RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 NDUFS5O43920 106 aa4.69□□□□□ -1.66
FNDC3B-212ENST00000494000 KRTAP21-3Q3LHN1 58 aa4.69□□□□□ -1.66
FNDC3B-212ENST00000494000 TMEM243Q9BU79 118 aa4.69□□□□□ -1.66
FNDC3B-212ENST00000494000 HIGD1BQ9P298 99 aa4.69□□□□□ -1.66
FNDC3B-212ENST00000494000 ATRQ13535 2644 aa4.68□□□□□ -1.66
FNDC3B-212ENST00000494000 NIPBLQ6KC79 2804 aaeCLIP4.68□□□□□ -1.66
FNDC3B-212ENST00000494000 TRAV13-1A0A0B4J241 112 aa4.68□□□□□ -1.66
FNDC3B-212ENST00000494000 UBE2L6O14933 153 aa4.68□□□□□ -1.66
FNDC3B-212ENST00000494000 HERVK_113P61574 105 aa4.68□□□□□ -1.66
FNDC3B-212ENST00000494000 CEND1Q8N111 149 aa4.68□□□□□ -1.66
FNDC3B-212ENST00000494000 LINC00526Q96FQ7 95 aa4.68□□□□□ -1.66
FNDC3B-212ENST00000494000 AMELXQ99217 191 aa4.68□□□□□ -1.66
FNDC3B-212ENST00000494000 UBE2D4Q9Y2X8 147 aa4.68□□□□□ -1.66
FNDC3B-212ENST00000494000 JMJD1CQ15652 2540 aa4.67□□□□□ -1.66
FNDC3B-212ENST00000494000 IGLV4-3A0A075B6K6 122 aa4.67□□□□□ -1.66
FNDC3B-212ENST00000494000 UQCRQO14949 82 aa4.67□□□□□ -1.66
FNDC3B-212ENST00000494000 RPL39P62891 51 aaKnown RBP4.67□□□□□ -1.66
FNDC3B-212ENST00000494000 MRPL35Q9NZE8 188 aaKnown RBP4.67□□□□□ -1.66
FNDC3B-212ENST00000494000 TRAV8-3A0A0A6YYJ7 113 aa4.67□□□□□ -1.66
FNDC3B-212ENST00000494000 C6orf99Q4VX62 202 aa4.67□□□□□ -1.66
FNDC3B-212ENST00000494000 SBSPONQ8IVN8 264 aa4.67□□□□□ -1.66
FNDC3B-212ENST00000494000 C15orf53Q8NAA6 179 aa4.67□□□□□ -1.66
FNDC3B-212ENST00000494000 CHAC1Q9BUX1 264 aa4.67□□□□□ -1.66
FNDC3B-212ENST00000494000 TRBV6-8A0A0A6YYG3 113 aa4.66□□□□□ -1.66
FNDC3B-212ENST00000494000 C11orf86A6NJI1 115 aa4.66□□□□□ -1.66
FNDC3B-212ENST00000494000 LST1O00453 97 aa4.66□□□□□ -1.66
FNDC3B-212ENST00000494000 FP248Q71RG6 208 aaPredicted RBP4.66□□□□□ -1.66
FNDC3B-212ENST00000494000 ICOSQ9Y6W8 199 aa4.66□□□□□ -1.66
FNDC3B-212ENST00000494000 IGHV3-38A0A0C4DH36 116 aa4.66□□□□□ -1.66
FNDC3B-212ENST00000494000 M0R378 163 aa4.66□□□□□ -1.66
FNDC3B-212ENST00000494000 PRR15Q8IV56 129 aa4.66□□□□□ -1.66
FNDC3B-212ENST00000494000 TENM1Q9UKZ4 2725 aa4.65□□□□□ -1.66
FNDC3B-212ENST00000494000 H0Y9J4 135 aa4.65□□□□□ -1.66
FNDC3B-212ENST00000494000 K7EIL1 84 aa4.65□□□□□ -1.66
FNDC3B-212ENST00000494000 CHCHD10Q8WYQ3 142 aaPredicted RBP4.65□□□□□ -1.66
FNDC3B-212ENST00000494000 KRTAP17-1Q9BYP8 105 aa4.65□□□□□ -1.66
FNDC3B-212ENST00000494000 FBN1P35555 2871 aaKnown RBP4.65□□□□□ -1.66
FNDC3B-212ENST00000494000 A0A1B0GUV1 79 aa4.65□□□□□ -1.67
FNDC3B-212ENST00000494000 TCL1BO95988 128 aa4.65□□□□□ -1.67
FNDC3B-212ENST00000494000 PSMB2P49721 201 aa4.65□□□□□ -1.67
FNDC3B-212ENST00000494000 NTM-AS1Q6ZSK4 140 aa4.65□□□□□ -1.67
FNDC3B-212ENST00000494000 CELA1Q9UNI1 258 aa4.65□□□□□ -1.67
FNDC3B-212ENST00000494000 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.64□□□□□ -1.67
FNDC3B-212ENST00000494000 IGKV2-29A2NJV5 120 aaPredicted RBP4.64□□□□□ -1.67
FNDC3B-212ENST00000494000 DEFB121Q5J5C9 76 aa4.64□□□□□ -1.67
FNDC3B-212ENST00000494000 IGLV4-69A0A075B6H9 119 aa4.64□□□□□ -1.67
FNDC3B-212ENST00000494000 DEFB4AO15263 64 aa4.64□□□□□ -1.67
FNDC3B-212ENST00000494000 ZNF73O43830 326 aaPredicted RBP4.64□□□□□ -1.67
FNDC3B-212ENST00000494000 CIRBPQ14011 172 aaKnown RBP4.64□□□□□ -1.67
FNDC3B-212ENST00000494000 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
FNDC3B-212ENST00000494000 VSIG2Q96IQ7 327 aa4.64□□□□□ -1.67
FNDC3B-212ENST00000494000 hADV29S1A0JD25 119 aa4.63□□□□□ -1.67
FNDC3B-212ENST00000494000 SCGB1C2P0DMR2 95 aa4.63□□□□□ -1.67
FNDC3B-212ENST00000494000 CDC42SE2Q9NRR3 84 aa4.63□□□□□ -1.67
FNDC3B-212ENST00000494000 CRYGAP11844 174 aa4.63□□□□□ -1.67
FNDC3B-212ENST00000494000 LELP1Q5T871 98 aa4.63□□□□□ -1.67
FNDC3B-212ENST00000494000 TRAV10A0A0B4J240 114 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 A0A0J9YWU9 116 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 TRBV7-7A0A0K0K1E9 115 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 UBE2D1P51668 147 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 TMEM170BQ5T4T1 132 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 B9D2Q9BPU9 175 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 IGLV5-45A0A087WSX0 123 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 A0A0J9YXV3 536 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 TMEM256-PLSCR3K7ERE1 68 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 LEPROTO15243 131 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 VWFP04275 2813 aa4.62□□□□□ -1.67
FNDC3B-212ENST00000494000 TMEM223A0PJW6 202 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 TRACP01848 142 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 HTN3P15516 51 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 TMEM258P61165 79 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 S100A7L2Q5SY68 101 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 DEFB104AQ8WTQ1 72 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 FAM104AQ969W3 186 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 TTTY13Q9BZ97 58 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 DEFB131BA0A096LNP1 70 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 IGKV2D-26A0A0A0MRZ7 120 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 A0A0J9YY99 117 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 COX7CP15954 63 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 ZNF22P17026 224 aaPredicted RBP4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 OPRPNQ99935 248 aaPredicted RBP4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 SPANXDQ9BXN6 97 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 NOTCH3Q9UM47 2321 aa4.61□□□□□ -1.67
FNDC3B-212ENST00000494000 A0A096LPF7 62 aa4.6□□□□□ -1.67
FNDC3B-212ENST00000494000 LOC107984156A0A0G2JMH3 177 aa4.6□□□□□ -1.67
FNDC3B-212ENST00000494000 MYMXA0A1B0GTQ4 84 aa4.6□□□□□ -1.67
FNDC3B-212ENST00000494000 CEMP1Q6PRD7 247 aaPredicted RBP4.6□□□□□ -1.67
FNDC3B-212ENST00000494000 ARL17AQ8IVW1 177 aa4.6□□□□□ -1.67
FNDC3B-212ENST00000494000 LGALS3P17931 250 aaKnown RBP4.6□□□□□ -1.67
FNDC3B-212ENST00000494000 Q6ZTC4 211 aa4.6□□□□□ -1.67
FNDC3B-212ENST00000494000 LINC00474Q9P2X8 69 aa4.6□□□□□ -1.67
FNDC3B-212ENST00000494000 IGHV1-58A0A0C4DH39 117 aa4.59□□□□□ -1.67
FNDC3B-212ENST00000494000 PRR3P79522 188 aaKnown RBP4.59□□□□□ -1.67
FNDC3B-212ENST00000494000 SFTA2Q6UW10 78 aa4.59□□□□□ -1.67
FNDC3B-212ENST00000494000 LCE2BO14633 110 aa4.59□□□□□ -1.67
FNDC3B-212ENST00000494000 MP68P56378 58 aa4.59□□□□□ -1.67
FNDC3B-212ENST00000494000 LYPD5Q6UWN5 251 aa4.59□□□□□ -1.67
FNDC3B-212ENST00000494000 HIST1H4GQ99525 98 aa4.59□□□□□ -1.67
FNDC3B-212ENST00000494000 IMUPQ9GZP8 106 aa4.59□□□□□ -1.67
FNDC3B-212ENST00000494000 MAST4O15021 2626 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms