y8G0 127 aa9.05□□□□□ -0.96
CXCL12-208ENST00000496375 SYCNQ0VAF6 134 aa9.05□□□□□ -0.96
CXCL12-208ENST00000496375 KIAA0087Q14695 138 aa9.05□□□□□ -0.96
CXCL12-208ENST00000496375 SLC25A34Q6PIV7 304 aa9.05□□□□□ -0.96
CXCL12-208ENST00000496375 ORAOV1Q8WV07 137 aa9.05□□□□□ -0.96
CXCL12-208ENST00000496375 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
CXCL12-208ENST00000496375 CARD19Q96LW7 228 aa9.05□□□□□ -0.96
CXCL12-208ENST00000496375 RNF151Q2KHN1 245 aa9.04□□□□□ -0.96
CXCL12-208ENST00000496375 GEMIN7Q9H840 131 aaKnown RBP9.04□□□□□ -0.96
CXCL12-208ENST00000496375 CDKN2A-AS1Q9UH64 79 aa9.04□□□□□ -0.96
CXCL12-208ENST00000496375 PKIGQ9Y2B9 76 aa9.04□□□□□ -0.96
CXCL12-208ENST00000496375 STPG4Q8N801 248 aa9.03□□□□□ -0.96
CXCL12-208ENST00000496375 MRPL35Q9NZE8 188 aaKnown RBP9.03□□□□□ -0.96
CXCL12-208ENST00000496375 RNF213Q63HN8 5207 aa9.02□□□□□ -0.97
CXCL12-208ENST00000496375 A0A096LNI7 61 aa9.02□□□□□ -0.97
CXCL12-208ENST00000496375 TRAV12-1A0A0B4J245 112 aa9.02□□□□□ -0.97
CXCL12-208ENST00000496375 CAMK2N2Q96S95 79 aa9.02□□□□□ -0.97
CXCL12-208ENST00000496375 LRP2P98164 4655 aa9.01□□□□□ -0.97
CXCL12-208ENST00000496375 SMIM1B2RUZ4 78 aa9.01□□□□□ -0.97
CXCL12-208ENST00000496375 COX8AP10176 69 aa9.01□□□□□ -0.97
CXCL12-208ENST00000496375 COL5A1-AS1Q5SY13 56 aa9.01□□□□□ -0.97
CXCL12-208ENST00000496375 Q8IZM0 81 aa9.01□□□□□ -0.97
CXCL12-208ENST00000496375 A0A1B0GV90 55 aa9□□□□□ -0.97
CXCL12-208ENST00000496375 NDUFA1O15239 70 aa9□□□□□ -0.97
CXCL12-208ENST00000496375 PRR3P79522 188 aaKnown RBP9□□□□□ -0.97
CXCL12-208ENST00000496375 ODF1Q14990 250 aa9□□□□□ -0.97
CXCL12-208ENST00000496375 LINC00469Q8N7U9 141 aa9□□□□□ -0.97
CXCL12-208ENST00000496375 DLEU1O43261 78 aa8.99□□□□□ -0.97
CXCL12-208ENST00000496375 DPM2O94777 84 aa8.99□□□□□ -0.97
CXCL12-208ENST00000496375 TRBV30A0A0K0K1B3 111 aa8.98□□□□□ -0.97
CXCL12-208ENST00000496375 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
CXCL12-208ENST00000496375 IGKCP01834 107 aa8.98□□□□□ -0.97
CXCL12-208ENST00000496375 TLX1NBP0CAT3 122 aa8.98□□□□□ -0.97
CXCL12-208ENST00000496375 ZNF22P17026 224 aaPredicted RBP8.98□□□□□ -0.97
CXCL12-208ENST00000496375 LINC00474Q9P2X8 69 aa8.98□□□□□ -0.97
CXCL12-208ENST00000496375 IGLV5-39A0A0G2JS06 123 aa8.97□□□□□ -0.97
CXCL12-208ENST00000496375 H3BRM9 83 aa8.97□□□□□ -0.97
CXCL12-208ENST00000496375 PLNP26678 52 aa8.97□□□□□ -0.97
CXCL12-208ENST00000496375 CXCL5P42830 114 aa8.97□□□□□ -0.97
CXCL12-208ENST00000496375 C10orf25Q5T742 122 aa8.97□□□□□ -0.97
CXCL12-208ENST00000496375 UNQ6190/PRO20217Q6UXQ8 127 aa8.97□□□□□ -0.97
CXCL12-208ENST00000496375 C6orf48Q9UBA6 75 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms