RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 TRACP01848 142 aa7.56□□□□□ -1.2
PDLIM1-205ENST00000493949 HERVK_113P63121 156 aa7.56□□□□□ -1.2
PDLIM1-205ENST00000493949 HERV-K104P63124 156 aa7.56□□□□□ -1.2
PDLIM1-205ENST00000493949 CEMP1Q6PRD7 247 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1-205ENST00000493949 C15orf53Q8NAA6 179 aa7.56□□□□□ -1.2
PDLIM1-205ENST00000493949 UBE2D4Q9Y2X8 147 aa7.56□□□□□ -1.2
PDLIM1-205ENST00000493949 CSDC2Q9Y534 153 aaKnown RBP7.56□□□□□ -1.2
PDLIM1-205ENST00000493949 TRAV4A0A0B4J268 109 aa7.55□□□□□ -1.2
PDLIM1-205ENST00000493949 COX7A2LO14548 114 aa7.55□□□□□ -1.2
PDLIM1-205ENST00000493949 IGHV3-53P01767 116 aa7.55□□□□□ -1.2
PDLIM1-205ENST00000493949 LINC00336Q6ZUF6 198 aa7.55□□□□□ -1.2
PDLIM1-205ENST00000493949 IGLV5-39A0A0G2JS06 123 aa7.54□□□□□ -1.2
PDLIM1-205ENST00000493949 INAFM2P0DMQ5 153 aa7.54□□□□□ -1.2
PDLIM1-205ENST00000493949 CXCL5P42830 114 aa7.54□□□□□ -1.2
PDLIM1-205ENST00000493949 DAND5Q8N907 189 aa7.54□□□□□ -1.2
PDLIM1-205ENST00000493949 KLK5Q9Y337 293 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1-205ENST00000493949 TEX49A0A1B0GTD5 131 aa7.53□□□□□ -1.2
PDLIM1-205ENST00000493949 SPRY2O43597 315 aa7.53□□□□□ -1.2
PDLIM1-205ENST00000493949 PRSS2P07478 247 aa7.53□□□□□ -1.2
PDLIM1-205ENST00000493949 DEFB1P60022 68 aa7.53□□□□□ -1.2
PDLIM1-205ENST00000493949 LINC00643Q86TS7 51 aa7.53□□□□□ -1.2
PDLIM1-205ENST00000493949 CHCHD7Q9BUK0 85 aa7.53□□□□□ -1.2
PDLIM1-205ENST00000493949 TRBV10-1A0A0K0K1A3 114 aa7.52□□□□□ -1.21
PDLIM1-205ENST00000493949 H7C2G1 150 aa7.52□□□□□ -1.21
PDLIM1-205ENST00000493949 SPINK13Q1W4C9 94 aa7.52□□□□□ -1.21
PDLIM1-205ENST00000493949 SDIM1Q6ZPB5 146 aa7.52□□□□□ -1.21
PDLIM1-205ENST00000493949 FAM104AQ969W3 186 aa7.52□□□□□ -1.21
PDLIM1-205ENST00000493949 IGKV3-7A0A075B6H7 116 aa7.51□□□□□ -1.21
PDLIM1-205ENST00000493949 B5MCH6 92 aa7.51□□□□□ -1.21
PDLIM1-205ENST00000493949 RS1O15537 224 aa7.51□□□□□ -1.21
PDLIM1-205ENST00000493949 PAX4O43316 350 aa7.51□□□□□ -1.21
PDLIM1-205ENST00000493949 OPRPNQ99935 248 aaPredicted RBP7.51□□□□□ -1.21
PDLIM1-205ENST00000493949 WFDC10AQ9H1F0 79 aa7.51□□□□□ -1.21
PDLIM1-205ENST00000493949 NACAE9PAV3 2078 aa7.51□□□□□ -1.21
PDLIM1-205ENST00000493949 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
PDLIM1-205ENST00000493949 PEMTQ9UBM1 199 aa7.5□□□□□ -1.21
PDLIM1-205ENST00000493949 IGHV3-64A0A075B6Q5 118 aa7.49□□□□□ -1.21
PDLIM1-205ENST00000493949 TRAV12-2A0A075B6T6 113 aa7.49□□□□□ -1.21
PDLIM1-205ENST00000493949 TRAV13-2A0A0B4J235 113 aa7.49□□□□□ -1.21
PDLIM1-205ENST00000493949 INSP01308 110 aa7.49□□□□□ -1.21
PDLIM1-205ENST00000493949 ADAMTSL4-AS1Q5T5F5 129 aa7.49□□□□□ -1.21
PDLIM1-205ENST00000493949 LINC00308Q8TCZ7 52 aa7.49□□□□□ -1.21
PDLIM1-205ENST00000493949 TRAV8-3A0A0A6YYJ7 113 aa7.48□□□□□ -1.21
PDLIM1-205ENST00000493949 DAZ2Q13117 558 aaKnown RBP7.48□□□□□ -1.21
PDLIM1-205ENST00000493949 DGAT2L7PQ6IED9 249 aa7.48□□□□□ -1.21
PDLIM1-205ENST00000493949 DAZ4Q86SG3 579 aaKnown RBP7.48□□□□□ -1.21
PDLIM1-205ENST00000493949 DAZ3Q9NR90 486 aaKnown RBP7.48□□□□□ -1.21
PDLIM1-205ENST00000493949 TRAV25A0A0B4J276 109 aa7.47□□□□□ -1.21
PDLIM1-205ENST00000493949 SS18L2Q9UHA2 77 aa7.47□□□□□ -1.21
PDLIM1-205ENST00000493949 A0A0J9YWU9 116 aa7.46□□□□□ -1.22
PDLIM1-205ENST00000493949 UQCRQO14949 82 aa7.46□□□□□ -1.22
PDLIM1-205ENST00000493949 C11orf72Q8NBR9 251 aa7.46□□□□□ -1.22
PDLIM1-205ENST00000493949 CDKN2A-AS1Q9UH64 79 aa7.46□□□□□ -1.22
PDLIM1-205ENST00000493949 EDN2P20800 178 aa7.45□□□□□ -1.22
PDLIM1-205ENST00000493949 RPL28P46779 137 aaKnown RBP7.45□□□□□ -1.22
PDLIM1-205ENST00000493949 CMC4P56277 68 aaPredicted RBP7.45□□□□□ -1.22
PDLIM1-205ENST00000493949 SYNJ2BPP57105 145 aa7.45□□□□□ -1.22
PDLIM1-205ENST00000493949 RPL36AP83881 106 aaKnown RBP7.45□□□□□ -1.22
PDLIM1-205ENST00000493949 MEIG1Q5JSS6 88 aa7.45□□□□□ -1.22
PDLIM1-205ENST00000493949 CLEC2BQ92478 149 aa7.45□□□□□ -1.22
PDLIM1-205ENST00000493949 RPL36ALQ969Q0 106 aaKnown RBP7.45□□□□□ -1.22
PDLIM1-205ENST00000493949 ZNF625Q96I27 306 aaPredicted RBP7.45□□□□□ -1.22
PDLIM1-205ENST00000493949 SMIM1B2RUZ4 78 aa7.44□□□□□ -1.22
PDLIM1-205ENST00000493949 H0YGX0 51 aa7.44□□□□□ -1.22
PDLIM1-205ENST00000493949 CCDC179H3BU77 68 aa7.44□□□□□ -1.22
PDLIM1-205ENST00000493949 GHRHP01286 108 aa7.44□□□□□ -1.22
PDLIM1-205ENST00000493949 IGKV3-20P01619 116 aa7.44□□□□□ -1.22
PDLIM1-205ENST00000493949 Q9H8V8 135 aa7.44□□□□□ -1.22
PDLIM1-205ENST00000493949 ATOX1O00244 68 aa7.43□□□□□ -1.22
PDLIM1-205ENST00000493949 RBMY1A1P0DJD3 496 aaKnown RBP7.43□□□□□ -1.22
PDLIM1-205ENST00000493949 RBMY1CP0DJD4 496 aa7.43□□□□□ -1.22
PDLIM1-205ENST00000493949 RBMY1FQ15415 496 aaKnown RBP7.43□□□□□ -1.22
PDLIM1-205ENST00000493949 LINC00242Q5T6M2 205 aa7.43□□□□□ -1.22
PDLIM1-205ENST00000493949 C5orf38Q86SI9 138 aa7.43□□□□□ -1.22
PDLIM1-205ENST00000493949 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
PDLIM1-205ENST00000493949 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.42□□□□□ -1.22
PDLIM1-205ENST00000493949 IGHV3OR16-12A0A075B7B8 117 aa7.42□□□□□ -1.22
PDLIM1-205ENST00000493949 A0A1B0GX51 115 aa7.42□□□□□ -1.22
PDLIM1-205ENST00000493949 IGKV2-29A2NJV5 120 aaPredicted RBP7.42□□□□□ -1.22
PDLIM1-205ENST00000493949 CRPP02741 224 aa7.42□□□□□ -1.22
PDLIM1-205ENST00000493949 DEFB131AP59861 70 aa7.42□□□□□ -1.22
PDLIM1-205ENST00000493949 C3orf22Q8N5N4 141 aa7.42□□□□□ -1.22
PDLIM1-205ENST00000493949 LINC00526Q96FQ7 95 aa7.42□□□□□ -1.22
PDLIM1-205ENST00000493949 K7EQD1 137 aa7.41□□□□□ -1.22
PDLIM1-205ENST00000493949 CDK2AP2O75956 126 aa7.41□□□□□ -1.22
PDLIM1-205ENST00000493949 LCE1DQ5T752 114 aa7.41□□□□□ -1.22
PDLIM1-205ENST00000493949 LINC01587Q99440 93 aa7.41□□□□□ -1.22
PDLIM1-205ENST00000493949 MAP6D1Q9H9H5 199 aa7.41□□□□□ -1.22
PDLIM1-205ENST00000493949 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
PDLIM1-205ENST00000493949 APOBP04114 4563 aaKnown RBP7.4□□□□□ -1.22
PDLIM1-205ENST00000493949 FAM236AA0A1B0GUQ0 79 aa7.4□□□□□ -1.22
PDLIM1-205ENST00000493949 FAM236BA0A1B0GV22 79 aa7.4□□□□□ -1.22
PDLIM1-205ENST00000493949 F5H768 121 aa7.4□□□□□ -1.22
PDLIM1-205ENST00000493949 RTL8CO15255 209 aa7.4□□□□□ -1.22
PDLIM1-205ENST00000493949 BAALC-AS2P0C853 105 aa7.4□□□□□ -1.22
PDLIM1-205ENST00000493949 HIST1H4AP62805 103 aaKnown RBP7.4□□□□□ -1.22
PDLIM1-205ENST00000493949 SRRM2Q9UQ35 2752 aaKnown RBP7.39□□□□□ -1.23
PDLIM1-205ENST00000493949 KNCNA6PVL3 124 aa7.39□□□□□ -1.23
PDLIM1-205ENST00000493949 DNAL4O96015 105 aa7.39□□□□□ -1.23
PDLIM1-205ENST00000493949 MALP21145 153 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms