RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 IGF1P05019 195 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 HOXD3P31249 432 aaPredicted RBP1.93□□□□□ -2.1
MDC1-208ENST00000494654 DAD1P61803 113 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 UBE2BP63146 152 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 ECSCRQ19T08 205 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 Q1T7F1 81 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 DEFB109BQ30KR1 87 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 C9orf66Q5T8R8 295 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 MINOS1Q5TGZ0 78 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 CLEC19AQ6UXS0 136 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 UNQ9165/PRO28630Q6UXU0 137 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 Q6ZQT0 140 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 MRPL55Q7Z7F7 128 aaKnown RBP1.93□□□□□ -2.1
MDC1-208ENST00000494654 KTN1-AS1Q86SY8 53 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 Q8N9W7 124 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 C11orf72Q8NBR9 251 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 WFDC9Q8NEX5 89 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 TMEM254Q8TBM7 123 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 CCL17Q92583 94 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 Q96MF0 132 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 LINC00467Q9BRT7 94 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 SND1-IT1Q9HBX3 110 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 SNURFQ9Y675 71 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 MINOS1-NBL1R4GNA1 71 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 ADGRG4Q8IZF6 3080 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 OTOGQ6ZRI0 2925 aa1.93□□□□□ -2.1
MDC1-208ENST00000494654 ABCA4P78363 2273 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 CR1P17927 2039 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.92□□□□□ -2.1
MDC1-208ENST00000494654 IGHV3OR16-13A0A075B7E8 117 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 IGHV3-74A0A0B4J1X5 117 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 IGHV3-35A0A0C4DH35 117 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 TRBV6-4A0A1B0GX49 114 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 hDV103S1A0JD37 113 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 TMEM89A2RUT3 159 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 LYRM9A8MSI8 78 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 H3BQ85 93 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 H3BUA1 57 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 TMEM256-PLSCR3K7ERE1 68 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 PDE6GP18545 87 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 FUSP35637 526 aaKnown RBP eCLIP1.92□□□□□ -2.1
MDC1-208ENST00000494654 LINC01547P58512 204 aaPredicted RBP1.92□□□□□ -2.1
MDC1-208ENST00000494654 RNASE13Q5GAN3 156 aaKnown RBP1.92□□□□□ -2.1
MDC1-208ENST00000494654 LINC00242Q5T6M2 205 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 SEM1Q6ZVN7 128 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 Q6ZVQ6 151 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 C6orf223Q8N319 242 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 Q8NA96 180 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 LINC01560Q8TB33 94 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 RETNQ9HD89 108 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 TLN1Q9Y490 2541 aaKnown RBP1.92□□□□□ -2.1
MDC1-208ENST00000494654 AKAP9Q99996 3911 aa1.92□□□□□ -2.1
MDC1-208ENST00000494654 IGHV3OR16-12A0A075B7B8 117 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 IGHV3-49A0A0A0MS15 119 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 A8MTW9 85 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 K7EQG2 157 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 IGHV3-53P01767 116 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 SLPIP03973 132 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 CCL18P55774 89 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 KRTAP10-9P60411 292 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 BSPH1Q075Z2 132 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 DEFB114Q30KQ6 69 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.91□□□□□ -2.1
MDC1-208ENST00000494654 C11orf44Q8N8P7 122 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 COX7B2Q8TF08 81 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 DEFB104AQ8WTQ1 72 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 SMR3AQ99954 134 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 TM2D3Q9BRN9 247 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 BPESC1Q9GZL8 116 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 FAM215AQ9Y5M1 114 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 PDZD2O15018 2839 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 HIVEP1P15822 2718 aa1.91□□□□□ -2.1
MDC1-208ENST00000494654 TRAV10A0A0B4J240 114 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 IGHV3-38A0A0C4DH36 116 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 TRBV10-1A0A0K0K1A3 114 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 LCE6AA0A183 80 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 K7EQD1 137 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 NDUFS5O43920 106 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 IGHV4-31P0DP07 118 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 IGHV4-38-2P0DP08 117 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 DEFB1P60022 68 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 LMO4P61968 165 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 RPL36AP83881 106 aaKnown RBP1.9□□□□□ -2.11
MDC1-208ENST00000494654 COX6A2Q02221 97 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 PRB3Q04118 309 aaPredicted RBP1.9□□□□□ -2.11
MDC1-208ENST00000494654 Q6ZRP5 223 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 Q6ZTC4 211 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 Q8N814 137 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 C5orf56Q8N8D9 126 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 MPLKIPQ8TAP9 179 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 RPL36ALQ969Q0 106 aaKnown RBP1.9□□□□□ -2.11
MDC1-208ENST00000494654 OCR1Q9BZK8 76 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 CYP4F30PQ9H0H9 118 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 PCNX1Q96RV3 2341 aa1.9□□□□□ -2.11
MDC1-208ENST00000494654 DNHD1Q96M86 4753 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 ABCA2Q9BZC7 2435 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 APCP25054 2843 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 A0A087WZ39 114 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 KRTAP23-1A1A580 65 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 K7EMT4 169 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms