RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 CD164L2Q6UWJ8 174 aa5.96□□□□□ -1.46
EPHA4-213ENST00000495693 LINC00308Q8TCZ7 52 aa5.96□□□□□ -1.46
EPHA4-213ENST00000495693 WNK1Q9H4A3 2382 aa5.95□□□□□ -1.46
EPHA4-213ENST00000495693 FASNP49327 2511 aaKnown RBP5.95□□□□□ -1.46
EPHA4-213ENST00000495693 TRAV8-4A0A0B4J246 113 aa5.95□□□□□ -1.46
EPHA4-213ENST00000495693 COX7A2LO14548 114 aa5.95□□□□□ -1.46
EPHA4-213ENST00000495693 C6orf226Q5I0X4 101 aa5.95□□□□□ -1.46
EPHA4-213ENST00000495693 CFAP161Q6P656 301 aa5.95□□□□□ -1.46
EPHA4-213ENST00000495693 IGKV3OR2-268A0A0C4DH90 116 aa5.94□□□□□ -1.46
EPHA4-213ENST00000495693 ANGP03950 147 aaKnown RBP5.94□□□□□ -1.46
EPHA4-213ENST00000495693 CKS1BP61024 79 aa5.94□□□□□ -1.46
EPHA4-213ENST00000495693 REG3AQ06141 175 aa5.94□□□□□ -1.46
EPHA4-213ENST00000495693 ADAMTSL4-AS1Q5T5F5 129 aa5.94□□□□□ -1.46
EPHA4-213ENST00000495693 VPS25Q9BRG1 176 aa5.94□□□□□ -1.46
EPHA4-213ENST00000495693 TOMM7Q9P0U1 55 aa5.94□□□□□ -1.46
EPHA4-213ENST00000495693 MAP1AP78559 2803 aaPredicted RBP5.94□□□□□ -1.46
EPHA4-213ENST00000495693 G3V4G9 280 aa5.93□□□□□ -1.46
EPHA4-213ENST00000495693 H3BT86 120 aa5.93□□□□□ -1.46
EPHA4-213ENST00000495693 CRPP02741 224 aa5.93□□□□□ -1.46
EPHA4-213ENST00000495693 RPL13AP40429 203 aaKnown RBP5.93□□□□□ -1.46
EPHA4-213ENST00000495693 SPATA3Q8NHX4 192 aa5.93□□□□□ -1.46
EPHA4-213ENST00000495693 NTN5Q8WTR8 489 aaPredicted RBP5.93□□□□□ -1.46
EPHA4-213ENST00000495693 LINC01600Q96MT4 127 aa5.93□□□□□ -1.46
EPHA4-213ENST00000495693 CELA1Q9UNI1 258 aa5.93□□□□□ -1.46
EPHA4-213ENST00000495693 ACANP16112 2415 aa5.93□□□□□ -1.46
EPHA4-213ENST00000495693 DEFB4AO15263 64 aa5.92□□□□□ -1.46
EPHA4-213ENST00000495693 TCL1BO95988 128 aa5.92□□□□□ -1.46
EPHA4-213ENST00000495693 HTN3P15516 51 aa5.92□□□□□ -1.46
EPHA4-213ENST00000495693 XCL1P47992 114 aa5.92□□□□□ -1.46
EPHA4-213ENST00000495693 LINC00158P58513 81 aa5.92□□□□□ -1.46
EPHA4-213ENST00000495693 TEN1Q86WV5 123 aa5.92□□□□□ -1.46
EPHA4-213ENST00000495693 LINC00269Q8N2A0 174 aa5.92□□□□□ -1.46
EPHA4-213ENST00000495693 CARD19Q96LW7 228 aa5.92□□□□□ -1.46
EPHA4-213ENST00000495693 PRO0461Q9UI25 63 aa5.92□□□□□ -1.46
EPHA4-213ENST00000495693 ITPR2Q14571 2701 aa5.91□□□□□ -1.46
EPHA4-213ENST00000495693 A0A096LPF7 62 aa5.91□□□□□ -1.46
EPHA4-213ENST00000495693 F8WDY8 70 aa5.91□□□□□ -1.46
EPHA4-213ENST00000495693 H7C2G1 150 aa5.91□□□□□ -1.46
EPHA4-213ENST00000495693 SLC25A20O43772 301 aa5.91□□□□□ -1.46
EPHA4-213ENST00000495693 C5orf38Q86SI9 138 aa5.91□□□□□ -1.46
EPHA4-213ENST00000495693 PPDPFLQ8WWR9 84 aa5.91□□□□□ -1.46
EPHA4-213ENST00000495693 CHCHD10Q8WYQ3 142 aaPredicted RBP5.91□□□□□ -1.46
EPHA4-213ENST00000495693 TRBV10-2A0A0K0K1G8 114 aa5.9□□□□□ -1.46
EPHA4-213ENST00000495693 KRTAP10-11P60412 298 aa5.9□□□□□ -1.46
EPHA4-213ENST00000495693 WFDC2Q14508 124 aa5.9□□□□□ -1.46
EPHA4-213ENST00000495693 LINC01620Q4KN68 170 aa5.9□□□□□ -1.46
EPHA4-213ENST00000495693 MIR7-3HGQ8N6C7 128 aa5.9□□□□□ -1.46
EPHA4-213ENST00000495693 C15orf53Q8NAA6 179 aa5.9□□□□□ -1.46
EPHA4-213ENST00000495693 C11orf45Q8TAV5 145 aa5.9□□□□□ -1.46
EPHA4-213ENST00000495693 SND1-IT1Q9HBX3 110 aa5.9□□□□□ -1.46
EPHA4-213ENST00000495693 PRR34Q9NV39 138 aa5.9□□□□□ -1.46
EPHA4-213ENST00000495693 KLK5Q9Y337 293 aaPredicted RBP5.9□□□□□ -1.46
EPHA4-213ENST00000495693 FN1P02751 2386 aaKnown RBP5.89□□□□□ -1.47
EPHA4-213ENST00000495693 H0YGX0 51 aa5.89□□□□□ -1.47
EPHA4-213ENST00000495693 LST1O00453 97 aa5.89□□□□□ -1.47
EPHA4-213ENST00000495693 SNCGO76070 127 aa5.89□□□□□ -1.47
EPHA4-213ENST00000495693 NDUFC2O95298 119 aa5.89□□□□□ -1.47
EPHA4-213ENST00000495693 NPC2P61916 151 aa5.89□□□□□ -1.47
EPHA4-213ENST00000495693 ETDBQ3ZM63 59 aa5.89□□□□□ -1.47
EPHA4-213ENST00000495693 KPRPQ5T749 579 aaPredicted RBP5.89□□□□□ -1.47
EPHA4-213ENST00000495693 LYPD5Q6UWN5 251 aa5.89□□□□□ -1.47
EPHA4-213ENST00000495693 ANKRD29Q8N6D5 301 aa5.89□□□□□ -1.47
EPHA4-213ENST00000495693 MTORP42345 2549 aa5.88□□□□□ -1.47
EPHA4-213ENST00000495693 C9JAW5 83 aa5.88□□□□□ -1.47
EPHA4-213ENST00000495693 TRACP01848 142 aa5.88□□□□□ -1.47
EPHA4-213ENST00000495693 RPL28P46779 137 aaKnown RBP5.88□□□□□ -1.47
EPHA4-213ENST00000495693 DAND5Q8N907 189 aa5.88□□□□□ -1.47
EPHA4-213ENST00000495693 C2CD3Q4AC94 2353 aa5.88□□□□□ -1.47
EPHA4-213ENST00000495693 CUBNO60494 3623 aa5.88□□□□□ -1.47
EPHA4-213ENST00000495693 OTOGQ6ZRI0 2925 aa5.87□□□□□ -1.47
EPHA4-213ENST00000495693 TRAV10A0A0B4J240 114 aa5.87□□□□□ -1.47
EPHA4-213ENST00000495693 GCN1Q92616 2671 aaKnown RBP5.87□□□□□ -1.47
EPHA4-213ENST00000495693 DEFB131BA0A096LNP1 70 aa5.86□□□□□ -1.47
EPHA4-213ENST00000495693 GVQW2A0A096LPI5 108 aaPredicted RBP5.86□□□□□ -1.47
EPHA4-213ENST00000495693 A0A0U1RRA0 63 aa5.86□□□□□ -1.47
EPHA4-213ENST00000495693 A0A1B0GX51 115 aa5.86□□□□□ -1.47
EPHA4-213ENST00000495693 DNAL4O96015 105 aa5.86□□□□□ -1.47
EPHA4-213ENST00000495693 PFN2P35080 140 aa5.86□□□□□ -1.47
EPHA4-213ENST00000495693 SPAG11BQ08648 103 aa5.86□□□□□ -1.47
EPHA4-213ENST00000495693 CLPSL2Q6UWE3 100 aa5.86□□□□□ -1.47
EPHA4-213ENST00000495693 C2orf82Q6UX34 121 aa5.86□□□□□ -1.47
EPHA4-213ENST00000495693 NSD1Q96L73 2696 aaPredicted RBP5.85□□□□□ -1.47
EPHA4-213ENST00000495693 A0A0J9YWU9 116 aa5.85□□□□□ -1.47
EPHA4-213ENST00000495693 LINC01556Q5JQF7 62 aa5.85□□□□□ -1.47
EPHA4-213ENST00000495693 SOSTDC1Q6X4U4 206 aa5.85□□□□□ -1.47
EPHA4-213ENST00000495693 Q6ZTC4 211 aa5.85□□□□□ -1.47
EPHA4-213ENST00000495693 UBE2WQ96B02 151 aa5.85□□□□□ -1.47
EPHA4-213ENST00000495693 KLK12Q9UKR0 248 aa5.85□□□□□ -1.47
EPHA4-213ENST00000495693 SETXQ7Z333 2677 aaKnown RBP5.84□□□□□ -1.47
EPHA4-213ENST00000495693 CCL18P55774 89 aa5.84□□□□□ -1.47
EPHA4-213ENST00000495693 RMI2Q96E14 147 aa5.84□□□□□ -1.47
EPHA4-213ENST00000495693 TM2D3Q9BRN9 247 aa5.84□□□□□ -1.47
EPHA4-213ENST00000495693 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
EPHA4-213ENST00000495693 TMEM126AQ9H061 195 aa5.84□□□□□ -1.47
EPHA4-213ENST00000495693 HECTD1Q9ULT8 2610 aa5.84□□□□□ -1.47
EPHA4-213ENST00000495693 NOTCH2Q04721 2471 aa5.83□□□□□ -1.48
EPHA4-213ENST00000495693 H3BQ85 93 aa5.83□□□□□ -1.48
EPHA4-213ENST00000495693 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
EPHA4-213ENST00000495693 KIAA0087Q14695 138 aa5.83□□□□□ -1.48
EPHA4-213ENST00000495693 C2orf48Q96LS8 159 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms