RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 FXYD6Q9H0Q3 95 aa0.26□□□□□ -2.37
CLTC-208ENST00000496076 XRN1Q8IZH2 1706 aaKnown RBP0.26□□□□□ -2.37
CLTC-208ENST00000496076 USF3Q68DE3 2245 aa0.25□□□□□ -2.37
CLTC-208ENST00000496076 KNDC1Q76NI1 1749 aa0.25□□□□□ -2.37
CLTC-208ENST00000496076 MARF1Q9Y4F3 1742 aaKnown RBP0.25□□□□□ -2.37
CLTC-208ENST00000496076 NRXN1Q9ULB1 1477 aa0.25□□□□□ -2.37
CLTC-208ENST00000496076 CCNB3Q8WWL7 1395 aa0.25□□□□□ -2.37
CLTC-208ENST00000496076 H0Y9P7 68 aa0.25□□□□□ -2.37
CLTC-208ENST00000496076 ARMS2P0C7Q2 107 aa0.25□□□□□ -2.37
CLTC-208ENST00000496076 MAST4O15021 2626 aa0.25□□□□□ -2.37
CLTC-208ENST00000496076 SETBP1Q9Y6X0 1596 aa0.24□□□□□ -2.37
CLTC-208ENST00000496076 RAPGEF2Q9Y4G8 1499 aa0.24□□□□□ -2.37
CLTC-208ENST00000496076 K7EQZ3 153 aa0.24□□□□□ -2.37
CLTC-208ENST00000496076 SPRR1BP22528 89 aa0.24□□□□□ -2.37
CLTC-208ENST00000496076 UNC79Q9P2D8 2635 aa0.24□□□□□ -2.37
CLTC-208ENST00000496076 NCOR2Q9Y618 2525 aa0.23□□□□□ -2.37
CLTC-208ENST00000496076 TRBV7-7A0A0K0K1E9 115 aa0.23□□□□□ -2.37
CLTC-208ENST00000496076 AKAP12Q02952 1782 aa0.23□□□□□ -2.37
CLTC-208ENST00000496076 ZFHX3Q15911 3703 aa0.23□□□□□ -2.37
CLTC-208ENST00000496076 PTPRQQ9UMZ3 2332 aa0.22□□□□□ -2.37
CLTC-208ENST00000496076 ETDBQ3ZM63 59 aa0.22□□□□□ -2.37
CLTC-208ENST00000496076 ZNF720Q7Z2F6 126 aa0.22□□□□□ -2.37
CLTC-208ENST00000496076 PSENENQ9NZ42 101 aa0.22□□□□□ -2.37
CLTC-208ENST00000496076 GOLGA4Q13439 2230 aaKnown RBP0.22□□□□□ -2.37
CLTC-208ENST00000496076 ANKRD26Q9UPS8 1709 aa0.21□□□□□ -2.38
CLTC-208ENST00000496076 F8WEM9 126 aa0.21□□□□□ -2.38
CLTC-208ENST00000496076 TSC2P49815 1807 aa0.21□□□□□ -2.38
CLTC-208ENST00000496076 AKAP6Q13023 2319 aa0.21□□□□□ -2.38
CLTC-208ENST00000496076 A0A0G2JMZ2 1700 aa0.21□□□□□ -2.38
CLTC-208ENST00000496076 LEPROTL1O95214 131 aa0.2□□□□□ -2.38
CLTC-208ENST00000496076 USMG5Q96IX5 58 aa0.2□□□□□ -2.38
CLTC-208ENST00000496076 Q9H521 79 aa0.2□□□□□ -2.38
CLTC-208ENST00000496076 CRIPTQ9P021 101 aa0.2□□□□□ -2.38
CLTC-208ENST00000496076 KIAA0556O60303 1618 aa0.2□□□□□ -2.38
CLTC-208ENST00000496076 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
CLTC-208ENST00000496076 PAPPA2Q9BXP8 1791 aa0.19□□□□□ -2.38
CLTC-208ENST00000496076 ABCC2Q92887 1545 aa0.19□□□□□ -2.38
CLTC-208ENST00000496076 PKDREJQ9NTG1 2253 aa0.19□□□□□ -2.38
CLTC-208ENST00000496076 D6R8Y8 96 aa0.19□□□□□ -2.38
CLTC-208ENST00000496076 MUSTN1Q8IVN3 82 aa0.19□□□□□ -2.38
CLTC-208ENST00000496076 HIGD1BQ9P298 99 aa0.19□□□□□ -2.38
CLTC-208ENST00000496076 CLTCQ00610 1675 aaKnown RBP0.18□□□□□ -2.38
CLTC-208ENST00000496076 TARBP1Q13395 1621 aaKnown RBP0.18□□□□□ -2.38
CLTC-208ENST00000496076 COX8AP10176 69 aa0.18□□□□□ -2.38
CLTC-208ENST00000496076 KLK9Q2XQG4 91 aa0.18□□□□□ -2.38
CLTC-208ENST00000496076 C20orf78Q9BR46 151 aa0.18□□□□□ -2.38
CLTC-208ENST00000496076 GYPAP02724 150 aa0.17□□□□□ -2.38
CLTC-208ENST00000496076 BAZ1AQ9NRL2 1556 aaPredicted RBP0.17□□□□□ -2.38
CLTC-208ENST00000496076 CELSR1Q9NYQ6 3014 aa0.17□□□□□ -2.38
CLTC-208ENST00000496076 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
CLTC-208ENST00000496076 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
CLTC-208ENST00000496076 HIVEP3Q5T1R4 2406 aa0.16□□□□□ -2.38
CLTC-208ENST00000496076 HMGN3Q15651 99 aa0.16□□□□□ -2.38
CLTC-208ENST00000496076 DEFB105AQ8NG35 78 aa0.16□□□□□ -2.38
CLTC-208ENST00000496076 APLNQ9ULZ1 77 aa0.16□□□□□ -2.38
CLTC-208ENST00000496076 DOPEY2Q9Y3R5 2298 aa0.16□□□□□ -2.38
CLTC-208ENST00000496076 WNK2Q9Y3S1 2297 aa0.16□□□□□ -2.38
CLTC-208ENST00000496076 MON2Q7Z3U7 1717 aa0.16□□□□□ -2.38
CLTC-208ENST00000496076 CSMD3Q7Z407 3707 aa0.15□□□□□ -2.38
CLTC-208ENST00000496076 SHPRHQ149N8 1683 aa0.15□□□□□ -2.39
CLTC-208ENST00000496076 EDC4Q6P2E9 1401 aaKnown RBP0.15□□□□□ -2.39
CLTC-208ENST00000496076 UBR5O95071 2799 aaPredicted RBP0.15□□□□□ -2.39
CLTC-208ENST00000496076 PIEZO2Q9H5I5 2752 aa0.15□□□□□ -2.39
CLTC-208ENST00000496076 DNAJC13O75165 2243 aa0.15□□□□□ -2.39
CLTC-208ENST00000496076 FMN2Q9NZ56 1722 aa0.15□□□□□ -2.39
CLTC-208ENST00000496076 C5P01031 1676 aa0.14□□□□□ -2.39
CLTC-208ENST00000496076 SLIT1O75093 1534 aa0.14□□□□□ -2.39
CLTC-208ENST00000496076 CPSF4LA6NMK7 179 aaKnown RBP0.14□□□□□ -2.39
CLTC-208ENST00000496076 ATP10BO94823 1461 aa0.14□□□□□ -2.39
CLTC-208ENST00000496076 CCDC141Q6ZP82 1450 aa0.14□□□□□ -2.39
CLTC-208ENST00000496076 SPTBN1Q01082 2364 aaKnown RBP0.13□□□□□ -2.39
CLTC-208ENST00000496076 CUX1P39880 1505 aa0.13□□□□□ -2.39
CLTC-208ENST00000496076 I3L3M4 83 aa0.13□□□□□ -2.39
CLTC-208ENST00000496076 IGLC2P0DOY2 106 aa0.13□□□□□ -2.39
CLTC-208ENST00000496076 IGLC3P0DOY3 106 aa0.13□□□□□ -2.39
CLTC-208ENST00000496076 PEA15Q15121 130 aa0.13□□□□□ -2.39
CLTC-208ENST00000496076 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
CLTC-208ENST00000496076 DMBT1Q9UGM3 2413 aaPredicted RBP0.13□□□□□ -2.39
CLTC-208ENST00000496076 EPRSP07814 1512 aaKnown RBP0.13□□□□□ -2.39
CLTC-208ENST00000496076 URB1O60287 2271 aaKnown RBP0.12□□□□□ -2.39
CLTC-208ENST00000496076 FANCAO15360 1455 aa0.12□□□□□ -2.39
CLTC-208ENST00000496076 LOC730098B7Z3J9 87 aa0.12□□□□□ -2.39
CLTC-208ENST00000496076 SPINK4O60575 86 aa0.12□□□□□ -2.39
CLTC-208ENST00000496076 PRM1P04553 51 aa0.12□□□□□ -2.39
CLTC-208ENST00000496076 SMIM11AP58511 58 aa0.12□□□□□ -2.39
CLTC-208ENST00000496076 ALKAL2Q6UX46 152 aa0.12□□□□□ -2.39
CLTC-208ENST00000496076 V9GYS6 101 aa0.12□□□□□ -2.39
CLTC-208ENST00000496076 ANKRD17O75179 2603 aaKnown RBP0.12□□□□□ -2.39
CLTC-208ENST00000496076 TROQ12816 1431 aaPredicted RBP0.11□□□□□ -2.39
CLTC-208ENST00000496076 SAMD9Q5K651 1589 aa0.11□□□□□ -2.39
CLTC-208ENST00000496076 NCOR1O75376 2440 aa0.11□□□□□ -2.39
CLTC-208ENST00000496076 FSIP2Q5CZC0 6907 aa0.1□□□□□ -2.39
CLTC-208ENST00000496076 HMGN2P05204 90 aaKnown RBP0.1□□□□□ -2.39
CLTC-208ENST00000496076 DEFB112Q30KQ8 113 aa0.1□□□□□ -2.39
CLTC-208ENST00000496076 ABCA2Q9BZC7 2435 aa0.1□□□□□ -2.39
CLTC-208ENST00000496076 ANKRD36A6QL64 1941 aa0.1□□□□□ -2.39
CLTC-208ENST00000496076 NKTRP30414 1462 aaKnown RBP0.1□□□□□ -2.39
CLTC-208ENST00000496076 GVINP1Q7Z2Y8 2422 aa0.09□□□□□ -2.39
CLTC-208ENST00000496076 CHD6Q8TD26 2715 aa0.09□□□□□ -2.39
CLTC-208ENST00000496076 VWFP04275 2813 aa0.09□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms