RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 X6R8D5 127 aa9.7□□□□□ -0.86
VCP-207ENST00000493886 DEFB130BP0DP73 79 aa9.7□□□□□ -0.86
VCP-207ENST00000493886 DEFB130AP0DP74 79 aa9.7□□□□□ -0.86
VCP-207ENST00000493886 COX7CP15954 63 aa9.7□□□□□ -0.86
VCP-207ENST00000493886 TMEM243Q9BU79 118 aa9.7□□□□□ -0.86
VCP-207ENST00000493886 Q9H8V8 135 aa9.7□□□□□ -0.86
VCP-207ENST00000493886 BRK1Q8WUW1 75 aa9.69□□□□□ -0.86
VCP-207ENST00000493886 IGLV5-45A0A087WSX0 123 aa9.69□□□□□ -0.86
VCP-207ENST00000493886 LINC00612Q8N6U2 182 aa9.69□□□□□ -0.86
VCP-207ENST00000493886 SPANXDQ9BXN6 97 aa9.69□□□□□ -0.86
VCP-207ENST00000493886 SPANXCQ9NY87 97 aa9.69□□□□□ -0.86
VCP-207ENST00000493886 TRBV30A0A0K0K1B3 111 aa9.69□□□□□ -0.86
VCP-207ENST00000493886 C2orf82Q6UX34 121 aa9.69□□□□□ -0.86
VCP-207ENST00000493886 TENM1Q9UKZ4 2725 aa9.68□□□□□ -0.86
VCP-207ENST00000493886 UBE2L6O14933 153 aa9.68□□□□□ -0.86
VCP-207ENST00000493886 CDC42SE2Q9NRR3 84 aa9.68□□□□□ -0.86
VCP-207ENST00000493886 CRYGAP11844 174 aa9.68□□□□□ -0.86
VCP-207ENST00000493886 LINC00242Q5T6M2 205 aa9.68□□□□□ -0.86
VCP-207ENST00000493886 IGKV3OR2-268A0A0C4DH90 116 aa9.67□□□□□ -0.86
VCP-207ENST00000493886 TMEM258P61165 79 aa9.67□□□□□ -0.86
VCP-207ENST00000493886 FAM19A3Q7Z5A8 133 aa9.67□□□□□ -0.86
VCP-207ENST00000493886 FAM19A1Q7Z5A9 133 aa9.67□□□□□ -0.86
VCP-207ENST00000493886 TRBV7-7A0A0K0K1E9 115 aa9.66□□□□□ -0.86
VCP-207ENST00000493886 TRBV10-2A0A0K0K1G8 114 aa9.66□□□□□ -0.86
VCP-207ENST00000493886 ATRQ13535 2644 aa9.66□□□□□ -0.86
VCP-207ENST00000493886 H7C423 109 aa9.66□□□□□ -0.86
VCP-207ENST00000493886 COX6CP09669 75 aa9.66□□□□□ -0.86
VCP-207ENST00000493886 UBE2WQ96B02 151 aa9.66□□□□□ -0.86
VCP-207ENST00000493886 DEFB135Q30KP9 77 aa9.65□□□□□ -0.86
VCP-207ENST00000493886 TEP1Q99973 2627 aaKnown RBP9.65□□□□□ -0.86
VCP-207ENST00000493886 NDUFA1O15239 70 aa9.65□□□□□ -0.87
VCP-207ENST00000493886 APOC4P55056 127 aa9.65□□□□□ -0.87
VCP-207ENST00000493886 WFDC9Q8NEX5 89 aa9.65□□□□□ -0.87
VCP-207ENST00000493886 TRBV6-8A0A0A6YYG3 113 aa9.64□□□□□ -0.87
VCP-207ENST00000493886 PRIMA1Q86XR5 153 aa9.64□□□□□ -0.87
VCP-207ENST00000493886 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
VCP-207ENST00000493886 LINC00308Q8TCZ7 52 aa9.63□□□□□ -0.87
VCP-207ENST00000493886 SMIM1B2RUZ4 78 aa9.63□□□□□ -0.87
VCP-207ENST00000493886 SOSTDC1Q6X4U4 206 aa9.63□□□□□ -0.87
VCP-207ENST00000493886 F8P00451 2351 aa9.63□□□□□ -0.87
VCP-207ENST00000493886 IGLV5-39A0A0G2JS06 123 aa9.62□□□□□ -0.87
VCP-207ENST00000493886 CIRBPQ14011 172 aaKnown RBP9.62□□□□□ -0.87
VCP-207ENST00000493886 LYRM9A8MSI8 78 aa9.62□□□□□ -0.87
VCP-207ENST00000493886 GYPEP15421 78 aa9.62□□□□□ -0.87
VCP-207ENST00000493886 LST1O00453 97 aa9.61□□□□□ -0.87
VCP-207ENST00000493886 DEFB4AO15263 64 aa9.61□□□□□ -0.87
VCP-207ENST00000493886 TOMM7Q9P0U1 55 aa9.61□□□□□ -0.87
VCP-207ENST00000493886 PRO0255Q9UI72 69 aa9.61□□□□□ -0.87
VCP-207ENST00000493886 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
VCP-207ENST00000493886 IGHV4-28A0A0C4DH34 117 aa9.6□□□□□ -0.87
VCP-207ENST00000493886 TIMM17BO60830 172 aa9.59□□□□□ -0.87
VCP-207ENST00000493886 IGHV4-30-4P0DP06 118 aa9.58□□□□□ -0.88
VCP-207ENST00000493886 PAX4O43316 350 aa9.57□□□□□ -0.88
VCP-207ENST00000493886 H3BT86 120 aa9.57□□□□□ -0.88
VCP-207ENST00000493886 Q8NAQ8 132 aa9.57□□□□□ -0.88
VCP-207ENST00000493886 TRRAPQ9Y4A5 3859 aa9.57□□□□□ -0.88
VCP-207ENST00000493886 MIFP14174 115 aa9.56□□□□□ -0.88
VCP-207ENST00000493886 DAD1P61803 113 aa9.56□□□□□ -0.88
VCP-207ENST00000493886 FLNBO75369 2602 aaKnown RBP9.56□□□□□ -0.88
VCP-207ENST00000493886 A0A096LPF7 62 aa9.55□□□□□ -0.88
VCP-207ENST00000493886 C11orf68Q9H3H3 251 aaKnown RBP9.55□□□□□ -0.88
VCP-207ENST00000493886 CELA1Q9UNI1 258 aa9.55□□□□□ -0.88
VCP-207ENST00000493886 KRTAP24-1Q3LI83 254 aa9.54□□□□□ -0.88
VCP-207ENST00000493886 IMUPQ9GZP8 106 aa9.54□□□□□ -0.88
VCP-207ENST00000493886 PMAIP1Q13794 54 aa9.53□□□□□ -0.88
VCP-207ENST00000493886 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
VCP-207ENST00000493886 COX7A2LO14548 114 aa9.53□□□□□ -0.88
VCP-207ENST00000493886 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
VCP-207ENST00000493886 ATP5G1P05496 136 aa9.52□□□□□ -0.88
VCP-207ENST00000493886 MIR7-3HGQ8N6C7 128 aa9.52□□□□□ -0.88
VCP-207ENST00000493886 IGHV3OR16-9A0A0B4J2B5 98 aa9.52□□□□□ -0.89
VCP-207ENST00000493886 A0A1B0GUV1 79 aa9.52□□□□□ -0.89
VCP-207ENST00000493886 Q9HAA7 133 aa9.52□□□□□ -0.89
VCP-207ENST00000493886 SPART-AS1P0CW21 52 aa9.52□□□□□ -0.89
VCP-207ENST00000493886 LINC00959A0A1B0GUT2 108 aa9.51□□□□□ -0.89
VCP-207ENST00000493886 SS18Q15532 418 aa9.51□□□□□ -0.89
VCP-207ENST00000493886 C5orf38Q86SI9 138 aa9.51□□□□□ -0.89
VCP-207ENST00000493886 SMCR5Q8TEV8 140 aa9.51□□□□□ -0.89
VCP-207ENST00000493886 COX7B2Q8TF08 81 aa9.51□□□□□ -0.89
VCP-207ENST00000493886 CLPSL2Q6UWE3 100 aa9.5□□□□□ -0.89
VCP-207ENST00000493886 LINC00158P58513 81 aa9.5□□□□□ -0.89
VCP-207ENST00000493886 LINC01600Q96MT4 127 aa9.5□□□□□ -0.89
VCP-207ENST00000493886 A0A087WZ39 114 aa9.49□□□□□ -0.89
VCP-207ENST00000493886 ATOX1O00244 68 aa9.49□□□□□ -0.89
VCP-207ENST00000493886 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
VCP-207ENST00000493886 LINC00337Q8N6G1 96 aa9.49□□□□□ -0.89
VCP-207ENST00000493886 HTN3P15516 51 aa9.49□□□□□ -0.89
VCP-207ENST00000493886 CRPP02741 224 aa9.48□□□□□ -0.89
VCP-207ENST00000493886 SND1-IT1Q9HBX3 110 aa9.48□□□□□ -0.89
VCP-207ENST00000493886 UPK3BQ9BT76 320 aa9.48□□□□□ -0.89
VCP-207ENST00000493886 BAALC-AS2P0C853 105 aa9.47□□□□□ -0.89
VCP-207ENST00000493886 COPS9Q8WXC6 57 aa9.47□□□□□ -0.89
VCP-207ENST00000493886 FAM240AA0A1B0GVK7 77 aa9.47□□□□□ -0.89
VCP-207ENST00000493886 NDUFC2O95298 119 aa9.47□□□□□ -0.89
VCP-207ENST00000493886 FP248Q71RG6 208 aaPredicted RBP9.47□□□□□ -0.89
VCP-207ENST00000493886 XCL1P47992 114 aa9.46□□□□□ -0.89
VCP-207ENST00000493886 IGKV2-28A0A075B6P5 120 aa9.46□□□□□ -0.9
VCP-207ENST00000493886 IGKV2D-28P01615 120 aa9.46□□□□□ -0.9
VCP-207ENST00000493886 C11orf45Q8TAV5 145 aa9.45□□□□□ -0.9
VCP-207ENST00000493886 EGFEM1PQ0D2K5 195 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms