RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 ADCYAP1P18509 176 aa14.36□□□□□ -0.11
RHBDD3-206ENST00000493894 TRAV9-1A0A075B6T8 112 aa14.35□□□□□ -0.11
RHBDD3-206ENST00000493894 KIAA1644Q3SXP7 199 aa14.35□□□□□ -0.11
RHBDD3-206ENST00000493894 UQCC3Q6UW78 93 aa14.35□□□□□ -0.11
RHBDD3-206ENST00000493894 PRR26Q8N8Z3 221 aa14.35□□□□□ -0.11
RHBDD3-206ENST00000493894 CDKN2A-AS1Q9UH64 79 aa14.35□□□□□ -0.11
RHBDD3-206ENST00000493894 F8VRH5 84 aa14.32□□□□□ -0.12
RHBDD3-206ENST00000493894 ERASQ7Z444 233 aa14.32□□□□□ -0.12
RHBDD3-206ENST00000493894 LINC00469Q8N7U9 141 aa14.32□□□□□ -0.12
RHBDD3-206ENST00000493894 TMEM218A2RU14 115 aa14.31□□□□□ -0.12
RHBDD3-206ENST00000493894 CXCL5P42830 114 aa14.31□□□□□ -0.12
RHBDD3-206ENST00000493894 SCGB3A1Q96QR1 104 aa14.31□□□□□ -0.12
RHBDD3-206ENST00000493894 S100PP25815 95 aa14.3□□□□□ -0.12
RHBDD3-206ENST00000493894 XAGE1AQ9HD64 81 aa14.3□□□□□ -0.12
RHBDD3-206ENST00000493894 IGLV1-50A0A075B6I6 118 aa14.29□□□□□ -0.12
RHBDD3-206ENST00000493894 LINC01549A6NIU2 74 aa14.28□□□□□ -0.12
RHBDD3-206ENST00000493894 SMIM1B2RUZ4 78 aa14.27□□□□□ -0.13
RHBDD3-206ENST00000493894 KRTAP1-4P0C5Y4 121 aa14.27□□□□□ -0.13
RHBDD3-206ENST00000493894 GNB1LQ9BYB4 327 aa14.27□□□□□ -0.13
RHBDD3-206ENST00000493894 C22orf24Q9Y442 160 aa14.27□□□□□ -0.13
RHBDD3-206ENST00000493894 TINCRA0A1B0GVN0 87 aa14.26□□□□□ -0.13
RHBDD3-206ENST00000493894 LBHQ53QV2 105 aaPredicted RBP14.26□□□□□ -0.13
RHBDD3-206ENST00000493894 NUPR1O60356 82 aa14.25□□□□□ -0.13
RHBDD3-206ENST00000493894 SEC11CQ9BY50 192 aa14.25□□□□□ -0.13
RHBDD3-206ENST00000493894 PDZD11Q5EBL8 140 aa14.24□□□□□ -0.13
RHBDD3-206ENST00000493894 IGLV5-45A0A087WSX0 123 aa14.23□□□□□ -0.13
RHBDD3-206ENST00000493894 LINC01546A6NGU7 62 aa14.23□□□□□ -0.13
RHBDD3-206ENST00000493894 COX19Q49B96 90 aa14.23□□□□□ -0.13
RHBDD3-206ENST00000493894 COX7B2Q8TF08 81 aa14.23□□□□□ -0.13
RHBDD3-206ENST00000493894 ZNF861PO60384 105 aa14.22□□□□□ -0.13
RHBDD3-206ENST00000493894 RPL13AP40429 203 aaKnown RBP14.22□□□□□ -0.13
RHBDD3-206ENST00000493894 TP73-AS1Q9UF72 201 aa14.22□□□□□ -0.13
RHBDD3-206ENST00000493894 IFITM2Q01629 132 aa14.21□□□□□ -0.13
RHBDD3-206ENST00000493894 FA2HQ7L5A8 372 aa14.21□□□□□ -0.13
RHBDD3-206ENST00000493894 MRPL55Q7Z7F7 128 aaKnown RBP14.21□□□□□ -0.13
RHBDD3-206ENST00000493894 SMCO4Q9NRQ5 59 aa14.21□□□□□ -0.13
RHBDD3-206ENST00000493894 CST9LQ9H4G1 147 aa14.2□□□□□ -0.14
RHBDD3-206ENST00000493894 PMVKQ15126 192 aa14.19□□□□□ -0.14
RHBDD3-206ENST00000493894 MRPL18Q9H0U6 180 aaKnown RBP14.19□□□□□ -0.14
RHBDD3-206ENST00000493894 SPINK8P0C7L1 97 aa14.18□□□□□ -0.14
RHBDD3-206ENST00000493894 FABP9Q0Z7S8 132 aa14.17□□□□□ -0.14
RHBDD3-206ENST00000493894 COMMD7Q86VX2 200 aa14.17□□□□□ -0.14
RHBDD3-206ENST00000493894 CARHSP1Q9Y2V2 147 aaKnown RBP14.17□□□□□ -0.14
RHBDD3-206ENST00000493894 H3BRM9 83 aa14.15□□□□□ -0.14
RHBDD3-206ENST00000493894 BCE1O60756 84 aa14.14□□□□□ -0.15
RHBDD3-206ENST00000493894 RHEBQ15382 184 aa14.14□□□□□ -0.15
RHBDD3-206ENST00000493894 RPL28P46779 137 aaKnown RBP14.13□□□□□ -0.15
RHBDD3-206ENST00000493894 RPS10P5Q9NQ39 176 aa14.13□□□□□ -0.15
RHBDD3-206ENST00000493894 ATP5LO75964 103 aa14.12□□□□□ -0.15
RHBDD3-206ENST00000493894 RAB5BP61020 215 aa14.12□□□□□ -0.15
RHBDD3-206ENST00000493894 LINC00167Q96N53 147 aa14.12□□□□□ -0.15
RHBDD3-206ENST00000493894 LPAP08519 4548 aa14.12□□□□□ -0.15
RHBDD3-206ENST00000493894 RPL37AP8A6NKH3 93 aa14.1□□□□□ -0.15
RHBDD3-206ENST00000493894 C10orf91Q5T1B1 145 aa14.1□□□□□ -0.15
RHBDD3-206ENST00000493894 IGLV5-37A0A075B6J1 123 aa14.09□□□□□ -0.15
RHBDD3-206ENST00000493894 GAGE10A6NGK3 116 aa14.09□□□□□ -0.15
RHBDD3-206ENST00000493894 IGLC3P0DOY3 106 aa14.09□□□□□ -0.15
RHBDD3-206ENST00000493894 NKAPP1Q8N9T2 125 aa14.09□□□□□ -0.15
RHBDD3-206ENST00000493894 NDUFA6P56556 154 aa14.08□□□□□ -0.16
RHBDD3-206ENST00000493894 A0A096LNJ9 63 aa14.06□□□□□ -0.16
RHBDD3-206ENST00000493894 IGLV5-39A0A0G2JS06 123 aa14.06□□□□□ -0.16
RHBDD3-206ENST00000493894 C18orf32Q8TCD1 76 aa14.05□□□□□ -0.16
RHBDD3-206ENST00000493894 TRAPPC1Q9Y5R8 145 aa14.05□□□□□ -0.16
RHBDD3-206ENST00000493894 HBDP02042 147 aa14.04□□□□□ -0.16
RHBDD3-206ENST00000493894 ZNF22P17026 224 aaPredicted RBP14.04□□□□□ -0.16
RHBDD3-206ENST00000493894 PFN2P35080 140 aa14.04□□□□□ -0.16
RHBDD3-206ENST00000493894 PRR4Q16378 134 aa14.04□□□□□ -0.16
RHBDD3-206ENST00000493894 LINC00614P0C842 121 aa14.03□□□□□ -0.16
RHBDD3-206ENST00000493894 UBE2AP49459 152 aa14.03□□□□□ -0.16
RHBDD3-206ENST00000493894 URB1-AS1Q96HZ7 61 aa14.03□□□□□ -0.16
RHBDD3-206ENST00000493894 A0A087X002 238 aa14.02□□□□□ -0.17
RHBDD3-206ENST00000493894 CRYGAP11844 174 aa14.01□□□□□ -0.17
RHBDD3-206ENST00000493894 ERG28Q9UKR5 140 aa14.01□□□□□ -0.17
RHBDD3-206ENST00000493894 IGKV2-28A0A075B6P5 120 aa14□□□□□ -0.17
RHBDD3-206ENST00000493894 IGKV2D-28P01615 120 aa14□□□□□ -0.17
RHBDD3-206ENST00000493894 PMCHL1Q16048 86 aa14□□□□□ -0.17
RHBDD3-206ENST00000493894 TYMSOSQ8TAI1 123 aa13.99□□□□□ -0.17
RHBDD3-206ENST00000493894 SCO1O75880 301 aa13.98□□□□□ -0.17
RHBDD3-206ENST00000493894 KRTAP13-1Q8IUC0 172 aa13.98□□□□□ -0.17
RHBDD3-206ENST00000493894 SND1-IT1Q9HBX3 110 aa13.98□□□□□ -0.17
RHBDD3-206ENST00000493894 TSPAN13O95857 204 aa13.97□□□□□ -0.17
RHBDD3-206ENST00000493894 COX17Q14061 63 aa13.97□□□□□ -0.17
RHBDD3-206ENST00000493894 SFTA2Q6UW10 78 aa13.97□□□□□ -0.17
RHBDD3-206ENST00000493894 C11orf86A6NJI1 115 aa13.96□□□□□ -0.17
RHBDD3-206ENST00000493894 VPREB1P12018 145 aa13.96□□□□□ -0.17
RHBDD3-206ENST00000493894 TMEM170BQ5T4T1 132 aa13.96□□□□□ -0.17
RHBDD3-206ENST00000493894 BAGE3Q86Y29 109 aa13.96□□□□□ -0.17
RHBDD3-206ENST00000493894 APOC3P02656 99 aa13.95□□□□□ -0.18
RHBDD3-206ENST00000493894 ZNF625Q96I27 306 aaPredicted RBP13.95□□□□□ -0.18
RHBDD3-206ENST00000493894 RPL24P83731 157 aaKnown RBP13.94□□□□□ -0.18
RHBDD3-206ENST00000493894 NDUFA5Q16718 116 aa13.93□□□□□ -0.18
RHBDD3-206ENST00000493894 ANAPC11Q9NYG5 84 aa13.93□□□□□ -0.18
RHBDD3-206ENST00000493894 SNAPINO95295 136 aa13.92□□□□□ -0.18
RHBDD3-206ENST00000493894 TMEM126AQ9H061 195 aa13.92□□□□□ -0.18
RHBDD3-206ENST00000493894 PRLHP81277 87 aa13.91□□□□□ -0.18
RHBDD3-206ENST00000493894 FAM229BQ4G0N7 80 aa13.91□□□□□ -0.18
RHBDD3-206ENST00000493894 SVBPQ8N300 66 aa13.91□□□□□ -0.18
RHBDD3-206ENST00000493894 FAM19A1Q7Z5A9 133 aa13.9□□□□□ -0.18
RHBDD3-206ENST00000493894 CHTOPQ9Y3Y2 248 aaKnown RBP13.9□□□□□ -0.18
RHBDD3-206ENST00000493894 TMEM238C9JI98 176 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms