RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 LOC107984156A0A0G2JMH3 177 aa7.23□□□□□ -1.25
CLCN6-208ENST00000494028 H3BMG7 143 aa7.23□□□□□ -1.25
CLCN6-208ENST00000494028 H7C2G1 150 aa7.23□□□□□ -1.25
CLCN6-208ENST00000494028 COX7A2LO14548 114 aa7.23□□□□□ -1.25
CLCN6-208ENST00000494028 RPL13AP40429 203 aaKnown RBP7.23□□□□□ -1.25
CLCN6-208ENST00000494028 ARL17AQ8IVW1 177 aa7.23□□□□□ -1.25
CLCN6-208ENST00000494028 COPS9Q8WXC6 57 aa7.23□□□□□ -1.25
CLCN6-208ENST00000494028 IBA57-AS1B1ANH7 110 aa7.22□□□□□ -1.25
CLCN6-208ENST00000494028 TRIAP1O43715 76 aa7.22□□□□□ -1.25
CLCN6-208ENST00000494028 TCL1BO95988 128 aa7.22□□□□□ -1.25
CLCN6-208ENST00000494028 KIAA0087Q14695 138 aa7.22□□□□□ -1.25
CLCN6-208ENST00000494028 Q1RN00 199 aa7.22□□□□□ -1.25
CLCN6-208ENST00000494028 MIR7-3HGQ8N6C7 128 aa7.22□□□□□ -1.25
CLCN6-208ENST00000494028 KLK12Q9UKR0 248 aa7.22□□□□□ -1.25
CLCN6-208ENST00000494028 GAGE12HA6NDE8 117 aa7.21□□□□□ -1.26
CLCN6-208ENST00000494028 CXCL5P42830 114 aa7.21□□□□□ -1.26
CLCN6-208ENST00000494028 ENHOQ6UWT2 76 aa7.21□□□□□ -1.26
CLCN6-208ENST00000494028 MTURNQ8N3F0 131 aa7.21□□□□□ -1.26
CLCN6-208ENST00000494028 HUWE1Q7Z6Z7 4374 aaKnown RBP7.2□□□□□ -1.26
CLCN6-208ENST00000494028 TRAV10A0A0B4J240 114 aa7.2□□□□□ -1.26
CLCN6-208ENST00000494028 TRBV30A0A0K0K1B3 111 aa7.2□□□□□ -1.26
CLCN6-208ENST00000494028 PSMB2P49721 201 aa7.2□□□□□ -1.26
CLCN6-208ENST00000494028 SPAG11BQ08648 103 aa7.2□□□□□ -1.26
CLCN6-208ENST00000494028 TRBV20-1A0A075B6N2 111 aa7.19□□□□□ -1.26
CLCN6-208ENST00000494028 CRPP02741 224 aa7.19□□□□□ -1.26
CLCN6-208ENST00000494028 SMCPP49901 116 aaPredicted RBP7.19□□□□□ -1.26
CLCN6-208ENST00000494028 ESRGQ1W209 222 aa7.19□□□□□ -1.26
CLCN6-208ENST00000494028 OCIAD2Q56VL3 154 aa7.19□□□□□ -1.26
CLCN6-208ENST00000494028 C2orf82Q6UX34 121 aa7.19□□□□□ -1.26
CLCN6-208ENST00000494028 MALP21145 153 aa7.18□□□□□ -1.26
CLCN6-208ENST00000494028 LINC00158P58513 81 aa7.18□□□□□ -1.26
CLCN6-208ENST00000494028 WFDC2Q14508 124 aa7.18□□□□□ -1.26
CLCN6-208ENST00000494028 C6orf226Q5I0X4 101 aa7.18□□□□□ -1.26
CLCN6-208ENST00000494028 CFAP161Q6P656 301 aa7.18□□□□□ -1.26
CLCN6-208ENST00000494028 KRTAP26-1Q6PEX3 210 aa7.18□□□□□ -1.26
CLCN6-208ENST00000494028 MRAPQ8TCY5 172 aa7.18□□□□□ -1.26
CLCN6-208ENST00000494028 UBE2WQ96B02 151 aa7.18□□□□□ -1.26
CLCN6-208ENST00000494028 MEGF8Q7Z7M0 2845 aa7.18□□□□□ -1.26
CLCN6-208ENST00000494028 IGKV2-28A0A075B6P5 120 aa7.17□□□□□ -1.26
CLCN6-208ENST00000494028 F8W1H4 67 aa7.17□□□□□ -1.26
CLCN6-208ENST00000494028 IGKV2D-28P01615 120 aa7.17□□□□□ -1.26
CLCN6-208ENST00000494028 PFN2P35080 140 aa7.17□□□□□ -1.26
CLCN6-208ENST00000494028 CCL18P55774 89 aa7.17□□□□□ -1.26
CLCN6-208ENST00000494028 LINC01556Q5JQF7 62 aa7.17□□□□□ -1.26
CLCN6-208ENST00000494028 C15orf53Q8NAA6 179 aa7.17□□□□□ -1.26
CLCN6-208ENST00000494028 SND1-IT1Q9HBX3 110 aa7.17□□□□□ -1.26
CLCN6-208ENST00000494028 TRAV8-4A0A0B4J246 113 aa7.16□□□□□ -1.26
CLCN6-208ENST00000494028 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
CLCN6-208ENST00000494028 CKS1BP61024 79 aa7.16□□□□□ -1.26
CLCN6-208ENST00000494028 DEFB121Q5J5C9 76 aa7.16□□□□□ -1.26
CLCN6-208ENST00000494028 KLK5Q9Y337 293 aaPredicted RBP7.16□□□□□ -1.26
CLCN6-208ENST00000494028 ATXN8Q156A1 80 aa7.15□□□□□ -1.26
CLCN6-208ENST00000494028 LINC00337Q8N6G1 96 aa7.15□□□□□ -1.26
CLCN6-208ENST00000494028 K7ERU9 68 aa7.14□□□□□ -1.27
CLCN6-208ENST00000494028 DNAH10OSP0CZ25 163 aa7.14□□□□□ -1.27
CLCN6-208ENST00000494028 LINC01620Q4KN68 170 aa7.14□□□□□ -1.27
CLCN6-208ENST00000494028 TRAV13-2A0A0B4J235 113 aa7.13□□□□□ -1.27
CLCN6-208ENST00000494028 C9JAW5 83 aa7.13□□□□□ -1.27
CLCN6-208ENST00000494028 LST1O00453 97 aa7.13□□□□□ -1.27
CLCN6-208ENST00000494028 C10orf25Q5T742 122 aa7.13□□□□□ -1.27
CLCN6-208ENST00000494028 LCE2DQ5TA82 110 aaPredicted RBP7.13□□□□□ -1.27
CLCN6-208ENST00000494028 C6orf223Q8N319 242 aa7.13□□□□□ -1.27
CLCN6-208ENST00000494028 CLEC2BQ92478 149 aa7.13□□□□□ -1.27
CLCN6-208ENST00000494028 FBN3Q75N90 2809 aa7.12□□□□□ -1.27
CLCN6-208ENST00000494028 M0QXV9 152 aa7.12□□□□□ -1.27
CLCN6-208ENST00000494028 COX17Q14061 63 aa7.12□□□□□ -1.27
CLCN6-208ENST00000494028 ETDBQ3ZM63 59 aa7.12□□□□□ -1.27
CLCN6-208ENST00000494028 C15orf56Q8N910 161 aa7.12□□□□□ -1.27
CLCN6-208ENST00000494028 LINC00526Q96FQ7 95 aa7.12□□□□□ -1.27
CLCN6-208ENST00000494028 LINC00588Q9Y4M8 146 aa7.12□□□□□ -1.27
CLCN6-208ENST00000494028 GVQW2A0A096LPI5 108 aaPredicted RBP7.11□□□□□ -1.27
CLCN6-208ENST00000494028 SLC25A20O43772 301 aa7.11□□□□□ -1.27
CLCN6-208ENST00000494028 COX6CP09669 75 aa7.11□□□□□ -1.27
CLCN6-208ENST00000494028 C9orf116Q5BN46 136 aaPredicted RBP7.11□□□□□ -1.27
CLCN6-208ENST00000494028 UNQ6190/PRO20217Q6UXQ8 127 aa7.11□□□□□ -1.27
CLCN6-208ENST00000494028 ANKRD29Q8N6D5 301 aa7.11□□□□□ -1.27
CLCN6-208ENST00000494028 NTN5Q8WTR8 489 aaPredicted RBP7.11□□□□□ -1.27
CLCN6-208ENST00000494028 LINC01600Q96MT4 127 aa7.11□□□□□ -1.27
CLCN6-208ENST00000494028 B9D2Q9BPU9 175 aa7.11□□□□□ -1.27
CLCN6-208ENST00000494028 RPL28P46779 137 aaKnown RBP7.1□□□□□ -1.27
CLCN6-208ENST00000494028 RNF151Q2KHN1 245 aa7.1□□□□□ -1.27
CLCN6-208ENST00000494028 Q8NDZ9 215 aa7.1□□□□□ -1.27
CLCN6-208ENST00000494028 MUC7Q8TAX7 377 aa7.1□□□□□ -1.27
CLCN6-208ENST00000494028 C1orf43Q9BWL3 253 aa7.1□□□□□ -1.27
CLCN6-208ENST00000494028 C6orf48Q9UBA6 75 aa7.1□□□□□ -1.27
CLCN6-208ENST00000494028 DNAH9Q9NYC9 4486 aa7.09□□□□□ -1.27
CLCN6-208ENST00000494028 TRBV10-2A0A0K0K1G8 114 aa7.09□□□□□ -1.27
CLCN6-208ENST00000494028 NDUFC2O95298 119 aa7.09□□□□□ -1.27
CLCN6-208ENST00000494028 HIGD2BQ4VC39 106 aa7.09□□□□□ -1.27
CLCN6-208ENST00000494028 TEN1Q86WV5 123 aa7.09□□□□□ -1.27
CLCN6-208ENST00000494028 UPK3BQ9BT76 320 aa7.09□□□□□ -1.27
CLCN6-208ENST00000494028 H3BT86 120 aa7.08□□□□□ -1.28
CLCN6-208ENST00000494028 SMIM11BQ8TCY0 68 aa7.08□□□□□ -1.28
CLCN6-208ENST00000494028 PRKDCP78527 4128 aaKnown RBP7.08□□□□□ -1.28
CLCN6-208ENST00000494028 IGKV2D-24A0A075B6R9 120 aa7.07□□□□□ -1.28
CLCN6-208ENST00000494028 FAM218AQ96MZ4 157 aa7.07□□□□□ -1.28
CLCN6-208ENST00000494028 Q9HAA7 133 aa7.07□□□□□ -1.28
CLCN6-208ENST00000494028 Q6ZRU5 148 aa7.06□□□□□ -1.28
CLCN6-208ENST00000494028 PPDPFLQ8WWR9 84 aa7.06□□□□□ -1.28
CLCN6-208ENST00000494028 C2orf48Q96LS8 159 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms